Gcaud9117.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9117.t1
Unique NameGcaud9117.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length246
Homology
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BLAST of Gcaud9117.t1 vs. uniprot
Match: A0A2V3J0Y9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Y9_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 3.830e-50
Identity = 86/147 (58.50%), Postives = 104/147 (70.75%), Query Frame = 0 
Query:  100 MIDLRLGEKLFTG-TPCPACAASNAHSVPRLDPFGYHAMICPVGLGATRRHNALRDTFYTFLNQPPFCLHVVREWKFPSQQHLDETEQWRLDLLIDDIRFSNAPLGIDVTIVSPSSRNFALPSSRAAGAAATKAETLKRAKYSGLCS 245
            MIDLRLGEKLF+G TPC  CAA+N   VP LD  GYHAM+C VGLGATRRHNAL++  +  L Q P CLHV  E  FPSQQHL E +Q R+DLLIDD RF+  P+ +D+T+VSP + +F   +S+ A  AA  AE  KR KY  LC+
Sbjct:    1 MIDLRLGEKLFSGSTPCLLCAAANYAVVPPLDEHGYHAMVCTVGLGATRRHNALQNVLFAVLKQSPLCLHVTGELTFPSQQHLPEVQQQRMDLLIDDTRFNRRPVRLDITVVSPHNDSFLTYASKEAAGAARPAEAQKRTKYDALCA 147
[Close]
BLAST of Gcaud9117.t1 vs. uniprot
Match: A0A2V3IL37_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL37_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 4.510e-30
Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 0 
Query:  130 DPFGYHAMICPVGLGATRRHNALRDTFYTFLNQPPFCLHVVREWKFPSQQHLDETEQWRLDLLIDDIRFSNAPLGIDVTIVSPSSRNFALPSSRAAGAAATKA 232
            +  GYH M+C VGLGATRRHNAL D  +  L Q P CLHV REW  PSQQHL E  Q R+ LLIDD+RF    +G+D+T+VSP +  F   +S  A  AA +A
Sbjct:    6 EEHGYHVMVCTVGLGATRRHNALPDVLFAALKQSPLCLHVTREWTLPSQQHLPEVPQQRMYLLIDDVRFYERQVGLDITLVSPQNDLFLTYASMEAAGAARRA 108
The following BLAST results are available for this feature:
BLAST of Gcaud9117.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0Y9_9FLOR3.830e-5058.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL37_9FLOR4.510e-3054.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_156_length_42793_cov_4.230575contigNODE_156_length_42793_cov_4.230575:37163..37900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9117.t1Gcaud9117.t1Gracilaria caudata M_176_S67 malemRNANODE_156_length_42793_cov_4.230575 37163..37900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9117.t1 ID=Gcaud9117.t1|Name=Gcaud9117.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=246bp
MAQIANFVRDTYSLSSQFSFDSLSSRAHESGAIPKLQHLYQDAIVNQVAA
THSPTNASSLNRMALARLKSTSTVEASLCFTSFVNPASNPSIAPEIFKTM
IDLRLGEKLFTGTPCPACAASNAHSVPRLDPFGYHAMICPVGLGATRRHN
ALRDTFYTFLNQPPFCLHVVREWKFPSQQHLDETEQWRLDLLIDDIRFSN
APLGIDVTIVSPSSRNFALPSSRAAGAAATKAETLKRAKYSGLCS*
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