Gcaud9146.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9146.t1
Unique Name	Gcaud9146.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	619

Homology

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BLAST of Gcaud9146.t1 vs. uniprot
Match: A0A2V3INM6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM6_9FLOR)

HSP 1 Score: 436 bits (1120), Expect = 3.600e-142
Identity = 258/580 (44.48%), Postives = 336/580 (57.93%), Query Frame = 0

Query:   41 GRPQSGCV--LLTDDDSSSDWDSSAPL-SVLPRSRGRKRPIRSSSLAARRALRDEEP-SIDDWVRNLVELRRWRQLPRTTTLTSATQEWLSEQHHALENATLPFLLKCILTVCNASPTFHHFRKDFMRPEYRNRYWSWCLKFVELVDYYLDYGHVKVHLRGGQRYKPLMIFIQNAQEQREEATLQPLQEQVLSAIGVQWERA--EHGFQHRE--DIPSELEHGNPLGYEPNDNQWYLDSAAHPNPLKTKFDSISQDKTKRRKFGSAPPTVPPTKTKPHSSVFDSGYSAGMAGSENGPARILDWARHIVELRPYFREGKGYEIPPNRTNLAIWMHSETARSMTGALPAICCCILKVTKVTNAVDDTVYISEECESWCKCYVEYLDFALETYKTGHATHEPTSTVTGFMLACRKNSIEGVLSEERSALLRAVDAHWRESELMGISIRRSRAKPNRVNMVRNNSFGSVEEVE---LDSGAPRDARRGEPRELXXXXXXXXXXXXHKLRASQRRREPSKKRKPVHRHTAKKCKAMVSAMITGVVGETVEGRKRTTAEKRAAEWVSESGTEALNKYAQMWFTDAT 609
            GRP    V  L +D+ SS+DW+    + S LP SR R+R +RS+  +   +  +E   + +DW R+LVELR+ R     T L SAT++WL+EQH ALE+A+LP L KC+L V +AS  F H R DF + EYR RYWSWC  F+ L+DY + +G   +     Q    L  F+ NA  Q+E  TL   +EQ+L A+G+         G +H+    I ++                                      +   +    P      ++KPHSS FDSGYS G+  SENG   +LDWARHIVELR YF EGKGYEIPP+R  L+IWM++E ARS+ G LPAICCCIL+VT+VT++VDDTVYISEECE WCK YVEYLDFALE  + GH  H+ +S+VT FM  CR+N IE  LSEERSALLRAVD  W ES+L+ +SI+R++AK       +  +   +E VE   LDS    D ++ + R               KL    +R+ P            K+C+AM+S MI G VGET+EGRKRT  EK+A EWVS +G  ALN YAQ WF D T
Sbjct:   69 GRPSGKQVWPLSSDEASSADWNEVTQIESPLP-SRNRRRSLRSARRSVPPSHGEETTQTTEDWTRSLVELRKHRIRSNPTLLNSATRKWLNEQHQALESASLPVLKKCMLAVASASYVFRHCRDDFRKSEYRGRYWSWCETFLRLIDYSISHGTDSLTQMDAQVPASLKSFVLNAHTQKENGTLSSQKEQMLIAVGIPLREGVLSEGKRHKSLLSISTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAQSSFRPVRTRGRQSKPHSSAFDSGYS-GVVDSENGRPSLLDWARHIVELRAYFEEGKGYEIPPDRPYLSIWMNAEMARSVAGTLPAICCCILRVTEVTDSVDDTVYISEECEKWCKSYVEYLDFALENGEFGHDIHKASSSVTDFMYDCRQNLIEYTLSEERSALLRAVDHKWLESKLLDLSIKRNQAKLGAAQRKQRETEDPIERVEETVLDSWTRYDTKQVDQR---------------KLETQSKRKRPK---------IGKECQAMLSEMIKGFVGETIEGRKRTATEKKAEEWVSRTGANALNTYAQKWFRDLT 622

The following BLAST results are available for this feature:

BLAST of Gcaud9146.t1 vs. uniprot

BLAST of Gcaud9146.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3INM6_9FLOR	3.600e-142	44.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_196_length_38551_cov_4.508138	contig	NODE_196_length_38551_cov_4.508138:15408..17264 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9146.t1	Gcaud9146.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_196_length_38551_cov_4.508138 15408..17264 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9146.t1 ID=Gcaud9146.t1|Name=Gcaud9146.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=619bp
MANRRTNEQHQRSRLRRQSSHRSKQLPNERSRQWHTIDEHGRPQSGCVLL
TDDDSSSDWDSSAPLSVLPRSRGRKRPIRSSSLAARRALRDEEPSIDDWV
RNLVELRRWRQLPRTTTLTSATQEWLSEQHHALENATLPFLLKCILTVCN
ASPTFHHFRKDFMRPEYRNRYWSWCLKFVELVDYYLDYGHVKVHLRGGQR
YKPLMIFIQNAQEQREEATLQPLQEQVLSAIGVQWERAEHGFQHREDIPS
ELEHGNPLGYEPNDNQWYLDSAAHPNPLKTKFDSISQDKTKRRKFGSAPP
TVPPTKTKPHSSVFDSGYSAGMAGSENGPARILDWARHIVELRPYFREGK
GYEIPPNRTNLAIWMHSETARSMTGALPAICCCILKVTKVTNAVDDTVYI
SEECESWCKCYVEYLDFALETYKTGHATHEPTSTVTGFMLACRKNSIEGV
LSEERSALLRAVDAHWRESELMGISIRRSRAKPNRVNMVRNNSFGSVEEV
ELDSGAPRDARRGEPRELRELREPREPRKPHKLRASQRRREPSKKRKPVH
RHTAKKCKAMVSAMITGVVGETVEGRKRTTAEKRAAEWVSESGTEALNKY
AQMWFTDATMKNEKDRKQ*