Gcaud9074.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9074.t1
Unique NameGcaud9074.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length251
Homology
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BLAST of Gcaud9074.t1 vs. uniprot
Match: A0A2V3IZV5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV5_9FLOR)

HSP 1 Score: 209 bits (533), Expect = 2.770e-64
Identity = 105/218 (48.17%), Postives = 140/218 (64.22%), Query Frame = 0 
Query:   30 LELTRVF-NLATRDTYALICKRAPDIADAFVFTDVPPEPLDTLGRSNATVHCITRVYRTLFANCTHLNATQFEHYAQPVLDECVHRAPISAADASDTRPFSFDRSRCKSKLAWSGNAMHSTVTFVCECLQSGFYEVLPGWPRFFLDGSEADTAVERQAMLQCASEADERMREVCLRRPGDYDVLGLQVLQACCKRVRVASTRKFACAPVVPRDLSALK 246
            +EL RV   L +R+ Y+L+CK AP +A   VF  VP  P +T G+S ATV+CI R  R L + C  LN T+F+ +A PVLD CV+   +++ +A  T+PF+F+  +C SK+AW+     ++V +VCEC Q  FYEV PGW ++ L G   D A E  A+ +CA EA E+M+EVC   P DY +LGL +LQ CCKR RV S  KF CA  VP DLS LK
Sbjct:   31 IELARVIIGLGSRNRYSLLCKCAPQVAK--VFFSVPVAPGETAGKSEATVNCIAREERRLTSMCNRLNETEFQRHAFPVLDRCVNHPILTSEEAEATQPFTFNTEKCSSKVAWTQGTRVTSVAWVCECSQFDFYEVTPGWAKYDLRGDAIDAAQEFTAIRRCAEEATEQMQEVCKNNPSDYYILGLHILQTCCKRARVNSEPKFECAAAVPDDLSQLK 246
The following BLAST results are available for this feature:
BLAST of Gcaud9074.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZV5_9FLOR2.770e-6448.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1515_length_10035_cov_4.597647contigNODE_1515_length_10035_cov_4.597647:842..1594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9074.t1Gcaud9074.t1Gracilaria caudata M_176_S67 malemRNANODE_1515_length_10035_cov_4.597647 842..1594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9074.t1 ID=Gcaud9074.t1|Name=Gcaud9074.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=251bp
MPPSTHTIFALLAALIVLATAAHHFNTDTLELTRVFNLATRDTYALICKR
APDIADAFVFTDVPPEPLDTLGRSNATVHCITRVYRTLFANCTHLNATQF
EHYAQPVLDECVHRAPISAADASDTRPFSFDRSRCKSKLAWSGNAMHSTV
TFVCECLQSGFYEVLPGWPRFFLDGSEADTAVERQAMLQCASEADERMRE
VCLRRPGDYDVLGLQVLQACCKRVRVASTRKFACAPVVPRDLSALKYEFR
*
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