Gcaud9075.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9075.t1
Unique NameGcaud9075.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
BLAST of Gcaud9075.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 3.520e-34
Identity = 74/202 (36.63%), Postives = 118/202 (58.42%), Query Frame = 0
Query:    1 MAITDVIDFTPKSTFSTAQFQSEALNTIATSLIIAFIIANFGSVINRLIFLSDRDILTYRSIARSYVFLNSDDVLKILYWVRGRYDFRTFDQPPAQ---------HKPCRRLLIVPVCARVLILAVNIASIAIALPSEKRLDACSRGDYALVQRTPKRPLVLSE--QQVDQQFDQPCTRIPLKTSLGTVLSSASYCSVRVAL 191
            M +   +D+TP  T ST QF++E +NT+ATSLI+ F++ N GS+INRL+F+SD+    YRS  R+++F++SDD+ ++ YW +G+  + +   P            ++  RR L++PVCAR+L++  +IASIA+ +P +K   +C R DY      P+   V     ++      + C  IP+ T  G V S  SYCS  + L
Sbjct:    1 MGLEGGVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLNPGGSGGGRAQRMLNRVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYE-----PQMGSVSPNFSEEPGGVLTRLCRDIPINTKRGDVSSKVSYCSTVLPL 197          
BLAST of Gcaud9075.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 8.830e-28
Identity = 69/193 (35.75%), Postives = 108/193 (55.96%), Query Frame = 0
Query:    1 MAITDVIDFTPKSTFSTAQFQSEALNTIATSLIIAFIIANFGSVINRLIFLSDRDILTYRSIARSYVFLNSDDVLKILYWVRGRYDFRTFDQPPAQHKPCRRLLIVPVCARVLILAVNIASIAIALPSEKRLDACSRGDYAL-VQRTPKRPLVLSEQQVDQQFDQPCTRIPLKTSLGTVLSSASYCSVRVALG 192
            M +   ++ TP  +FST Q  S+ +N +  SL+  F+I+N  SV ++LIF S      Y S  RS++F+NSDD ++I  W+  RY ++       +++   R L++P+ AR+ IL   I S+AI++PSEKRL  C +GD+ + +    ++P            ++ C  IPL T+LG V S  SYCS  V  G
Sbjct:    1 MTLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKPA--------PDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFG 185          
BLAST of Gcaud9075.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 2.350e-26
Identity = 69/193 (35.75%), Postives = 108/193 (55.96%), Query Frame = 0
Query:    1 MAITDVIDFTPKSTFSTAQFQSEALNTIATSLIIAFIIANFGSVINRLIFLSDRDILTYRSIARSYVFLNSDDVLKILYWVRGRYDFRTFDQPPAQHKPCRRLLIVPVCARVLILAVNIASIAIALPSEKRLDACSRGDYAL-VQRTPKRPLVLSEQQVDQQFDQPCTRIPLKTSLGTVLSSASYCSVRVALG 192
            M +   ++ TP  +FST Q  S+ +N +  SL+  F+I+N  SV ++LIF S      Y S  RS++F+NSDD ++I  W+  RY ++       +++   R L++P+ AR+ IL   I S+AI++PSEKRL  C +GD+ + +    ++P            ++ C  IPL T+LG V S  SYCS  V  G
Sbjct:    1 MTLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKPA--------PDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFG 185          
The following BLAST results are available for this feature:
BLAST of Gcaud9075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR3.520e-3436.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR8.830e-2835.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QQN3_CHOCR2.350e-2635.75Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1515_length_10035_cov_4.597647contigNODE_1515_length_10035_cov_4.597647:7626..8362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9075.t1Gcaud9075.t1Gracilaria caudata M_176_S67 malemRNANODE_1515_length_10035_cov_4.597647 7626..8362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9075.t1 ID=Gcaud9075.t1|Name=Gcaud9075.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MAITDVIDFTPKSTFSTAQFQSEALNTIATSLIIAFIIANFGSVINRLIF
LSDRDILTYRSIARSYVFLNSDDVLKILYWVRGRYDFRTFDQPPAQHKPC
RRLLIVPVCARVLILAVNIASIAIALPSEKRLDACSRGDYALVQRTPKRP
LVLSEQQVDQQFDQPCTRIPLKTSLGTVLSSASYCSVRVALGVIPTQKQF
LSLIEERQSSGYIAFMNLEH*
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