Gcaud910.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud910.t1
Unique NameGcaud910.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length282
Homology
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A2V3IVF9_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF9_9FLOR)

HSP 1 Score: 377 bits (967), Expect = 4.050e-130
Identity = 176/219 (80.37%), Postives = 199/219 (90.87%), Query Frame = 0
Query:   63 LLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFRIGVIPKQVPEYIRRPGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGTQLIWKGVERPKFRWVEQQLSTKRTEDLVGR 281
            +L+AL++ KPLIE+QFPP+ NMATAALNELLDANR+FTRD++RSLVPKYDA DL VLFPDVGEARLA  VYG+VPF IGVIPKQ PE+++R G+A+IVNPGFNISEWI+IQNLVS DSKCTLVTVNADFDKVRG YYPRLFYPGLHKA++KVL RFEE+YYIKSFSNGGTLLRR+PE WKLFYA +DGT LIW+G ERP+FRWVEQQL  KR EDL GR
Sbjct:    1 MLKALSSGKPLIELQFPPISNMATAALNELLDANRAFTRDLMRSLVPKYDAKDLRVLFPDVGEARLARDVYGDVPFGIGVIPKQQPEFVQRAGVAVIVNPGFNISEWINIQNLVSEDSKCTLVTVNADFDKVRGGYYPRLFYPGLHKARDKVLKRFEEIYYIKSFSNGGTLLRRFPEGWKLFYADKDGTTLIWEGEERPEFRWVEQQLGRKRMEDLAGR 219          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A5J4Z109_PORPP (Protein LOW PSII ACCUMULATION 3, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z109_PORPP)

HSP 1 Score: 172 bits (435), Expect = 2.090e-48
Identity = 85/238 (35.71%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   49 PRTFPEVHAEATRSLLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGE---VPFRIGVIPKQVPEYIRRPGIA-------IIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNG-GTLLRRYPEEWKLFYAGRDGT--QLIWKGVERPKFRWVEQQLSTK 273
            PR +P+++ ++  ++  AL      +E++FP + NMAT+ALN++ DANR   R +  +L    DA  + ++FPD  EA LA+KV+GE   +PF +G +         R   A       ++VNPGFNI EW+ +++L        ++ +N   D+VR  YYPRLFYP LH+ K++ L +FE V++ K F +G GTL R++P +W+  +  +DG   +L+ +  +RP+++ VEQ    +
Sbjct:   59 PRDYPQLYVQSLEAIRAALKEKVQFLELEFPALRNMATSALNQIADANREHARALATALAADKDAGTVCLVFPDAKEAALATKVFGESTVLPFEVGSLAAAATMQAEREQPAGSTRTLFVVVNPGFNIEEWLQLESLHLGHPSDPILVINGGMDRVRSGYYPRLFYPKLHQTKDRFLCKFEPVFFYKPFGSGLGTLYRKFPADWQTLFHVKDGGGYRLLSQDAQRPEYKVVEQNFRAE 296          
BLAST of Gcaud910.t1 vs. uniprot
Match: M2Y6Q8_GALSU (DUF1995 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6Q8_GALSU)

HSP 1 Score: 146 bits (368), Expect = 8.350e-39
Identity = 78/233 (33.48%), Postives = 128/233 (54.94%), Query Frame = 0
Query:   46 LNLPRTFPEVHAEATRSLLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFR----IGVIPKQVPEYIRRPGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGTQLIWKGVERPKFRWVEQQLSTKR 274
            + LP +  ++  +   S   A+     L+E+QFPP+ N+ +AALN+++DANR+F + +V+            V+FPD  E++LA +   +  FR    + +   Q    ++   + +I+NPGF + EW +++   +   +  ++  NAD DK+RG YYPR  YP L+  K+K L +FE VYY++ F NG  L+RRYP  W++ Y        I +  ERP F+ V   L+  R
Sbjct:   46 IRLPESNVQLVQDIQESCKSAICDGLKLLEVQFPPLKNIGSAALNQVMDANRTFAKSVVQRFPHVSGNGTTFVVFPDDAESKLARE---DRDFRTLDSVFITSLQRDIDLQDASLVVILNPGFQVQEWFEVERFCNY--QVPVILFNADLDKLRGGYYPRFLYPKLYATKDKCLTKFEPVYYVRFFVNGA-LIRRYPNPWQIVYEEEGCLYCILERNERPDFQTVRNSLNQFR 272          
BLAST of Gcaud910.t1 vs. uniprot
Match: W7TLD5_9STRA (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLD5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 5.840e-37
Identity = 80/199 (40.20%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   52 FPEVHAEATRSLLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFRIGVIPKQVPEYIRRP-GIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRD 249
            + EV  +AT ++   L A    +EI+FP  P     +L E LD +R +TR+ VR   PK   A L V+FPD  EA LA K +G V FRI  I   +      P  + I V PGFN+ E+I+++ +        ++ VN + D++RG YYPR+FYPGL+  KE++L  FE VYY+K  + GG + R++PEEW+   A  D
Sbjct:   68 YAEVRKQATEAVQAGLKAGFEQMEIEFPISPGRIDVSLGEFLDDSREWTREFVRPFTPK--GAKLWVIFPDGKEATLAGKRWGGVNFRIMGIDTAMKASKDEPCELQIAVTPGFNVQEYINLEKV--RRPGVPMIVVNGNLDRIRGGYYPRIFYPGLYNVKERMLQYFEPVYYLKP-AQGGFIFRKFPEEWQQVLAYYD 261          
BLAST of Gcaud910.t1 vs. uniprot
Match: M1VKG6_CYAM1 (DUF1995 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VKG6_CYAM1)

HSP 1 Score: 139 bits (351), Expect = 1.410e-36
Identity = 80/234 (34.19%), Postives = 128/234 (54.70%), Query Frame = 0
Query:   47 NLPRTFPEVHAEATRSLLQALAA---NKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYG--EVPFRIGVIPK-QVPEYIRR---PGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGTQL-IWKGVERPKFRWVEQQL 270
            +LP+    +H +   +L +A      +  L E+ FP V +  TAAL+ +LDAN S  R++++     +    LH++FPDV EA++A KVYG  E  F +  +P  + P ++++   P +  +V PGFNI EW+ ++         ++V +N + D++R  YYP LFYP L   +++ L +FE +YY+K   NG  L R +PE W+ F+    G    I    ERP F    Q+L
Sbjct:    9 SLPKDTASLHRQVQNALSKATETKTRSPALYEVSFPAVRD-TTAALSRILDANTSHAREIIKPFAASFRKR-LHLVFPDVAEAKIAEKVYGSSEHTFTLSALPLYERPAFLQQVEAPALVFVVQPGFNIDEWLQLERPALLYPDASIVVLNGNMDRLRSNYYPPLFYPRLTALRKRYLEQFEPIYYLKPLPNG-LLFRVFPEPWQTFFCASPGEATRIAVDDERPTFPQTTQRL 239          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A836CP02_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP02_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.080e-35
Identity = 75/195 (38.46%), Postives = 112/195 (57.44%), Query Frame = 0
Query:   88 ALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVY-----GEVPFRIGVIPKQVPEYIRRPG---IAIIVNPGFNISEWIDIQNLVSNDSKC----------TLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGTQLIWK-GVERPKF 263
            +L E LDANR F R+++R+   K   A L  +F D GEA+LA+K +     G +PFR+  I + + +     G   + ++V PGFNI EWI +  L +  +K           ++V +N   DKVRG YYP+L YPGLH AK++ +  FE VYY+K+   G  L RRYPE+W++ YA R    ++ +    RP++
Sbjct:    8 SLGETLDANRGFARELMRAFSAKMGKA-LWAVFADPGEAKLAAKAFTGGASGSLPFRVTSIKEALGKRAAADGGCDLQLVVQPGFNIDEWIQLDTLYAAGAKARQAAGAAGQPSMVVLNGSLDKVRGGYYPKLVYPGLHAAKDRFIKNFEPVYYLKALPEGW-LFRRYPEDWQVIYAERGSDPVVLQTSSTRPEY 200          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A4D9D5M4_9STRA (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5M4_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.110e-35
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 0
Query:   74 IEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFRI-GVIPKQVPEYIRRPGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRD 249
            +EI+FP  P     +L E LD +R +TR+ VR   PK   A L V+FPD  EA LA K +G V FRI G+             + I V PGFN+ E+I+++ +        ++ VN + D++RG YYPR+FYPGL+K KE++L  FE VYY+K  + GG L R++PEEW+   A  D
Sbjct:    1 MEIEFPISPGRIDVSLGEFLDDSREWTREFVRPFTPK--GAKLWVIFPDGKEATLAGKRWGGVNFRIMGIDTAMKASKDEACELQIAVTPGFNVQEYINLEKV--RRPGVPMIVVNGNLDRIRGGYYPRIFYPGLYKVKERMLQYFEPVYYLKP-AQGGFLFRKFPEEWQQVLAYYD 172          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A6H5JFY8_9PHAE (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFY8_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.030e-33
Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 0
Query:   57 AEATRSLLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFRIGVIPKQVPEYIRRP-GIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGR 248
            AEAT+    A+ A   LIE++FPPV      +L E LDANRSF R++ RS   +   A        +  A LA   YG   FR+  I   + +       + I+VNPGF+++EWI + +LV  D    +V +N + DK+RG YYPR+F+PGL+ AKE+ L +FE VYY+K+   GG + RR PE+W++  A +
Sbjct:  156 AEATQD---AINAGINLIELEFPPVRGKLDISLGETLDANRSFARELARSFSARMGKA--------LWLAELAQNTYGGTTFRVVGINSAIKDLKDEECQMQIVVNPGFDVNEWIVLDSLVRPD--VPMVMLNGNLDKLRGGYYPRIFFPGLYNAKERFLKKFETVYYLKALP-GGWIFRRAPEDWQVVSAAQ 334          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A7J7INM7_9RHOD (DUF1995 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INM7_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 2.480e-32
Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 0
Query:   39 IPTCTASLNLPRTFPEVHAEATRSLL---QALAANKPLIEIQFPPVPNMATAALNELLDANRSFTRDMVRSLVPKYDAADLHVLFPDVGEARLASKVYG--EVPFRIGVIPKQVPEY----IRRPGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGT-QLIWKGVERPKFRWVEQQLST 272
            +P C  +  LPR   E+H +    L    Q       L EI FP V +   AAL+ LLDAN    +++++  V       LHV+FPD+ EA+ A + YG  E  + +  +P          I  P + ++V PGFN+ EW+ ++         T+V +N   D++R  YYP +FYP L   +++ L  FE +YY+K   NG  L R +PE W+   +G DG    I     RP F  VE++L T
Sbjct:  143 VPFCQWTA-LPRNTSELHGQVQGVLAKVQQRTTCYPALYEISFPAVKD-PNAALSRLLDANALHAQEIIKPFVVALRKR-LHVVFPDIAEAKQAQRTYGTREFLYTLTALPMYRKHAHLTEIEPPDLILVVQPGFNVEEWLQLERPSQLYPDATIVVLNGTMDRLRSNYYPPIFYPRLTALRKRYLEHFEPIYYLKPLRNG-MLFRVFPEPWQTLQSGPDGEFTCIAVDNARPSFAQVEERLGT 382          
BLAST of Gcaud910.t1 vs. uniprot
Match: A0A7S1TG32_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TG32_9RHOD)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 0
Query:  167 SEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYPRLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDGT 251
            SEWID++ L   D    +VT+NAD DKVRG+YYP+LFYPGLHK +++ L RFE +YY+K FS+GG L R YPE W+L    +DG+
Sbjct:    1 SEWIDMEKL---DVGVPIVTINADLDKVRGSYYPKLFYPGLHKVRDRFLCRFEPIYYLKPFSSGGYLFRAYPEPWQLLMVQKDGS 82          
The following BLAST results are available for this feature:
BLAST of Gcaud910.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3IVF9_9FLOR4.050e-13080.37DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
A0A5J4Z109_PORPP2.090e-4835.71Protein LOW PSII ACCUMULATION 3, chloroplastic n=1... [more]
M2Y6Q8_GALSU8.350e-3933.48DUF1995 domain-containing protein n=1 Tax=Galdieri... [more]
W7TLD5_9STRA5.840e-3740.20DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
M1VKG6_CYAM11.410e-3634.19DUF1995 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A836CP02_9STRA1.080e-3538.46DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
A0A4D9D5M4_9STRA2.110e-3542.37DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
A0A6H5JFY8_9PHAE1.030e-3340.41DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7J7INM7_9RHOD2.480e-3233.61DUF1995 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7S1TG32_9RHOD2.690e-2656.47Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 49..266
e-value: 1.9E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR34051:SF1PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC ISOFORM X1coord: 41..245
IPR044687Protein LOW PSII ACCUMULATION 3PANTHERPTHR34051PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTICcoord: 41..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_431_length_25724_cov_4.504896contigNODE_431_length_25724_cov_4.504896:3940..4785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud910.t1Gcaud910.t1Gracilaria caudata M_176_S67 malemRNANODE_431_length_25724_cov_4.504896 3940..4785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud910.t1 ID=Gcaud910.t1|Name=Gcaud910.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=282bp
MTIADRTPAFAFNSITSPFVSIRKRSDARCLHQRRRRPIPTCTASLNLPR
TFPEVHAEATRSLLQALAANKPLIEIQFPPVPNMATAALNELLDANRSFT
RDMVRSLVPKYDAADLHVLFPDVGEARLASKVYGEVPFRIGVIPKQVPEY
IRRPGIAIIVNPGFNISEWIDIQNLVSNDSKCTLVTVNADFDKVRGTYYP
RLFYPGLHKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEEWKLFYAGRDG
TQLIWKGVERPKFRWVEQQLSTKRTEDLVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995
IPR044687LPA3