Gcaud9069.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9069.t1
Unique NameGcaud9069.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length308
Homology
BLAST of Gcaud9069.t1 vs. uniprot
Match: A0A2V3IIU3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU3_9FLOR)

HSP 1 Score: 397 bits (1019), Expect = 2.930e-136
Identity = 182/290 (62.76%), Postives = 230/290 (79.31%), Query Frame = 0
Query:   16 FTSAVFLVQGSFFSVDGHVTHGVNSFNSEPLVNWSSSSLIFSTFPPLAEVGVINPSGANASLITDSTPLSSVMATIDAFDFQTFLMFPAGIGPFNIPLAETPTFNQFTSSITDRSPLLPFEASVDPEVVGQPYRSEGADASISLGEWNKAAARMTGVCRNGTAKVRVELQDVLPNGLFTLWDVGVISALTANETVSVGPFGGIPNVLASDERGRASITRKLNYCPFDECEGAARCTLFVSVNYHFDHVVFGGAPTLDFAGLAAGHVAANQMAFYLNGDVLVPPQNRFRRF 305
            F+S + L    +FSV GH+ HGVN FN   L N+SSSS IFS+FPPLAE+GVI P G NASLIT++TPLSS++ATIDAFDF+TFL FP G GPFNIP+++ PTFN F+SS+ +R     FE+S DP VVGQ Y S G + ++++ +WN+A  RMTG CRNGTA V +E+Q+ LPNGLF++WDVGV  AL  NET+S+ PFGGIPNVL +D  GR SI+R+LNYCP DEC+G++RC+L++S+NYHFDHVV+GGAPTLDF GL+AG VAANQ+ F LNGDVL+P  N+F  F
Sbjct:   15 FSSFLLLANARYFSVPGHIAHGVNDFNDNLLANYSSSSNIFSSFPPLAEIGVITPGGTNASLITENTPLSSIVATIDAFDFRTFLGFPPGAGPFNIPISQAPTFNLFSSSLLERVTPSSFESSSDPNVVGQVYLSAGVNDNVTVADWNRATGRMTGTCRNGTAHVYIEMQNALPNGLFSMWDVGVSMALAPNETLSLSPFGGIPNVLTTDRNGRGSISRRLNYCPLDECQGSSRCSLYLSMNYHFDHVVYGGAPTLDFGGLSAGQVAANQLVFILNGDVLIPVHNKFSFF 304          
BLAST of Gcaud9069.t1 vs. uniprot
Match: A0A2A5HEK6_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2A5HEK6_9ALTE)

HSP 1 Score: 144 bits (364), Expect = 2.600e-37
Identity = 88/280 (31.43%), Postives = 138/280 (49.29%), Query Frame = 0
Query:   30 VDGHVTHGVNSFNSEPLVNWSSSSLI---FSTFPPLAEVGVINPSGANASLITDSTPLSSVMATIDAFDFQTFLMFPAGIGP--FNIPLAETPTFNQFTSSITDRSPLLPFEASVDPEVVGQPYRSEGADASISLGEWNKAAARMTGVCRNGTAKVRVELQDVLPNGLFTLWDVGVISALTANETVSVGPFGGIPNVLASDERGRASITRKLNYCPFDEC-EGAARCTLFVSVNYHFDHVVFGGAPTLDFAGLAAGHVAANQMAFYLNGDVLVPPQNRFR 303
            + G+  HGVN FN+  LV+++S        +  P L E+G   P   +A  ITD T  +  +AT  +     F      + P  FN  L    +      S TDR  L+PFE +      G  Y + G ++  ++GEW + +      C +    V + ++D  PN L++LWD+GV++  T +E V   PFGG+PNV+ +DE G         +CP   C EG A C+ ++S+ YH+D  ++GGA    F GL  G +  N + + + G  +  P N F+
Sbjct:   32 ITGYAAHGVNVFNNHTLVDYTSEFPYAPGLNEIPALTEIGYFQPGADDAGTITDETDSNLPVATSSSL--ARFFGVVDFVDPSNFNQSLDLIGSNLMGYQSTTDRGLLVPFELAGP----GDTYVAGGVNSRPTVGEWGEISGVARIRCDDDGGVVEISVRDAFPNQLYSLWDIGVLNPKTESEVVYSTPFGGLPNVMTTDENGCGYKKITTPFCPKRSCAEGEASCSAYISLFYHWDDQIYGGAAANTFGGLPLGVLGGNHIVWPMAGTAVNEPANEFK 305          
BLAST of Gcaud9069.t1 vs. uniprot
Match: A0A4R5H990_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5H990_9ALTE)

HSP 1 Score: 103 bits (257), Expect = 7.590e-22
Identity = 87/282 (30.85%), Postives = 131/282 (46.45%), Query Frame = 0
Query:   30 VDGHVTHGVNSFNSEPLVNWSSSSLIFSTFPPLAEVGVINPSGANAS-LITDSTPLSSVMATID----AFDFQTFLMFPAGIGPF----------NIPLAETP-TFNQFTSSITDRSPLL--PFEASVD----PEVVGQPYRSEGADASISLGEWNKAAARMTGVCRN-GTAKVRVELQDVLPNGLFTLWDVGVISALTANETVSVGPFGGIPNVLASDERGRASITRKLNYCPFDECEGAARCTLFVSVNYHFDHVVFGGAPTLDFAGLAAGHVAANQMAF 288
            V G    G N F  + L  +    ++  +F    +VG  +P       L TD+     V+ATI     +FD       P G  P           NIP+ + P T + F         LL  P EA+      P ++ QP         I+LG+W  A  R++  CR+ GTA+V     +++PNGL+++W +  I+   A +  S  PFGG+PNV+ ++ERGRA  +R+L +CP +E E  +   L+VSV YH D  +  G    + AG     V  N  +F
Sbjct:   40 VRGVPVTGTNRFCGQLLWTFEDQGVVPLSF---RQVGAHHPGSERPDELTTDNCTSDQVLATIHDPVLSFD-------PPGPAPAIVPAPDVRLENIPIRDVPRTPDGFQGGGAGVRTLLQSPDEATNPSNPFPALLNQP------SDQITLGDWASAKGRLSYTCRDDGTAEVSARFSNLVPNGLYSMWGIWRITIPFAGDITSASPFGGVPNVVTTNERGRARFSRELPFCPSEESEDGS-LLLWVSVVYHADSAISAGVA--ETAGAVVQFVDVNGESF 302          
BLAST of Gcaud9069.t1 vs. uniprot
Match: A0A3B1CIP4_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CIP4_9ZZZZ)

HSP 1 Score: 83.2 bits (204), Expect = 5.000e-15
Identity = 60/182 (32.97%), Postives = 89/182 (48.90%), Query Frame = 0
Query:  111 IPLAETPTFNQFTSSITDRSPLLPFEASVDPEVVGQPYRSEGADASISLGEW-NKAAARMT-GVCRNGTAKVRVELQDVLPNGLFTLWDVGVISALTANETVSVGPFGGIPNVLASDERGRASITRKLNYCPFDECEGAARCTLFVSVNYHFDHVVFGGAPTLDFAGLAAGHVAANQMAFYL 290
            +PL + PT       IT+       + S+  E   +     G    I+ G+W N   +++   V  NG +K+R++++ +LPN L+T+W   V+           GPFGGIPN LA+D +G AS+ R L   PF+  E   R  L     YH DH V+GG P+     + AGH    Q+ F L
Sbjct:   82 VPLRQVPTLY-----ITEGLEPAIIDESISAENPMRGLAFPGMPNPITYGDWVNIGESKLVVKVLDNGMSKIRMKVKGLLPNSLYTVWQFNVMPG-------PPGPFGGIPNALATDHKGNASLRRIL---PFNVLEKVGRLMLI----YHSDHSVYGGTPSR--INVFAGHDQHVQLLFDL 242          
The following BLAST results are available for this feature:
BLAST of Gcaud9069.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IIU3_9FLOR2.930e-13662.76Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2A5HEK6_9ALTE2.600e-3731.43Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
A0A4R5H990_9ALTE7.590e-2230.85Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
A0A3B1CIP4_9ZZZZ5.000e-1532.97Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1927_length_7625_cov_3.826653contigNODE_1927_length_7625_cov_3.826653:3928..4851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9069.t1Gcaud9069.t1Gracilaria caudata M_176_S67 malemRNANODE_1927_length_7625_cov_3.826653 3928..4851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9069.t1 ID=Gcaud9069.t1|Name=Gcaud9069.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=308bp
MKVITGPQLPSFVLVFTSAVFLVQGSFFSVDGHVTHGVNSFNSEPLVNWS
SSSLIFSTFPPLAEVGVINPSGANASLITDSTPLSSVMATIDAFDFQTFL
MFPAGIGPFNIPLAETPTFNQFTSSITDRSPLLPFEASVDPEVVGQPYRS
EGADASISLGEWNKAAARMTGVCRNGTAKVRVELQDVLPNGLFTLWDVGV
ISALTANETVSVGPFGGIPNVLASDERGRASITRKLNYCPFDECEGAARC
TLFVSVNYHFDHVVFGGAPTLDFAGLAAGHVAANQMAFYLNGDVLVPPQN
RFRRFWR*
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