Gcaud9070.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9070.t1
Unique NameGcaud9070.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length321
Homology
BLAST of Gcaud9070.t1 vs. uniprot
Match: S0F3X4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3X4_CHOCR)

HSP 1 Score: 305 bits (780), Expect = 5.210e-98
Identity = 171/325 (52.62%), Postives = 216/325 (66.46%), Query Frame = 0
Query:   10 DSTDVFSAIPYESDALSE--LPFPDEYGSGGKG--GGDXXXXXXXXXXXXXXEEMNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAP---VAGVSGG--------MLSALPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            D+  +    P ES    E  L  P   G+GG G  GGD              E  ++LL  +G + E LP+D+  L SA+L  +L A ++G  R+L+++W GWRRR+AAD  FPFK+ ME TVGLGLAASGMIAARG+ IL ELDFA CDIAVGGTLNF+LVYLL P   V G S G        M S LP+N F+ G++S+ +R ++F YKG LF  CGFAGS+VGTS+SQ L+ +R   +   G   +E+ LPNV +NS AWAGFM +S+NPRYQ VAG+ER +F   P AVAK GS  +RT NNV+GGA+WVWWARAIGLQ+
Sbjct:  107 DTAPLADMFPNESSLCREEDLSQPPSGGTGGGGQFGGDRGD-----------EGHSELLRKFGRADEVLPSDIAALPSAQLAAYLEATKNGFVRWLAKIWPGWRRRVAADPEFPFKVLMEETVGLGLAASGMIAARGKDILNELDFAFCDIAVGGTLNFILVYLLTPAILVGGASKGGALGRLGQMTSKLPANAFTAGAYSVGERLSSFFYKGTLFAICGFAGSLVGTSLSQVLVLLRRSFSSKEG-GVVEKPLPNVAINSAAWAGFMFLSANPRYQTVAGIERVLFTFAPDAVAKAGSGALRTANNVVGGAIWVWWARAIGLQA 419          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A2V3ILE5_9FLOR (Protein RETICULATA-RELATED 3, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILE5_9FLOR)

HSP 1 Score: 247 bits (630), Expect = 4.200e-77
Identity = 149/264 (56.44%), Postives = 180/264 (68.18%), Query Frame = 0
Query:   58 EEMNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSGG--MLSALPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            E+++ LL    +SR+QL   L QL     +T L+  Q+ +   LSR+W GWR R  AD +FPFK+ MELTVGLGLAASGMIAARG+RI +ELD ALCDIAVG TLNFMLVYLLAPVAG +GG   L+ LPSN FS G  S    A    + GA   A  F G V       A  +   LV + RG      ELPNV+ NS+AWAGFM VSSNPRYQ+VAG+ER +FA+ P+ VAK+GSA +RT+NNV GGA WVWWA+ IGLQ+
Sbjct:   44 EQLSTLLTSLKLSRDQLSAQLSQLPP---KTLLQTLQTLLNGPLSRLWPGWRYRTLADISFPFKVRMELTVGLGLAASGMIAARGKRIWKELDLALCDIAVGATLNFMLVYLLAPVAGAAGGAGFLARLPSNAFSDGRQSGWHDA----FSGAALPA-NFDGVV-------AFFSSFFLVCKRRGEET-RPELPNVLQNSLAWAGFMFVSSNPRYQSVAGLERVLFAVAPERVAKVGSAALRTINNVGGGANWVWWAKFIGLQT 291          
BLAST of Gcaud9070.t1 vs. uniprot
Match: M2Y5X5_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5X5_GALSU)

HSP 1 Score: 241 bits (616), Expect = 5.220e-74
Identity = 128/261 (49.04%), Postives = 180/261 (68.97%), Query Frame = 0
Query:   72 EQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSGGM---------LSALPSNVFSHGS----FSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            + LP  L  LS+ ++  +L     GV RFL++ W  W++++ AD  FPFK+ ME T+GLGL  SGMIAARG++IL+ELDFA+CD+ VG  +NF+LV+LL P   +   +         LS LP++ F+  S    FS++QR  AF+YKG LF +CGF GS+VGT+V+ +LL +R  + +    T+  R+LPN+ VNS+AWAGFM VSSNPRYQ ++G+ER MF + P +VA++ +  +RTVNN+ GGA WV +ARAIGLQ 
Sbjct:  120 QDLPQHLWFLSTEQVTAYLAVTSGGVVRFLAKAWPAWQQKLLADPNFPFKLLMEETLGLGLGFSGMIAARGKQILKELDFAICDLVVGAAMNFILVWLLTPTINIQQHLKSHGSWQRYLSNLPAHCFASSSSNVAFSLSQRIVAFLYKGLLFASCGFLGSMVGTTVAYSLLYIRRKMLKD---TSSSRQLPNLFVNSLAWAGFMFVSSNPRYQILSGIERLMFHIMPISVARISTGVLRTVNNIAGGASWVLYARAIGLQK 377          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A1X6PKC4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKC4_PORUM)

HSP 1 Score: 238 bits (608), Expect = 3.050e-72
Identity = 131/273 (47.99%), Postives = 173/273 (63.37%), Query Frame = 0
Query:   68 GMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSGGM----------------LSALPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAV---RALVARVR--GVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            G + EQLP +++  + A+   +L+A    +  FL+  W  WRR++  D AFPFK+ ME T+GLGLAASGM+AARG  I+ ELD   CDIAVGGTLNF+L ++L P A ++G                  LS LP+NVFS G+F+ AQRA   VYKG+LF   GF GS+VG + +  L+ +   RA VA     G+  ++  LP+V   S AWAG+M + +NPRYQ +AG+ER  F   P  VA+L SA  RTVNNV GG++WV WARAIGLQ 
Sbjct:  140 GRTFEQLPLEVRNAAPADAAAYLKATSGAIGGFLASYWPAWRRKVLGDPAFPFKLLMEETIGLGLAASGMVAARGANIMNELDLCACDIAVGGTLNFILTWMLTPSAPINGAAXXXXXXXXSPSVVGRTLSQLPANVFSAGAFTNAQRAGTAVYKGSLFSVAGFMGSLVGATTAATLVGIKRRRAAVATAAAGGIAVVDEPLPSVWATSAAWAGYMFLCANPRYQLLAGVERLAFERAPVRVAQLVSAAGRTVNNVAGGSLWVVWARAIGLQK 412          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A7S0Z2P2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2P2_9CRYP)

HSP 1 Score: 212 bits (539), Expect = 1.190e-63
Identity = 120/267 (44.94%), Postives = 165/267 (61.80%), Query Frame = 0
Query:   59 EMNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSG---GMLSA---LPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            E+  LL  YG+   QLP   ++L    L  FL A  + + ++L   W  WR ++ AD  F +K+ +E TVGLGLA SG +AARG+ +L+ELDF   D AVG  +NF++++LLAP  G +    G+ +A   LP+   + G +S+AQR  A VYKG+LF ACGF GS+ GT+++  L  VR L+    G  A    LPNV+ NS+ W  FM VS+NPRYQ + G+E+ M+   P    K GS  +RT NN++GGA WV WAR IGLQ 
Sbjct:   12 EIAALLKQYGVLASQLPKGAEKLDPKALGRFLEAYSNKLSKWLIDTWPAWRDKVLADPEFGYKLMVEETVGLGLAMSGTVAARGKDLLKELDFFFTDCAVGAVINFVIIWLLAPSVGKAAATTGLAAAVGNLPAFALAEGKYSVAQRVGAGVYKGSLFSACGFLGSLGGTTLAYILFQVRKLL-NPEGTQA--AALPNVLANSLGWGSFMFVSTNPRYQLINGIEQVMYKALPTGAGKAGSLVLRTGNNMVGGATWVLWARFIGLQK 275          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A7S3E8T8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8T8_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 1.560e-63
Identity = 119/271 (43.91%), Postives = 168/271 (61.99%), Query Frame = 0
Query:   60 MNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAP-VAGVSGGML------SALPSNVFS----HGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAME-RELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQ 318
            ++ +L  YG     L  +L+ LS+ +LR +L A +SG+  +L+ +W  WR ++AAD  F FK+ ME TVGLGLA  GM+AARG+ +L ELDFA CDI VG  LNF  +++ AP +A  +   L      S+LP NVF+        ++  R   F+  G  F   G    + GT +S  LL+VR   A+    +A++ ++LP ++ N+  WAGFM VSS+PRYQ VAG+ER MF   P AVAK  S   RT+NN++GGA WVW+AR++GLQ
Sbjct:   29 LSTVLAIYGKKESALTPELRGLSAEQLRAYLEATKSGLSGYLAEIWPAWRAKLAADPKFGFKLLMEETVGLGLAVIGMVAARGKEVLNELDFAFCDIVVGAVLNFTALWMAAPTIANDAQSSLALKRWISSLPPNVFAASPPSAKHTLVSRCLGFLVTGMKFSCVGLVAGLAGTCISYILLSVRN--AKSSEASAVKTKKLPGLIPNAFGWAGFMFVSSSPRYQLVAGLERGMFMWAPDAVAKTSSGLFRTMNNIVGGASWVWYARSVGLQ 297          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A7J7ILZ0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILZ0_9RHOD)

HSP 1 Score: 197 bits (501), Expect = 8.330e-57
Identity = 121/282 (42.91%), Postives = 166/282 (58.87%), Query Frame = 0
Query:   62 QLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAP------------VAGVSGGM------LSALPSNVFSHGS----FSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGL-QSG 320
            QLL     + E +P +L  L     R +L+A   G+PRFL+  +  WR +M AD  F FK+ ME TVG+GL  +G+I ARG+R+++ELDF L D  VG +L+F+L++LLAP            V G +  +      L  LPS   + G+    +   QRAAAF+YKG+LF   GFA  V+GTS+  ALLA+R    R  G    E  +P ++  S+ WAGFM VS+NPRYQ V   E  ++     A+AK  +A +RT N++ GGA WV WARA+GL QSG
Sbjct:   87 QLLRNMNRTAESIPRELFALDLESARRYLQATAGGLPRFLTDRFPAWRAKMLADPNFFFKLLMEETVGMGLCLTGVIIARGDRLMQELDFVLIDTLVGASLSFVLIWLLAPSIPMGSMIGQQPVKGNAWSLRRLQSYLGDLPSCALAPGTRLQHYDWTQRAAAFLYKGSLFAMAGFAAGVIGTSLGYALLALRK---RYTGCEP-ENRMPPILAMSLGWAGFMFVSANPRYQLVTATELWIYEKTSPAIAKASTAILRTTNSIAGGATWVLWARALGLNQSG 364          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A5J4YX07_PORPP (Protein RETICULATA-RELATED 3, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX07_PORPP)

HSP 1 Score: 193 bits (491), Expect = 3.440e-55
Identity = 106/265 (40.00%), Postives = 156/265 (58.87%), Query Frame = 0
Query:   59 EMNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSGGMLSALPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERE----LPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            E+  L+  +G + +     L +     ++ +L   ++   + +  +W G+ RR+  D  FPFK+ ME T+G+GLA SG +AARG  IL++LD    D+ VG +LNF+L+YLL P  G   G+LS LP+N F+ G+FS  QR A +V K ++F  CG A  ++GTS    +   +   AR    +   RE    LP V+ N + WA FMVVS+ PRYQ V+G ERA+F      VAK+  A +RT+NNV+GG+ WV  +R +GL  
Sbjct:  132 EIAALMAKHGKNIKDYSEQLLRFGPKHVQDYLEIMENPFVKRICSIWPGFHRRVLGDPEFPFKLLMEETLGVGLAGSGFVAARGMAILDDLDTFFLDMTVGFSLNFILLYLLTPTLGAKTGVLSRLPANAFAKGNFSFGQRVAGYVAKTSVFSLCGLAAGMLGTSAHYGIQYTKLRAARSPAKSKELREKIDALPGVIPNGLGWAAFMVVSAAPRYQLVSGAERALFDSASLPVAKVFCAVIRTINNVVGGSTWVMLSRRLGLSE 396          
BLAST of Gcaud9070.t1 vs. uniprot
Match: M1VD10_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VD10_CYAM1)

HSP 1 Score: 194 bits (492), Expect = 8.990e-55
Identity = 120/281 (42.70%), Postives = 165/281 (58.72%), Query Frame = 0
Query:   62 QLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRFLSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGV------------SGGMLSAL-------PSNVF----SHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            QLL       E +P +L  L     +T+L A  SG+PRFL+  +  W+ +M AD  F FK+ ME TVG+GL  +G++ ARG+R+++ELDF L D  VG  L+F+L++LLAP A +            + G +SAL       PS       S  S+S +QRA AF+YKG+LF   GF  SV+GTS+  ALLA+R    R+ G    E  +P +++ S+ WA FM VS+NPRYQ V   E  ++     AVAK  +A +RTVN++ GGA WV WARA GL  
Sbjct:  175 QLLRKMNRPVESVPRELFTLDLKTAQTYLVATASGLPRFLTDRFPAWQAKMLADPNFFFKLVMEETVGMGLCLTGVVLARGDRLMKELDFVLIDTLVGAALSFVLLWLLAPSATMQSLHQRHLSSSSNAGPVSALQHYFRTLPSCALAPASSATSYSWSQRAVAFLYKGSLFAIAGFMASVIGTSMGYALLALRK---RLTGKEP-ENRMPPILIMSLGWASFMFVSANPRYQVVTAAELFIYEKASPAVAKASTAILRTVNSIAGGATWVLWARAFGLNQ 451          
BLAST of Gcaud9070.t1 vs. uniprot
Match: A0A2I0A4Q3_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A4Q3_9ASPA)

HSP 1 Score: 147 bits (371), Expect = 3.800e-38
Identity = 92/217 (42.40%), Postives = 122/217 (56.22%), Query Frame = 0
Query:  107 GWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELDFALCDIAVGGTLNFMLVYLLAPVAGVSGG----MLSALPSNVFSHGSFSMAQRAAAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPNVVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVNNVLGGAVWVWWARAIGLQS 319
            GWR R++AD  FPFK+ ME  VG+     G +A R    L ELDF    + VG  LNF+L+YLLAP AG S G      S+LPS++F+  S+S   R  +  YKGA F A GFA  +VGTS+S  L+A+R    R+        + P  ++N++ WA  + VSSN RYQ + G+E  M    P    KL    +R +NNVLGG  +V  AR  G Q 
Sbjct:  110 GWRSRVSADPQFPFKVLMEELVGVSACVVGDMATRPNFGLNELDFVFSTLVVGSILNFVLMYLLAPTAGASVGAAPFFASSLPSHMFAPWSYSFLSRIGSLAYKGATFAAVGFAAGLVGTSISNGLIALRR---RIDSAFEPPNKPPPTLLNAVTWAIQLGVSSNIRYQTLNGLEFLMARALPPTGFKLSVVTLRCLNNVLGGMSFVVLARMTGSQK 323          
The following BLAST results are available for this feature:
BLAST of Gcaud9070.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S0F3X4_CHOCR5.210e-9852.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ILE5_9FLOR4.200e-7756.44Protein RETICULATA-RELATED 3, chloroplastic n=1 Ta... [more]
M2Y5X5_GALSU5.220e-7449.04Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1X6PKC4_PORUM3.050e-7247.99Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0Z2P2_9CRYP1.190e-6344.94Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S3E8T8_9RHOD1.560e-6343.91Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7J7ILZ0_9RHOD8.330e-5742.91Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YX07_PORPP3.440e-5540.00Protein RETICULATA-RELATED 3, chloroplastic n=1 Ta... [more]
M1VD10_CYAM18.990e-5542.70Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A2I0A4Q3_9ASPA3.800e-3842.40Uncharacterized protein n=1 Tax=Apostasia shenzhen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 111..276
e-value: 3.8E-42
score: 144.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..65
NoneNo IPR availablePANTHERPTHR31620PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATEDcoord: 34..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 183..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..250
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 167..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1927_length_7625_cov_3.826653contigNODE_1927_length_7625_cov_3.826653:5500..6462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9070.t1Gcaud9070.t1Gracilaria caudata M_176_S67 malemRNANODE_1927_length_7625_cov_3.826653 5500..6462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9070.t1 ID=Gcaud9070.t1|Name=Gcaud9070.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=321bp
MTVSKVVPSDSTDVFSAIPYESDALSELPFPDEYGSGGKGGGDGKGGNED
GEGGDDDEEMNQLLHGYGMSREQLPNDLKQLSSAELRTFLRAAQSGVPRF
LSRVWTGWRRRMAADSAFPFKIAMELTVGLGLAASGMIAARGERILEELD
FALCDIAVGGTLNFMLVYLLAPVAGVSGGMLSALPSNVFSHGSFSMAQRA
AAFVYKGALFGACGFAGSVVGTSVSQALLAVRALVARVRGVTAMERELPN
VVVNSMAWAGFMVVSSNPRYQAVAGMERAMFALCPQAVAKLGSAGVRTVN
NVLGGAVWVWWARAIGLQSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021825RETICULATA-related