Gcaud9082.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9082.t1
Unique NameGcaud9082.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length156
Homology
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BLAST of Gcaud9082.t1 vs. uniprot
Match: A0A2V3J3X7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X7_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 1.260e-50
Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 0 
Query:    1 MPVEERADDEQVTVWLVASKEKGGVLLRGRAKGCLKRSCDRCGSAFDAESDGIFDVLLKSELEDVDESLYDYVQTVESDEIEVSGHVRDALYLGMQTRALCKEGCLGLTTHAQRNDEALPGHQMDEEVAEEGTIAHLAAGSALLEMKKRLEQRGL 155
            MP E+RADDEQV VWLVA++ KGG+LLRGRAKG LKR CDRCG++F+  +DG FDVLL    E+VDESL++ VQTVESDEIE+S HVRDALYLG+++RA+C E C G++   Q  ++       D+ +  E TI   +AG  L+EMK++LE+RGL
Sbjct:  101 MPKEDRADDEQVGVWLVATRAKGGLLLRGRAKGWLKRMCDRCGNSFEELADGTFDVLLNEGEEEVDESLFEDVQTVESDEIEMSRHVRDALYLGLKSRAICNEQCGGVSV--QNGEQWSVFKSGDQRIDAEETIGDRSAGDRLMEMKRKLEERGL 253
The following BLAST results are available for this feature:
BLAST of Gcaud9082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3X7_9FLOR1.260e-5058.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003772Large ribosomal RNA subunit accumulation protein YceDPFAMPF02620YceDcoord: 27..121
e-value: 2.1E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_313_length_30731_cov_4.564883contigNODE_313_length_30731_cov_4.564883:4999..5466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9082.t1Gcaud9082.t1Gracilaria caudata M_176_S67 malemRNANODE_313_length_30731_cov_4.564883 4999..5466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9082.t1 ID=Gcaud9082.t1|Name=Gcaud9082.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=156bp
MPVEERADDEQVTVWLVASKEKGGVLLRGRAKGCLKRSCDRCGSAFDAES
DGIFDVLLKSELEDVDESLYDYVQTVESDEIEVSGHVRDALYLGMQTRAL
CKEGCLGLTTHAQRNDEALPGHQMDEEVAEEGTIAHLAAGSALLEMKKRL
EQRGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003772YceD