Gcaud9044.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9044.t1
Unique NameGcaud9044.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length377
Homology
BLAST of Gcaud9044.t1 vs. uniprot
Match: A0A2V3IYA0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA0_9FLOR)

HSP 1 Score: 299 bits (766), Expect = 4.970e-96
Identity = 176/328 (53.66%), Postives = 214/328 (65.24%), Query Frame = 0
Query:    7 ESISFLSLGIGAGISSPQQGVFGTSTVLGNGNFASTSTAASGDTVSGSTSVISPVEVT--ESDVLSPPAGSPEAESNIDISSLLGRGLQADVPDYRDASVSPGNTYT-TGKSGNHETKSTKNVSEEKSGNVHRPKVCWTMSKQCCYEEVQKGYECKDFYEYKYARCHPVIDYEEVCGEIRERPVHHPRPKGRVKYEETVLKNYDARYGPHVAGYKERGESEYYRTDYIPTKPRGVSGTPFPAPQSYQSGNGG---KTNGEDDARGTYGNTLSVAPYETKNNA-QTSGAGRPQSAEKKGTKPI----QKTTKSGTTGAGGTYKMSGEPE 323
             ++SF S+G+GAG  SP+ GVFG S VLGNGN A+  T  SG  VSG+TSVISP   T  E DV++  AGSP A  N+D+SSLL R ++A VPDYRD   S G T T + +    + K  K  S  ++   H PK+CWT+SK CCYEEVQKGYECKD+Y YKYARCHPVI+++EVCG+I+E P  HPRPKGRVKYEE+VLKNYDA YGPHVAGY + GESEYYRTD IP+KP GV+   +PAPQ+Y+SG+GG   KT  +  A  T     S    ET +   Q SGA +P   E  G        Q  +KS    A G    SG  E
Sbjct:   22 RAVSFSSIGLGAGAGSPKFGVFGLSGVLGNGNIAAVGTGGSGGGVSGATSVISPAGKTSNEGDVVA--AGSPGAIPNMDLSSLLARPVEA-VPDYRDTGASRGYTSTESSERKKRKVKVKKKTSSWQTEGRHAPKMCWTVSKHCCYEEVQKGYECKDYYAYKYARCHPVIEFDEVCGDIKETPAEHPRPKGRVKYEESVLKNYDANYGPHVAGYPKDGESEYYRTDTIPSKPHGVTENAYPAPQAYESGSGGGTYKTENKQSANETEIIVESSEVGETGSQGYQASGAEQPYDGETAGNSAENAVEQNMSKSSEEDAAGGSYASGSAE 346          
BLAST of Gcaud9044.t1 vs. uniprot
Match: A0A2V3IL68_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL68_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 3.540e-21
Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 0
Query:  139 VCWTMSKQCCYEEVQKGYECKDFYEYKYARCHPVIDYEEVC--GEIRERPVHHPRPKGRVKYEETVLKNYDARYGPHVAGYKERGESEYYRTDYIPTKPRGVSGTP-FPAPQ 247
            +CW  +K+CCY E   GYECKD+Y +KYARC+    Y   C   E   +P    +PK RV+  +    +YD  YGPHV GY    ESE+Y ++ +P KP GV G P +PAP+
Sbjct:   91 MCWMETKKCCYIEKADGYECKDYYAHKYARCYAKFKYVRRCDKAESHGKP---EKPKPRVEKSKCQKVHYDQNYGPHVEGYPTDAESEWYDSEELPKKPYGVKGEPQYPAPR 199          
The following BLAST results are available for this feature:
BLAST of Gcaud9044.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYA0_9FLOR4.970e-9653.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL68_9FLOR3.540e-2144.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..376
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..376
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_352_length_28950_cov_4.408088contigNODE_352_length_28950_cov_4.408088:9383..10513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9044.t1Gcaud9044.t1Gracilaria caudata M_176_S67 malemRNANODE_352_length_28950_cov_4.408088 9383..10513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9044.t1 ID=Gcaud9044.t1|Name=Gcaud9044.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=377bp
MMFPFVESISFLSLGIGAGISSPQQGVFGTSTVLGNGNFASTSTAASGDT
VSGSTSVISPVEVTESDVLSPPAGSPEAESNIDISSLLGRGLQADVPDYR
DASVSPGNTYTTGKSGNHETKSTKNVSEEKSGNVHRPKVCWTMSKQCCYE
EVQKGYECKDFYEYKYARCHPVIDYEEVCGEIRERPVHHPRPKGRVKYEE
TVLKNYDARYGPHVAGYKERGESEYYRTDYIPTKPRGVSGTPFPAPQSYQ
SGNGGKTNGEDDARGTYGNTLSVAPYETKNNAQTSGAGRPQSAEKKGTKP
IQKTTKSGTTGAGGTYKMSGEPEQRHGKTSKSNSESKTGATGTVTQDQTK
AGYDTPATLASPSQGNMPSYRIARQT*
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