Gcaud9188.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9188.t1
Unique NameGcaud9188.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length667
Homology
BLAST of Gcaud9188.t1 vs. uniprot
Match: A0A2V3IKV0_9FLOR (Mannosyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKV0_9FLOR)

HSP 1 Score: 967 bits (2500), Expect = 0.000e+0
Identity = 483/593 (81.45%), Postives = 537/593 (90.56%), Query Frame = 0
Query:   50 LGAPVLRTFLSSPLYFLFVAIRFALIF-TPAILEGIEFDEGVDSLAVTLLPHMNSAGLDPAVLAPASGMTAQSNCTRSIVGAFVSSGIPYMGANIVCNQLLDGCKPQWMGFIAMIAPRVWMFLLSFITDLFLLRIFAVYEGENALSALLTYSSLWTTLLAMTRNSNFALETMCLTIIVAACFGWPINTARPLFWLSAFALSLGIFLRPAFAFFAITPVLFLSNLWGKNGLQPLRYVRGAMEGIAIFAFWCTIWITVDSVYFGTFKLRFGNTFITGFDMFVEYATKGLPFSYKGKLIYTPINAMKQVLSRSYISTMAMHTSPGQMFLSLPAILGPFFIVLMRESYEGMKVAMKELMTELKQVANAKKAKKKKGRKAGMTKELEDELYVYFDTIQTTFLLGLLVEVIQNNDRLGTISLLSLMPVCVVCLASTLFGPSSSKRFRMLNLAFTAAMVLFYGFFNQSGIPRVMLKVGAGGIESIPQNADLIMFKGVIGHRSLLGPNMKNVSIHDAGDSRLKLMTTLRDLKSQDGYREELLFVCAPATVDMKDEEFELVDTLAYGHMAVQQLPNNIDDAFKKSSLLMYKFIGDEDEAIIR 641
            LGA   +T  SSPLYFLFV  RF  IF TPA+LEGIEFDEGVDSLAV+LLPH+ S  LDPA L P +GM+   N TRSIVGAF+SSGIPYM +N+VCN++ DGC+P WMG+IAMI PR+WMF+LS ITD+ L+R FAVYEGENALSALLTYSSLWTTLLAMTRN+NFALE MCLT ++AACFGWPINTARPLFWLSA ALSLGIFLRPAFAFF + PVL+LSNL+GK+GL  LRYVR A+EGIA+FAFW TIWITVDSVYFGTFKLRFGNT +T FDMFVEYA  GLPFSYKGKL+YTPINAMKQVL+R YIST+AM+TSPGQMFLSLPAILGP FIVL+RESYEG+KVAMKELMTELKQVANAKKAK+KK +K GMTKELEDELYVYFDT+QTTFLLGLLVEV QNN RLGTISLLSLMPVCV+CLASTLFGP+SSKRFRM NLAFTAAMVLFYGFFNQSGIPR++LKVG GGI+SIPQNA+L+M+KGVIGHR+LLGPN+KNVSIHDAGDSRL LMTTLRDLK +DGYREE +FVCAPATVDMK++EF LVDTLA+ HMAV +LPNNIDDA KKSSLLMY+F+GDE EAIIR
Sbjct:   61 LGASTFKTLFSSPLYFLFVLCRFLFIFITPAVLEGIEFDEGVDSLAVSLLPHIKSDRLDPATLIPPTGMSLADNYTRSIVGAFISSGIPYMASNLVCNRVFDGCQPAWMGYIAMIVPRIWMFMLSLITDILLVRAFAVYEGENALSALLTYSSLWTTLLAMTRNTNFALEAMCLTAVIAACFGWPINTARPLFWLSATALSLGIFLRPAFAFFVVVPVLYLSNLYGKSGLYTLRYVRAALEGIAVFAFWTTIWITVDSVYFGTFKLRFGNTVMTSFDMFVEYAFTGLPFSYKGKLVYTPINAMKQVLNRRYISTLAMNTSPGQMFLSLPAILGPLFIVLLRESYEGLKVAMKELMTELKQVANAKKAKRKKSKKPGMTKELEDELYVYFDTMQTTFLLGLLVEVTQNNTRLGTISLLSLMPVCVICLASTLFGPNSSKRFRMFNLAFTAAMVLFYGFFNQSGIPRLLLKVGNGGIDSIPQNAELVMYKGVIGHRALLGPNLKNVSIHDAGDSRLTLMTTLRDLKGRDGYREERMFVCAPATVDMKEDEFVLVDTLAHAHMAVPKLPNNIDDALKKSSLLMYRFVGDEHEAIIR 653          
BLAST of Gcaud9188.t1 vs. uniprot
Match: R7QTC3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTC3_CHOCR)

HSP 1 Score: 570 bits (1469), Expect = 2.030e-197
Identity = 272/371 (73.32%), Postives = 325/371 (87.60%), Query Frame = 0
Query:  271 NLWGKNGLQPLRYVRGAMEGIAIFAFWCTIWITVDSVYFGTFKLRFGNTFITGFDMFVEYATKGLPFSYKGKLIYTPINAMKQVLSRSYISTMAMHTSPGQMFLSLPAILGPFFIVLMRESYEGMKVAMKELMTELKQVANAKKAKKKKGRKAGMTKELEDELYVYFDTIQTTFLLGLLVEVIQNNDRLGTISLLSLMPVCVVCLASTLFGPSSSKRFRMLNLAFTAAMVLFYGFFNQSGIPRVMLKVGAGGIESIPQNADLIMFKGVIGHRSLLGPNMKNVSIHDAGDSRLKLMTTLRDLKSQDGYREELLFVCAPATVDMKDEEFELVDTLAYGHMAVQQLPNNIDDAFKKSSLLMYKFIGDEDEAIIR 641
            +LWGK G+QPLRYVR A+EG AIFAFW +IW++VDSV+FGTFKLRFG T +T FDMF++Y TKGLPFSYKG L+YTPINA  +V +R +IS++AM+TSPGQMFLSLPAILGP FIVLMRESYEG+KVAMKELM+E+KQVANAKK KK+K +KAGMTKELE+E+Y YFDTIQTTFL+GLL+EVIQNNDRLG ISL+SL+P CVVC+A T+FGP SS+ FR  +L FT AMV FYGF +QSGIPRV+L+ GAG +  IPQNADL+M+KG+IGHRS LGPN KN+S++D GDSRLKLMTTLR+LK+QDGY+E+ L VCAPAT  MK EEFE+V  LA GHM++ +LPNNIDDA KKS+L+ YKF+GDEDEAIIR
Sbjct:    2 SLWGKPGIQPLRYVRAALEGAAIFAFWASIWVSVDSVFFGTFKLRFGGTVMTSFDMFLDYCTKGLPFSYKGSLVYTPINAFHEVANRKFISSLAMNTSPGQMFLSLPAILGPLFIVLMRESYEGLKVAMKELMSEMKQVANAKKTKKRKPKKAGMTKELEEEIYTYFDTIQTTFLMGLLIEVIQNNDRLGVISLMSLIPPCVVCIAGTIFGPDSSRNFRYAHLVFTVAMVFFYGFMHQSGIPRVLLRGGAGSLSLIPQNADLVMYKGIIGHRSFLGPNFKNISVYDGGDSRLKLMTTLRELKNQDGYQEDRLLVCAPATTQMKTEEFEVVGMLAGGHMSIAELPNNIDDAVKKSALMAYKFVGDEDEAIIR 372          
BLAST of Gcaud9188.t1 vs. uniprot
Match: A0A1X6NVW9_PORUM (Mannosyltransferase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVW9_PORUM)

HSP 1 Score: 412 bits (1058), Expect = 7.520e-132
Identity = 243/602 (40.37%), Postives = 346/602 (57.48%), Query Frame = 0
Query:   56 RTFLSSPLYFLFVAIRFALIFTPAILEGIEFDEGVDSLAVTLLPHMNSAGLDPAVLAPASGMTAQSNCTRSIVGAFVSSGIPYMGANIVCNQLLDGCKPQWMGFIAMIAPRVWMFLLSFITDLFLLRIFAVYEGENALSALLTYSSLWTTLLAMTRNSNFALETMCLTIIVAACFGWPINTARPLFWLSAFALSLGIFLRPAFAFFAITPVLFLSNLWGKNGLQPLRYVRGAMEGIAIFAFWCTIWITVDSVYFGTFKLRFGNTFITGFDMFVEYATKGLPFSYKGKLIYTPINAMKQVLSRSYISTMAMHTSPGQMFLSLPAILGPFFIVLMRESYEGMKVAMKELMTELKQVANAKKAKKKK---------GRKAGM-------TKELEDELYVYFDTIQTTFLLGLLVEVIQNNDRLGTISLLSLMPVCVVCLASTLFGPSSSKRFRMLNLAFTAAMVLFYGFFNQSGIPRVMLKVGAGGIESIPQNADLIMFKGVIGHRSLLGPNMKNVSIHDAGDSRLKLMTTLRDLKSQDGYREELLFVCAPATVDMKDEEFELVDTLAYG-HMAVQQLPNNIDDAFKKSSLLMYKFIGDEDEAII 640
            R  L+S LY L V +RFA I  P  ++  E  +G D LA  LLP M  A    A  A  +GM A     RS+VGA +++GIPYM  N++   +     P  +G + ++APR+WM LLS + D+  L +F   E   A+  ++T +S WTT   MTRNSNF LE +C+  ++AACF   +N  RPLF+L+A A+SLGIFLRP F  +  T V+FL   + +     LRY+RGA+EG AIF   CT+++TVDSV+ G FKL  G   +T FD FV     G P  YKG+L+ TP+ A+ +        T   + SPGQ+F+SLP ILGP F +L R+SYEG +  +K L  ELK   NA  +             G+K           K  E+E  V++DTIQTT LLGLL +V+Q+NDR+G +SLL L+   VVC    +F   S    R   LA TA  V+     N   + R+ L + AG    +P +A++++++G++      G N   V+ HD G +R +LM+ L+ L++ D + E+ L V AP TV MK  + E V  L  G HM++   P N+DDA +++ L  Y+F+GDED+++I
Sbjct:   52 RDLLTSKLYLLLVVLRFAAILLPGYVDNAELLDGQDVLAAALLPGMPPA----AASALPAGMAADPP-VRSMVGAVITTGIPYMAVNLLSRAV--PLPPSLLGVVGVVAPRLWMCLLSLLMDVLTLNLFNYNEQHAAIPTVMTLASTWTTFALMTRNSNFTLEALCVAGVIAACFVGELNHERPLFYLTALAMSLGIFLRPMFIGYFTTMVIFLLAAYARPEFSTLRYIRGAVEGTAIFGIMCTLYVTVDSVFHGLFKLTIGGVPVTNFDSFVGLVGSG-PLGYKGRLVITPLQAILKYWRGWTFKTFQQNASPGQIFISLPFILGPLFFLLARDSYEGTRKELKGLAAELKAAGNASGSSSNTTGPSVRGPDGKKXXXXXXXXXXAKVREEETLVFYDTIQTTLLLGLLFDVVQHNDRIGLVSLLPLVMPAVVCAHEHIFAADSRYWMRYAWLATTAVAVISLAGANHGALTRMALSLSAGDRGQLPADANVVVYRGLVPPAVAFGANPHGVTFHDGGLTRTELMSKLKKLRADDTHEEDKLLVVAPGTVRMK-RDLEAVPELTRGFHMSLHDPPTNVDDALRRTQLRFYRFVGDEDDSLI 644          
The following BLAST results are available for this feature:
BLAST of Gcaud9188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IKV0_9FLOR0.000e+081.45Mannosyltransferase n=1 Tax=Gracilariopsis chorda ... [more]
R7QTC3_CHOCR2.030e-19773.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NVW9_PORUM7.520e-13240.37Mannosyltransferase n=1 Tax=Porphyra umbilicalis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..419
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 645..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR22760:SF3GPI MANNOSYLTRANSFERASE 4coord: 121..566
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 482..487
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 310..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 433..453
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 507..666
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 454..458
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 488..506
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 459..481
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 393..432
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..309
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 372..392
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 270..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..166
NoneNo IPR availableTMHMMTMhelixcoord: 433..455
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 215..237
NoneNo IPR availableTMHMMTMhelixcoord: 287..309
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 370..387
NoneNo IPR availableTMHMMTMhelixcoord: 488..507
NoneNo IPR availableTMHMMTMhelixcoord: 459..481
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
IPR005599GPI mannosyltransferasePANTHERPTHR22760GLYCOSYLTRANSFERASEcoord: 121..566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1948_length_7509_cov_4.738204contigNODE_1948_length_7509_cov_4.738204:1493..3493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9188.t1Gcaud9188.t1Gracilaria caudata M_176_S67 malemRNANODE_1948_length_7509_cov_4.738204 1493..3493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9188.t1 ID=Gcaud9188.t1|Name=Gcaud9188.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=667bp
MSSKPVESDPLIASSKSKHTASAPSKKLKRVRKVRDRTTTDDPTAASLGL
GAPVLRTFLSSPLYFLFVAIRFALIFTPAILEGIEFDEGVDSLAVTLLPH
MNSAGLDPAVLAPASGMTAQSNCTRSIVGAFVSSGIPYMGANIVCNQLLD
GCKPQWMGFIAMIAPRVWMFLLSFITDLFLLRIFAVYEGENALSALLTYS
SLWTTLLAMTRNSNFALETMCLTIIVAACFGWPINTARPLFWLSAFALSL
GIFLRPAFAFFAITPVLFLSNLWGKNGLQPLRYVRGAMEGIAIFAFWCTI
WITVDSVYFGTFKLRFGNTFITGFDMFVEYATKGLPFSYKGKLIYTPINA
MKQVLSRSYISTMAMHTSPGQMFLSLPAILGPFFIVLMRESYEGMKVAMK
ELMTELKQVANAKKAKKKKGRKAGMTKELEDELYVYFDTIQTTFLLGLLV
EVIQNNDRLGTISLLSLMPVCVVCLASTLFGPSSSKRFRMLNLAFTAAMV
LFYGFFNQSGIPRVMLKVGAGGIESIPQNADLIMFKGVIGHRSLLGPNMK
NVSIHDAGDSRLKLMTTLRDLKSQDGYREELLFVCAPATVDMKDEEFELV
DTLAYGHMAVQQLPNNIDDAFKKSSLLMYKFIGDEDEAIIRDDEEAAEQE
EREREERNGGGSNEEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005599GPI_mannosylTrfase