Gcaud9098.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9098.t1
Unique NameGcaud9098.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length61
Homology
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A2V3IR68_9FLOR (DUF2235 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR68_9FLOR)

HSP 1 Score: 90.5 bits (223), Expect = 4.830e-20
Identity = 36/60 (60.00%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    2 PSKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAIDKIK 61
            PSKRICVFSDG+WN+P+LD L+N++ LA+A+QY  A G+PQ+ FYD GVG+EG  +D+++
Sbjct:    7 PSKRICVFSDGTWNTPELDTLTNIAILARALQYKSADGIPQIAFYDPGVGSEGGVVDRLR 66          
BLAST of Gcaud9098.t1 vs. uniprot
Match: K9VKY2_9CYAN (DUF2235 domain-containing protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 TaxID=179408 RepID=K9VKY2_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 5.150e-11
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    2 PSKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAI 57
            P KR+ V  DG+WN  D  C +NV  LAQAV+   + GVPQ+VFYDEG+G + + I
Sbjct:    4 PGKRLIVCCDGTWNKLDTQCPTNVVRLAQAVKRTASDGVPQIVFYDEGIGVDSNKI 59          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A1Y1QIL5_9GAMM (DUF2235 domain-containing protein n=1 Tax=Thiothrix lacustris TaxID=525917 RepID=A0A1Y1QIL5_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 3.980e-9
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    3 SKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAI 57
            +KR+ V  DG+W SPD DC +N+  L QA++  G  G+ QV++YDEGVG +   I
Sbjct:    2 AKRLMVCCDGTWQSPDNDCPTNIVKLVQALKNVGDDGLHQVIYYDEGVGADSHGI 56          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A1J5N238_9DELT (DUF2235 domain-containing protein n=1 Tax=Pseudodesulfovibrio hydrargyri TaxID=2125990 RepID=A0A1J5N238_9DELT)

HSP 1 Score: 60.1 bits (144), Expect = 4.350e-9
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    4 KRICVFSDGSWNSPD-----LDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAIDKI 60
            KRI +F DG+WNSPD     + C +NV  +A+AV+  G  GV Q +FYD GVG  G  + ++
Sbjct:    5 KRIAIFCDGTWNSPDTTSEGVSCATNVVRMAEAVRREGKDGVEQKMFYDPGVGASGSRLRRV 66          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A8B0SJI0_9GAMM (DUF2235 domain-containing protein n=1 Tax=Thiothrix fructosivorans TaxID=111770 RepID=A0A8B0SJI0_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 5.890e-9
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    3 SKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAI 57
            +KR+ V  DG+W SPD DC +N+  L QA++  G  G+ QV++YDEGVG +   I
Sbjct:    2 AKRLMVCCDGTWQSPDNDCPTNIVKLVQALKDVGDDGLHQVIYYDEGVGADSHGI 56          
BLAST of Gcaud9098.t1 vs. uniprot
Match: UPI0015C19036 (DUF2235 domain-containing protein n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015C19036)

HSP 1 Score: 58.5 bits (140), Expect = 1.520e-8
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    4 KRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTE 53
            KR+ V  DG+W      C SN+  LAQAV+ A   G+PQ+VFYD+G+GTE
Sbjct:    2 KRLVVCCDGTWQDLKSSCPSNIVKLAQAVKPASDDGIPQIVFYDQGIGTE 51          
BLAST of Gcaud9098.t1 vs. uniprot
Match: UPI00046E782F (DUF2235 domain-containing protein n=1 Tax=Methylobacillus glycogenes TaxID=406 RepID=UPI00046E782F)

HSP 1 Score: 58.5 bits (140), Expect = 1.530e-8
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    4 KRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAI 57
            KRI +F+DG+WNSPD    +NV  LAQ V+   A GV QV FYD G+G+EG+ +
Sbjct:    2 KRIAIFADGTWNSPDQARSTNVLSLAQGVK-PNAKGVEQVAFYDWGIGSEGNKL 54          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A6L8DD96_9GAMM (DUF2235 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8DD96_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 1.750e-8
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    3 SKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGT 52
            +KR+ V  DG+WNSP+   ++NV   A+AV+ A   GVPQ+VFYD G+G+
Sbjct:    7 NKRLIVCCDGTWNSPEQHHVTNVVRTARAVRPADDEGVPQIVFYDWGIGS 56          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A1T5LDA3_9GAMM (Uncharacterized alpha/beta hydrolase domain n=2 Tax=Pseudoxanthomonas indica TaxID=428993 RepID=A0A1T5LDA3_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 2.180e-8
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    4 KRICVFSDGSWNSPDLD-----CLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAIDKI 60
            KR+ +F DG+WN  D +     C SNV  LA  V   GA G+PQ+ +YD+GVGT G+ +D++
Sbjct:    5 KRLAIFCDGTWNQADQEHDGQACPSNVMRLATRVARTGADGLPQITYYDQGVGT-GNQLDRL 65          
BLAST of Gcaud9098.t1 vs. uniprot
Match: A0A2A4ARG9_9GAMM (DUF2235 domain-containing protein n=2 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A2A4ARG9_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 2.870e-8
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    4 KRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGVGTEGDAI 57
            KRI + +DG+W SP+ D  ++V  +AQAV  A A G  QVVFYD GVG+EGD +
Sbjct:    2 KRIVICADGTWQSPESDKPTHVLRIAQAVAPADAQGNRQVVFYDWGVGSEGDRL 55          
The following BLAST results are available for this feature:
BLAST of Gcaud9098.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR68_9FLOR4.830e-2060.00DUF2235 domain-containing protein n=1 Tax=Gracilar... [more]
K9VKY2_9CYAN5.150e-1151.79DUF2235 domain-containing protein n=1 Tax=Oscillat... [more]
A0A1Y1QIL5_9GAMM3.980e-947.27DUF2235 domain-containing protein n=1 Tax=Thiothri... [more]
A0A1J5N238_9DELT4.350e-945.16DUF2235 domain-containing protein n=1 Tax=Pseudode... [more]
A0A8B0SJI0_9GAMM5.890e-947.27DUF2235 domain-containing protein n=1 Tax=Thiothri... [more]
UPI0015C190361.520e-852.00DUF2235 domain-containing protein n=1 Tax=Nostoc s... [more]
UPI00046E782F1.530e-853.70DUF2235 domain-containing protein n=1 Tax=Methylob... [more]
A0A6L8DD96_9GAMM1.750e-850.00DUF2235 domain-containing protein n=1 Tax=Gammapro... [more]
A0A1T5LDA3_9GAMM2.180e-845.16Uncharacterized alpha/beta hydrolase domain n=2 Ta... [more]
A0A2A4ARG9_9GAMM2.870e-853.70DUF2235 domain-containing protein n=2 Tax=Pseudomo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018712Domain of unknown function DUF2235PFAMPF09994DUF2235coord: 4..55
e-value: 3.1E-8
score: 33.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_17741_length_297_cov_6.368932contigNODE_17741_length_297_cov_6.368932:2..279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9098.t1Gcaud9098.t1Gracilaria caudata M_176_S67 malemRNANODE_17741_length_297_cov_6.368932 2..279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9098.t1 ID=Gcaud9098.t1|Name=Gcaud9098.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=61bp
LPSKRICVFSDGSWNSPDLDCLSNVSYLAQAVQYAGASGVPQVVFYDEGV
GTEGDAIDKIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018712DUF2235