Gcaud9139.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9139.t1
Unique NameGcaud9139.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length258
Homology
[Close]
BLAST of Gcaud9139.t1 vs. uniprot
Match: A0A2V3IJ97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ97_9FLOR)

HSP 1 Score: 243 bits (619), Expect = 4.340e-77
Identity = 152/263 (57.79%), Postives = 197/263 (74.90%), Query Frame = 0 
Query:    1 MFRSQYVGQVEILEDDQPAQDIDTSASPSTHPKSAAKALLLHEAREGLQDTKTILNTAVQSHEVAEATASSLSAQTRQLEGIAEDLATVEGTVDKAGNTVHQLTRNPLRALVEKPLTRRKRRQKHV----ESTLLSTKEYSKDTRSKSDEYENGSR-SSWLARRREELIPGSASKENRNEKRIVEVLEDDYSEF-DDDVKQILRKQDECLDQTAYQLTELQNLALGINSELDKQAEIVDSIDAPKITGKLRFNNAKLKRKFKL 257
            +FR++  G+VE L DD+P+ D  TS  P    ++A +ALLLHEA +GL+ TK I +TA QSHEVA ATASSLSAQTRQLEGIA+ L  V+ TVDKAG TVH+LTRNPLRALVEKP +R KRR+K V    +S L S+ + S+   S  D+ E  ++ S+WL+RR+EEL+ G+++K+     + V    D YS+  DD+VKQILRKQD+ LD+TA QL+ELQ +ALG+N E++KQAEIVDSIDAP+IT K+R+NN KLKRK KL
Sbjct:    3 LFRTRLPGEVEFL-DDEPSNDNSTSP-PQDVQENAPRALLLHEAEKGLEATKNIRDTAAQSHEVAVATASSLSAQTRQLEGIADQLDEVDNTVDKAGQTVHKLTRNPLRALVEKPFSRSKRREKAVKLSGQSVLPSSSKRSQS--STGDQKEKANKPSTWLSRRKEELL-GNSTKQGDGHLQTV----DSYSDIKDDEVKQILRKQDDYLDETAQQLSELQRVALGMNEEIEKQAEIVDSIDAPEITTKIRYNNQKLKRKLKL 256
The following BLAST results are available for this feature:
BLAST of Gcaud9139.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJ97_9FLOR4.340e-7757.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableGENE3D1.20.5.110coord: 192..253
e-value: 1.1E-7
score: 34.0
NoneNo IPR availableGENE3D1.20.5.110coord: 38..104
e-value: 8.2E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..148
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 197..253
e-value: 1.40531E-7
score: 45.242
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 190..252
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 45..104
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 194..236
score: 11.615061

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_415_length_26227_cov_4.944291contigNODE_415_length_26227_cov_4.944291:20021..20794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9139.t1Gcaud9139.t1Gracilaria caudata M_176_S67 malemRNANODE_415_length_26227_cov_4.944291 20021..20794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9139.t1 ID=Gcaud9139.t1|Name=Gcaud9139.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=258bp
MFRSQYVGQVEILEDDQPAQDIDTSASPSTHPKSAAKALLLHEAREGLQD
TKTILNTAVQSHEVAEATASSLSAQTRQLEGIAEDLATVEGTVDKAGNTV
HQLTRNPLRALVEKPLTRRKRRQKHVESTLLSTKEYSKDTRSKSDEYENG
SRSSWLARRREELIPGSASKENRNEKRIVEVLEDDYSEFDDDVKQILRKQ
DECLDQTAYQLTELQNLALGINSELDKQAEIVDSIDAPKITGKLRFNNAK
LKRKFKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom