Gcaud9043.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9043.t1
Unique NameGcaud9043.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length218
Homology
BLAST of Gcaud9043.t1 vs. uniprot
Match: A0A2V3IL68_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL68_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 1.640e-84
Identity = 130/194 (67.01%), Postives = 149/194 (76.80%), Query Frame = 0
Query:   31 YKATATPTPYVTA---AP---EYRATQPSYATPTPPPGGYTAPETGPEYVPSPAPYAGGE-APAMDNMCWMETKKCCYKEEADGYECKDYYAEKYARCYAKFKYVRKCDKAEKHGKPEKPEDRVERTKCQKVYYDKNYGPHVQGYPANGESQWYDSKELPMKPHGVEGEPQYQAPRYEAEAVPAGASYVPPANY 217
            Y+ +  PTP+ TA   AP   +Y ATQPSYATPTPPP GYTAPET        AP    +     DNMCWMETKKCCY E+ADGYECKDYYA KYARCYAKFKYVR+CDKAE HGKPEKP+ RVE++KCQKV+YD+NYGPHV+GYP + ES+WYDS+ELP KP+GV+GEPQY APRYEAE V A + Y  P  Y
Sbjct:   31 YRPSVAPTPHYTATTTAPPTAQYAATQPSYATPTPPPEGYTAPETS-------APTTDEKYTTETDNMCWMETKKCCYIEKADGYECKDYYAHKYARCYAKFKYVRRCDKAESHGKPEKPKPRVEKSKCQKVHYDQNYGPHVEGYPTDAESEWYDSEELPKKPYGVKGEPQYPAPRYEAEPVYANSGYETPPRY 217          
BLAST of Gcaud9043.t1 vs. uniprot
Match: A0A2V3IVJ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ2_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 3.210e-64
Identity = 104/185 (56.22%), Postives = 127/185 (68.65%), Query Frame = 0
Query:   31 YKATATPTPYVTAAPEYRATQPSYATPTPPPGGYTAPETGPEYVPSPAPYAGGEAPAMD----NMCWMETKKCCYKEEADGYECKDYYAEKYARCYAKFKYVRKCDKAEKHGKPEKPEDRVERTKCQKVYYDKNYGPHVQGYPANGESQWYDSKELPMKPHGVEGEPQYQAPRYEAEAVPAGASY 211
            Y+ +A P PY T  P    +   Y   TP P  Y+AP++G +Y  +  P    +   MD    NMCWMETKKCCY EEADGY+CKDYYA KY+RCYAKFK VRKCD+AE+HGKPE+P+ RV R +C K YYDKNYGPHV+GYP+ GES WYD+K+LP KP+GV+ EPQYQ P    E     + Y
Sbjct:    9 YQPSAAPAPYQT--PTNNPSSTEYDKSTPLPDNYSAPKSGKDYASTQNPPT--DEIHMDENTNNMCWMETKKCCYLEEADGYKCKDYYAHKYSRCYAKFKTVRKCDRAEEHGKPERPKPRVNRKECTKQYYDKNYGPHVEGYPSGGESVWYDAKDLPKKPYGVQSEPQYQIPSQIPEEFSKNSGY 189          
BLAST of Gcaud9043.t1 vs. uniprot
Match: A0A2V3IYA0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA0_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 1.250e-23
Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   91 MCWMETKKCCYKEEADGYECKDYYAEKYARCYAKFKYVRKC-DKAEKHGKPEKPEDRVERTKCQKVYYDKNYGPHVQGYPANGESQWYDSKELPMKPHGVEGEPQYQAPR-YEA 202
            MCW  +K CCY+E   GYECKDYYA KYARC+   ++   C D  E   +  +P+ RV+  +     YD NYGPHV GYP +GES++Y +  +P KPHGV  E  Y AP+ YE+
Sbjct:  154 MCWTVSKHCCYEEVQKGYECKDYYAYKYARCHPVIEFDEVCGDIKETPAEHPRPKGRVKYEESVLKNYDANYGPHVAGYPKDGESEYYRTDTIPSKPHGVT-ENAYPAPQAYES 266          
The following BLAST results are available for this feature:
BLAST of Gcaud9043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IL68_9FLOR1.640e-8467.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVJ2_9FLOR3.210e-6456.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYA0_9FLOR1.250e-2348.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_352_length_28950_cov_4.408088contigNODE_352_length_28950_cov_4.408088:6622..7452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9043.t1Gcaud9043.t1Gracilaria caudata M_176_S67 malemRNANODE_352_length_28950_cov_4.408088 6622..7452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9043.t1 ID=Gcaud9043.t1|Name=Gcaud9043.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=218bp
MLHGIITIKGVSFNVRRCQNGIGAVDRSASYKATATPTPYVTAAPEYRAT
QPSYATPTPPPGGYTAPETGPEYVPSPAPYAGGEAPAMDNMCWMETKKCC
YKEEADGYECKDYYAEKYARCYAKFKYVRKCDKAEKHGKPEKPEDRVERT
KCQKVYYDKNYGPHVQGYPANGESQWYDSKELPMKPHGVEGEPQYQAPRY
EAEAVPAGASYVPPANY*
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