Gcaud9179.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9179.t1
Unique NameGcaud9179.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length168
Homology
BLAST of Gcaud9179.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 3.980e-43
Identity = 78/166 (46.99%), Postives = 113/166 (68.07%), Query Frame = 0
Query:    1 MNASSLEHLYRGCDSLLYISSTAPMKERVWSVMKYRQLGKHGNGSLSDAQMNQAASDLEKDDKQVKLLNSYPFWKDMDTALDIQGIERPKPDYVIRKSKLTRELSDLLQTLQCDTDVKSDNIHSADDRGLSNDFEIDDNDELHRRMVRRAERHNQKGLKKALKFSK 166
            MN++SL  L  GCD+L YI+STAPMKER+WS++KYRQ+ KHGN SL++ Q+  A  DL K+  Q+++LN+YP+ +  +T ++   I+   PDYVIRKS+L  ++S LL+   C+T   S+NIH  +     +   IDD+D LH RM+R A + N  GLKKA  F++
Sbjct:  120 MNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQIEVLNAYPYLQTHETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLLEHASGLDKITIDDDDGLHERMLRLARQRNDVGLKKAADFAR 285          
BLAST of Gcaud9179.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 103 bits (257), Expect = 6.920e-24
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 0
Query:    1 MNASSLEHLYRGCDSLLYISSTAPMKERVWSVMKYRQLGKHGNGSLSDAQMNQAASDLEKDDKQVKLLNSYPFWKDMDTALDIQGIERPKPDYVIRKSKLTRELSDLLQTLQCDTDVKSDNIHSA--DDRGLSNDFEIDDNDELHRRMVRRAERHNQKGLKKALKF 164
            +N+ ++  L + C +L YI+S AP++ER+ S  KY   G HGN +L D QM+ AA       +Q + LN YP+  D    +++       P+YVIRK  L ++L+ LLQTLQCDT   S N+H A  D+  +       D D L++ + RRA  HN  GL++  +F
Sbjct:  110 LNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRFLNHYPYVDDDKKPINVST--PLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAGD-DTLYQTLARRALSHNALGLQQLKQF 272          
The following BLAST results are available for this feature:
BLAST of Gcaud9179.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4P6_9FLOR3.980e-4346.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1M7_9FLOR6.920e-2437.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3651_length_3124_cov_5.715134contigNODE_3651_length_3124_cov_5.715134:2557..3060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9179.t1Gcaud9179.t1Gracilaria caudata M_176_S67 malemRNANODE_3651_length_3124_cov_5.715134 2557..3060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9179.t1 ID=Gcaud9179.t1|Name=Gcaud9179.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=168bp
MNASSLEHLYRGCDSLLYISSTAPMKERVWSVMKYRQLGKHGNGSLSDAQ
MNQAASDLEKDDKQVKLLNSYPFWKDMDTALDIQGIERPKPDYVIRKSKL
TRELSDLLQTLQCDTDVKSDNIHSADDRGLSNDFEIDDNDELHRRMVRRA
ERHNQKGLKKALKFSKR*
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