Gcaud9107.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9107.t1
Unique NameGcaud9107.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length595
Homology
BLAST of Gcaud9107.t1 vs. uniprot
Match: A0A2V3J1E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1E6_9FLOR)

HSP 1 Score: 561 bits (1445), Expect = 1.080e-191
Identity = 359/629 (57.07%), Postives = 414/629 (65.82%), Query Frame = 0
Query:    1 MQSPLLEFLPTARRGSADSTQSFETAVSSHTSARASMSSDPVLMARLNALNLSSVP---KRTPTKHPSVASPTSPLSSRSPSLPRRFSSCHASTSSASDNRLSMSSSN--APIHQLPPLSPLSSMYDPNSTSASGSEEDASCSSSASSDSEPTQLMHTRSMCEHGLRQNLLRGEVVNGAGVNLSPHQVPLN-QTPFRKAISQRQPASANLPAALRHRFSLDQSSNP-TASVAHE-------PFRARSESL-----------STNFDMPRGKVQHLPPSVTRPATPSRLPRPKVFIRQNSTRSSVVDAAAVKHV---PSASGSNFLEPQLVVREIPFTPSQHYAMACEQQQXXXXXXXXXEHNTLVPTTQFSAKITNVVDNQMYFTDEDEFDSQLVDPTR-----NSPSDALSSKVRRAVSALRSISFQSTQIEDFDTAWGQTLSVSQEKQNPSFASLASAKWRRARGKVVNRSNGKQFECYSENDACSLRSSGSNFS-QRDRSMNGQNHVRGFAAMRMRANFGGPHKRSLWAGARRERQ-QPHAVAAQLLVSGAGHGFLAASTDLAEQRQALATVSPSDAVEPRNSAQRGSVDKYVEFIHASAQRETKGRFGPRNFPSRVLRLFRRKWN 594
            M+SP L FLP  RR S DSTQSFETA S+H S       DPVLMARL ALNLSSVP   ++TP                  SL RR  S +AS++SASD    + ++N  A IH L           P+                         L HT+SMC+  LR +LL   + N        H  P N QTPFRKA+S RQ + A+LP ALRHRFSLD  SNP +A+VA         P R  SE L           + NFD+PRGKV+HLP +V+RPATPSRLPRPKVFIRQ+ +R SVVD  AV+H    P  S    LEPQLV RE+P +P  +   +    Q           +  V   QFSAKITNV +  MY++DEDEFDSQLVD        NSPSD LS+KVRRAVSALRSISFQSTQIEDFDTAWGQ LSVSQEK NPSFASLASAKWRRAR K  +R  GK+FECYSENDACS+RSSGSNFS Q++RS NG++ VRGFAAMRMR N  GPHKRSLWAGARR+R+ QPHAVAAQLLVSG G G LAAS +++EQRQALATV+P+DAV+ RN  Q+GSVDKYVEFIHASAQRE KG+FGPR+FP RVLRLFRRKWN
Sbjct:    1 MESPSLVFLPMHRRPSTDSTQSFETAPSTHRSVIPDSPGDPVLMARLKALNLSSVPPELRQTPLSPQKXXXXXXXXXXXXXSLNRRSVSSNASSTSASDKPHIVPNNNPSASIHDLXXXXXXXXXXXPHXXXXXXXXXXXXXXXXXXXXXXVATLTHTQSMCDDRLRNSLLHSHITNAPRSRNRFH--PQNSQTPFRKALSHRQHSPADLPPALRHRFSLDTRSNPLSAAVARSKAVDHFTPHRNHSERLVPAIRMHSTASTRNFDLPRGKVEHLP-AVSRPATPSRLPRPKVFIRQSPSRPSVVDPVAVRHFDHDPELS----LEPQLVTRELPLSPLPNLPQSTLSSQPL---------DDFVRENQFSAKITNVSEEHMYYSDEDEFDSQLVDHANSPLKDNSPSDVLSTKVRRAVSALRSISFQSTQIEDFDTAWGQALSVSQEKPNPSFASLASAKWRRARSKASSRMGGKEFECYSENDACSMRSSGSNFSSQKERSTNGRDQVRGFAAMRMR-NLSGPHKRSLWAGARRDRERQPHAVAAQLLVSGGGQGLLAASAEMSEQRQALATVAPADAVDARNGTQKGSVDKYVEFIHASAQREAKGKFGPRHFPGRVLRLFRRKWN 612          
BLAST of Gcaud9107.t1 vs. uniprot
Match: R7QG93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG93_CHOCR)

HSP 1 Score: 150 bits (378), Expect = 8.420e-37
Identity = 137/374 (36.63%), Postives = 192/374 (51.34%), Query Frame = 0
Query:  242 MPRGKVQHLPPSVTRPATPSRLPRPKVFIRQ---NSTRSSVVDAAAVKHVPSASGSNFLEPQLVVREIPFTPSQHYAMACEQQQXXXXXXXXXEHNTLVPTTQFSAKITNVVDNQMYFTDEDEFDSQLVDPTRNS----------PSDALSSKVRRAVSALRSISFQSTQIEDFDTAWGQTLS---VSQEKQNPSFASLASAKWRRARGKVVNRSNGKQFECYSENDACSLRSSGSNFSQRDRSMNGQNHVRGFAAMRMRANFGGPHKRSLW-AGARRERQQPHAVAAQLLVSGAGHGFLAASTDLAEQRQALATVSPSDAVEPRNS-AQRGSVDKYVEFIHASAQRETKGRFGPRNFPSRVLR----LFRRKW 593
            MPRG+V+ +P    RP TP +LPRP+VFI Q    ST  +  +   ++   S + S         R    TPS   + A  + +         E       TQ   +     ++  YF+D DE  + + D ++N           P DALSSKV R +S LRSISFQ+  +ED DTAWGQ  +      +K   +  S AS +WRR RG++ +++  ++FECYSE DA S+ S  S+ ++        NH     A++      G H +++W A  +R+R  P  +    LV G G  +LAA+T L    Q L TV+     EP +  ++R SVDKYVEFIHASAQRE+K +   RNF  RVL     LFRRKW
Sbjct:    1 MPRGRVECIP-RPPRPETPRQLPRPRVFISQPAGKSTNDTDFEGFMMRERYSDATS---------RSETITPSTSESSASSRPRRSSGWENAPEKTV----TQLLQE-----EDDYYFSD-DESVAGVKDLSKNLIKRADFAAVIPGDALSSKVHRVLSNLRSISFQNPAVEDPDTAWGQASAHRPALTKKSANNICSTAS-RWRRPRGRISSKNGVQEFECYSEADAASMHSYTSS-AKHPIPTRRYNHR---DALKSIQGLTGRHHKNIWNAATKRDRTSP--ITPNFLV-GTGQDYLAAATTL---NQPLHTVTAMVPAEPESQDSRRRSVDKYVEFIHASAQRESKNKLLSRNFTGRVLHRAQGLFRRKW 343          
The following BLAST results are available for this feature:
BLAST of Gcaud9107.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1E6_9FLOR1.080e-19157.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG93_CHOCR8.420e-3736.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_156_length_42793_cov_4.230575contigNODE_156_length_42793_cov_4.230575:15806..17590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9107.t1Gcaud9107.t1Gracilaria caudata M_176_S67 malemRNANODE_156_length_42793_cov_4.230575 15806..17590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9107.t1 ID=Gcaud9107.t1|Name=Gcaud9107.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=595bp
MQSPLLEFLPTARRGSADSTQSFETAVSSHTSARASMSSDPVLMARLNAL
NLSSVPKRTPTKHPSVASPTSPLSSRSPSLPRRFSSCHASTSSASDNRLS
MSSSNAPIHQLPPLSPLSSMYDPNSTSASGSEEDASCSSSASSDSEPTQL
MHTRSMCEHGLRQNLLRGEVVNGAGVNLSPHQVPLNQTPFRKAISQRQPA
SANLPAALRHRFSLDQSSNPTASVAHEPFRARSESLSTNFDMPRGKVQHL
PPSVTRPATPSRLPRPKVFIRQNSTRSSVVDAAAVKHVPSASGSNFLEPQ
LVVREIPFTPSQHYAMACEQQQQQLEQLEQLEHNTLVPTTQFSAKITNVV
DNQMYFTDEDEFDSQLVDPTRNSPSDALSSKVRRAVSALRSISFQSTQIE
DFDTAWGQTLSVSQEKQNPSFASLASAKWRRARGKVVNRSNGKQFECYSE
NDACSLRSSGSNFSQRDRSMNGQNHVRGFAAMRMRANFGGPHKRSLWAGA
RRERQQPHAVAAQLLVSGAGHGFLAASTDLAEQRQALATVSPSDAVEPRN
SAQRGSVDKYVEFIHASAQRETKGRFGPRNFPSRVLRLFRRKWN*
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