Gcaud9118.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9118.t1
Unique NameGcaud9118.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length487
Homology
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3IQ92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ92_9FLOR)

HSP 1 Score: 489 bits (1259), Expect = 8.410e-166
Identity = 251/485 (51.75%), Postives = 330/485 (68.04%), Query Frame = 0
Query:   21 ANQSPASGAFNCSLYDRQQWQDNGKGCLANMENNPGLYEKCRDSSDSI-CYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRSSRGPLDQLIRPFEKGAWATFIGLVLFAFCMSLVMAIRFHWSAKRSIVSACFIFAGNWEVVRPEEGDPEDSASTTSISSDMQNNIAKKYALASLLFRVSLIALVAVFALFYE--------------------------LKNFVVLKNSALENVWDETVSAGKQD-WPQGIHWKQCPTATECIEDVQDCAADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGGWLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNISTMTVLIPCLIFVVPPLVLSLLVLMFW 477
            A+  PASG F+C+ ++ +  Q+NGKGCL N+  N  LYE+CR    ++ CYIFLQEPPFINL +V+ +N+S  A QLQKPF+CG F++    VGG+ GIAFETHKLTSSR+D CMWGGH+D C FNQLVDY  + ADE YRFAVTGLLLE P RQC HHPSA L D+ ++I+G+ D      +GP +QLIRPF+ GAW  F G+++    +   +A+RFHW   RS+++A FIFAG  +     E      A+    ++D     A KY LA  LFR++L+AL+A+FALFYE                          LK+F VL+ SALENVW+ TV AG++D W   + W++CPTATEC++  ++    +MVTFEIVGKHLL+  + C +LTV +T+DVLY FNGGWLYN AV+E RR+QVDRELVGLRIDG++R+L +  L+EY CE +   + I    +LIPCLIFV+PPL  S+LVL+ W
Sbjct:   23 AHCKPASGNFDCTQHNPRASQNNGKGCLRNLNINRHLYEQCRSKDSNVTCYIFLQEPPFINLDRVQLWNSSDAATQLQKPFECGDFEDQFLHVGGIGGIAFETHKLTSSRNDLCMWGGHSDDCGFNQLVDYTHLMADEGYRFAVTGLLLELPSRQCFHHPSAALTDSAVIIVGQKDASNGVVQGPFEQLIRPFDWGAWGIFGGVLILFIIVCFTIAVRFHWFRGRSLITAFFIFAGERDEAMAHE------ANVNHHNNDDAMAFATKYGLAMTLFRMALLALIAIFALFYEVAVVNFLFQQQNQSLSKPVKRLPLADLKHFSVLRGSALENVWNATVLAGRKDNWGNDLPWQRCPTATECVDWTKEGKTTYMVTFEIVGKHLLAQKTECSELTVFKTKDVLYHFNGGWLYNKAVSEERRMQVDRELVGLRIDGQSRKLVDSYLDEYTCEEN-IVLTIGPTIILIPCLIFVLPPLACSVLVLVLW 500          
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3IE21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE21_9FLOR)

HSP 1 Score: 264 bits (674), Expect = 1.550e-78
Identity = 182/534 (34.08%), Postives = 273/534 (51.12%), Query Frame = 0
Query:   15 AFVEVSANQSPASGAFNCSLYDRQQ---WQDNGKGCLANMENN--PGLYEKCRDSSDSICYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRSSRGPLDQLIRPFEKGAWATFIGLVLFAFCMSLV---MAIRFHWSAKRSIVSACFIFAGNWEVV-------RP----------EEGDPEDSASTTSISSDMQNNIAK--------------KYALASLLFRVSLIALVAVFALFYELK--NFV------------------------VLKNSALENVWDETVSA------GKQDWPQGIHWKQCPTATECIEDVQD--CAADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGGWLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNISTMTVLIPCLIFVVPPLVLSLLVLM 475
            AF+    +    S  ++C+ Y+          G  C++ + +      YE C++S+   C+IF  EPP +  + +E F   +   ++Q+PFKCG  K     +GG   I FE HK TSSRDD+C W GH   CT+N LVD++ + A   YRF V+G +LETPQR+C H  S P +D+ M+IIG++ P+   S  PL QL +PFE  +W T   LVLF F   L+   +  R       S+V+A FIF G+ E         +P          E GD   S  T+  +S +  +++               +Y+LA  L RVS +  VA+F +FYEL   NFV                        ++KNSALEN+W+ TV+       G  D    I WK+C  A +CI+   +      F V++E+  ++ L   +SC++L   +TR  L+ FN GWLYN AV E  R + DRE+V LRIDG    +    ++ + CE    ++ + ++ ++IP LIFV+PPL L+  V++
Sbjct:   18 AFLSCRCHCDMVSAEYDCNDYNATLNLISLPRGAECVSALTDKRYAAAYEVCKNST---CFIFKGEPPLVK-YDLETFYKPENRKKMQRPFKCGDPKSLHPSLGG---IVFELHKKTSSRDDFCTWAGHPSECTWNALVDFVHVMAGRGYRFVVSGPMLETPQRKCYHQASGPWLDSRMVIIGRNSPEDVVSTNPLKQLTQPFETLSWVT---LVLFLFVYLLLGIGIVNRIRRRRNVSLVTALFIFTGDLEHAIKHETCPQPPRAERENDSIESGDGSTSDGTSRTASTVHVSVSNGHLGEQRRRRISFLRYSLAINLIRVSFLFFVALFVMFYELSLVNFVFQQQNLHIKKDVDSLSPNELNKFSIMKNSALENIWNRTVNPHGLKYDGTNDTQ--IPWKRCRNALQCIDWTLNGKYGVKFTVSYELQAQNALQTIASCEELVFFETRRNLHTFNSGWLYNSAVPENIRKRYDREIVALRIDGTLTRIYNSYVD-FTCEER-RTLKVKSLIIVIPILIFVLPPLFLAAYVML 537          
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3J4B8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4B8_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 1.930e-69
Identity = 159/525 (30.29%), Postives = 269/525 (51.24%), Query Frame = 0
Query:   32 CSLYDRQ-QWQDNGK--GCLANMENNPGLYEKCRDSSDSICYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRSSRGPLDQLIRPFEKGAWATFIGLVLFAF-CMSLVMAIRFHWSAKRSIVSACFIFAGN------------------------------------WEVVRPEEGDPEDSASTTSISSDMQNNIAK--------------KYALASLLFRVSLIALVAVFALFYE--------------------------LKNFVVLKNSALENVWDETVSAGKQDWP----QGIHWKQCPTATECIEDV--QDCAADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGGWLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNISTMTVLIPCLIFVVPPLVLS 470
            C  Y+ + + ++ GK   CL+ + ++P   EK       IC+I++  P F+   + ++F +++   ++Q PF+C  ++   + +    GIA E  + TS+RDD+C+W G +D CT+N +VDY  + A   Y+FA+ G LLE P R+C+H  S   +DN M+IIGK +   RS   P  QL  PF  GAW   +G+ +  F  M L++  RFH    +S+V+A FIF G+                                     E  +    D  + + +  + + + + +                K++LA+ LFR+SLIA +A+F+LFYE                          L+ + VLK++ LEN+W+ TV+   + +     + I WK+C  A EC++ V   D    F V++E+ G++L+ + ++C+ + +++TR+ L+QFN GWL+N  V E RR ++DREL+ LR++GR  +L        +C+    S +I  + +L+P ++ VVPPL  S
Sbjct:   41 CDSYNPEARLREAGKLGNCLSAL-SDPQFREKFEVCKKRICFIYMYNPTFVRFDQ-KHFESAENEKRMQLPFRCKSWQNWHRSL---DGIAIELIEETSARDDYCVWAGPSDSCTWNAMVDYTAVAARRGYQFAIVGPLLEFPHRKCEHFASGSWLDNTMVIIGKPENMARS---PFGQLTEPFTNGAWIV-VGVTVGMFIAMCLLIVWRFHVLQGKSLVTAYFIFMGDRAAALAAGKQIDENDLRRAGSMLSRKCTQDAMRSNDLEAAKSTRSDDSEESESAQMDNKLDHVVGNSIDEESCIDDSFLTKFSLATSLFRISLIAFIAMFSLFYEVAVVNFLFQQQRIEIPKSIGQLSTLELRQYCVLKDTGLENIWNNTVNPTGRKFDGSDEKEIPWKRCVHAQECLDWVLDDDNPVQFFVSYEMEGRYLMHSRTNCEAVAIYETRETLHQFNSGWLFNERVPEKRRRELDRELMALRLNGRLTQLHNGV--GPRCQPDVIS-SIDYLILLLPVMVLVVPPLFFS 553          
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3J310_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J310_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 4.990e-68
Identity = 159/514 (30.93%), Postives = 261/514 (50.78%), Query Frame = 0
Query:   47 CLANMENNPGLYEKCRDSSDSICYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRSSRGPLDQLIRPFEKGAWATFIGLVLFAF-CMSLVMAIRFHWSAKRSIVSACFIFAGN------------------------------------WEVVRPEEGDPEDSASTTSISSDMQNNIAK--------------KYALASLLFRVSLIALVAVFALFYE--------------------------LKNFVVLKNSALENVWDETVSAG--KQDWP--QGIHWKQCPTATECIEDV--QDCAADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGGWLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNISTMTVLIPCLIFVVPPLVLSLLVLMFW 477
            CL+ + ++P   EK       IC+I++ +P F+   + ++F +++   ++Q PF+C  ++   + +    GIA E  + TS+RDD+C+W G +D CT+N +VDY  + A   Y+FA+ G LLE P R+C+H  S   +DN M+IIGK +   RS   P  QL  PF  GAW   +G+ +  F  M L++  RFH    +S+V+A FIF G+                                     E  +    D  + + +  + + + + +                K++LA+ LFR+SLIA +A+F+LFYE                          L+ + VLK++ LEN+W+ TV+    K D    + I WK+C  A EC++ V   D    F V++E+ G++L+ + ++C+ + +++TR+ L+QFN GWL+N  V   RR ++ RELV L+++GR  +L        K E + SS+N   +  L+P L  VVP +  S +V M W
Sbjct:   58 CLSAL-SDPQFREKFEVCKKRICFIYMYDPTFVRFDQ-KHFESAENEKRMQLPFRCKSWQNWHRSL---DGIAIELIEETSARDDYCVWAGPSDSCTWNAMVDYTAVAARRGYQFAIVGPLLEFPHRKCEHFASGSWLDNTMVIIGKPENMARS---PFGQLTEPFTNGAWIV-VGVTVGMFIAMCLLIVWRFHVLQGKSLVTAYFIFMGDRAAALAAGKQIDENDLRRAGSMLSRKCTQDAMRSNDLEAAKSTRSDDSEESESAQMDNKLDHVVGNSIDEESCIDDSFLTKFSLATSLFRISLIAFIAMFSLFYEVAVVNFLFQQQRIEIPKSIGQLSTLELRQYCVLKDTGLENIWNNTVNPNGIKFDGSDEKEIPWKRCVHAQECLDWVLDDDNPVQFFVSYEMEGRYLMHSRTNCEAVAIYETRETLHQFNSGWLFNERVPRKRRRELGRELVTLKVNGRLTQLLNSLGPRCKPEVT-SSINFPVL--LVPILFLVVPSMTCSAVVAMCW 559          
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3IT12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT12_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 4.650e-53
Identity = 144/437 (32.95%), Postives = 223/437 (51.03%), Query Frame = 0
Query:   46 GCLANMENN---PGLYEKCRDSSDSICYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRSSRGPLDQLIRPFEKGAWATFIGLVLFAFCMSLVMAIRFHWSAKRSIVSACFIFAGNWEVVRPEEGDPEDSASTTSISSDMQNNI-AKKY-----ALASLLFRVSLIALVAVFA--LFYELKNFVVLKNSALENVWDETVSAGKQDWPQG----IHWKQCPTATECIEDVQDCA--ADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGGWLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNISTMTVLIPCLIFVVP 465
            GCL  +  N   P  Y  C++ +   CY+FLQEPPFI + + +  +       L KPF C + +E      G+ GIAFE H LTSS    C++ G    C+FNQL D+    A   +RFAV+G  ++TP+R+C   PSAPLVD+ MMI+G +      +   L+Q+ RPF  G W   +G+ L      +++ I       + +  A ++  G  E  R ++ + +  AS+ S+     ++  A  Y     A+ + LF  S + +    A     +L ++ VLK+SALE VWD +V   ++ +         WK+C +  ECIE V        F VT+ ++G H +   + C  LT  +++  L  FN GWL+N A+    +L+++R++VGLRI G   E       +  CE    S  I ++ VLIP  IFV+P
Sbjct:   35 GCLPPLARNIHHPD-YAHCKNQT---CYLFLQEPPFIVVPQFKTRDP------LYKPFPCSEPQELHP---GLEGIAFEVHALTSSARSSCIFAGQKSQCSFNQLHDFAVWYAQYGFRFAVSGAWIDTPERRCHLTPSAPLVDSSMMIVGANIAS--PATNALEQVTRPFRTGTWVVLLGVTL----SFVLVGIAIAGIVAKKLSKAVYVLTGLKE--RLQDVNSKRLASSLSMLRAAVSSFGAIVYLFYGAAVVNFLFAQSNVHMTKSVAGLRVSDLSHYAVLKDSALEYVWDASVDPMRRKYDSNESTNYPWKRCSSGKECIEWVYKGTNNVQFAVTYGVLGNHFIHELADCHILTEWRSKQPLATFNIGWLFNRAIPMDEQLEINRQIVGLRIRGTIGEFVSRRKGDATCEEVAVS-TIGSLVVLIPIGIFVLP 449          
BLAST of Gcaud9118.t1 vs. uniprot
Match: A0A2V3ITB5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITB5_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 6.650e-25
Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 0
Query:   48 LANMENNPGLYEKCRDSSDSI-CYIFLQEPPFINLHKVENFNASKEAFQLQKPFKCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDYIDIKADEKYRF 161
            L N+E NP LY+ CR    +I C  FLQ+PP I   ++   N S EAF LQK  KCG   +   E G    +A E  +LT+S DDWCMW GH+D  TFNQLVDY  I A++   F
Sbjct:   19 LRNLELNPDLYDSCRPHDSNITCNNFLQQPPLIAFKRMYMRNNSDEAFVLQKLLKCGPLSDQFLEFGSGRELASEIDELTASDDDWCMWYGHSDCWTFNQLVDYTQIMAEKNIAF 133          
The following BLAST results are available for this feature:
BLAST of Gcaud9118.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IQ92_9FLOR8.410e-16651.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE21_9FLOR1.550e-7834.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4B8_9FLOR1.930e-6930.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J310_9FLOR4.990e-6830.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT12_9FLOR4.650e-5332.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITB5_9FLOR6.650e-2547.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 311..454
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 455..477
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..310
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 478..486
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..287
NoneNo IPR availableTMHMMTMhelixcoord: 454..476
NoneNo IPR availableTMHMMTMhelixcoord: 288..310
NoneNo IPR availableTMHMMTMhelixcoord: 216..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_156_length_42793_cov_4.230575contigNODE_156_length_42793_cov_4.230575:38859..40505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9118.t1Gcaud9118.t1Gracilaria caudata M_176_S67 malemRNANODE_156_length_42793_cov_4.230575 38859..40505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9118.t1 ID=Gcaud9118.t1|Name=Gcaud9118.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=487bp
MIPTVLFFLTALVWAFVEVSANQSPASGAFNCSLYDRQQWQDNGKGCLAN
MENNPGLYEKCRDSSDSICYIFLQEPPFINLHKVENFNASKEAFQLQKPF
KCGQFKESLKEVGGVSGIAFETHKLTSSRDDWCMWGGHADHCTFNQLVDY
IDIKADEKYRFAVTGLLLETPQRQCKHHPSAPLVDNEMMIIGKSDPQFRS
SRGPLDQLIRPFEKGAWATFIGLVLFAFCMSLVMAIRFHWSAKRSIVSAC
FIFAGNWEVVRPEEGDPEDSASTTSISSDMQNNIAKKYALASLLFRVSLI
ALVAVFALFYELKNFVVLKNSALENVWDETVSAGKQDWPQGIHWKQCPTA
TECIEDVQDCAADFMVTFEIVGKHLLSAHSSCDQLTVHQTRDVLYQFNGG
WLYNMAVNETRRLQVDRELVGLRIDGRARELQEDALEEYKCESSGSSMNI
STMTVLIPCLIFVVPPLVLSLLVLMFWDYCISHRKK*
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