Gcaud9016.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9016.t1
Unique NameGcaud9016.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length145
Homology
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A2V3IIS8_9FLOR (30S ribosomal protein S7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS8_9FLOR)

HSP 1 Score: 232 bits (592), Expect = 1.820e-76
Identity = 114/142 (80.28%), Postives = 130/142 (91.55%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHF 142
            MSLHLSDPIVHKLVR+IMK GKKHAAL+IVDDAFHILR++HNV SP+ L HRAV NA PVVET+ YKA GR + VP+PC PKRSQSLAMRFIRDAFRERKE+GGGLKLA+EL AL+K++GGA++RREE+HKRAEANRAFAHF
Sbjct:    1 MSLHLSDPIVHKLVRMIMKHGKKHAALKIVDDAFHILRSKHNVGSPIALFHRAVANAAPVVETRGYKASGRTVHVPLPCGPKRSQSLAMRFIRDAFRERKENGGGLKLANELFALEKRQGGAYSRREEMHKRAEANRAFAHF 142          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A1X6P3Z7_PORUM (Ribosomal_S7 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z7_PORUM)

HSP 1 Score: 145 bits (367), Expect = 3.290e-42
Identity = 69/144 (47.92%), Postives = 106/144 (73.61%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHFMK 144
            MSL + DP++ ++  + M+ G+K  ++ ++++A   LR +H V  PV+ +  AV NA P+VET ++KAGGRA+Q+P+PCRP R++SLA+R +RD+FR RKEHG GL+LA+EL  L KK G    RR+++H+ AEAN+A+ +F K
Sbjct:    1 MSLLMRDPMMARMACMFMRHGEKTKSMALIEEAVVELRRRHGVERPVEFIRSAVENAKPLVETVKWKAGGRAIQMPVPCRPARAESLALRMLRDSFRLRKEHGAGLRLAAELVDLSKKTGRTRGRRDDMHRAAEANKAYVYFRK 144          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A7S0T3W4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T3W4_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 8.340e-38
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAF 139
            MS H  D +V ++VR+ M+ GKK  + +I+D A  IL+  HN+  P+ +L+ AV NA P+VET+     GR + +P P  P+R +SLA+RFIRDA RER E+G  L+LA+E+  L KK+GGA  RR+  H+ AEANRAF
Sbjct:   17 MSFHARDAMVSRMVRIFMRHGKKTTSQKIIDGAMGILKRDHNIQDPLKMLYEAVQNAKPLVETRPVINAGRKVLIPRPVSPERQESLALRFIRDAMRERNENGSPLRLANEILELHKKQGGARRRRDNQHRTAEANRAF 155          
BLAST of Gcaud9016.t1 vs. uniprot
Match: M1VCX2_CYAM1 (Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX2_CYAM1)

HSP 1 Score: 131 bits (330), Expect = 1.310e-36
Identity = 69/142 (48.59%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFR-ERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAH 141
            MSL+ +D ++ KLV ++M+DGKK  A RIVD+AF IL+ ++ V  P      A+  A PVVE  RY+  GR LQVP P  P R+ +LA+R IRDA R ER+E G   +LA+EL  + +++G A+ RR++LHK AEAN+ F H
Sbjct:    1 MSLYTADSVLSKLVNILMRDGKKSTAQRIVDEAFWILKREYQVPDPASYAKEAIEQAKPVVELTRYRLSGRNLQVPSPLMPHRATALALRAIRDAVRSERRERGAAARLAAELVDIHRQQGVAWKRRQDLHKMAEANKMFTH 142          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A7S0ZCK2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCK2_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 2.250e-34
Identity = 63/137 (45.99%), Postives = 90/137 (65.69%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANR 137
            MS    DP++ +LVR++M DGKK  +++IVD A  IL+ +H +  PV  ++ AV  A P++E       GR + VP P  PKR + LA+R+IRDA R RKEHG  L+LA+EL  L  K+GGA  +R++ H+ AE+NR
Sbjct:    1 MSFLQKDPLISRLVRILMWDGKKITSMKIVDGALMILKREHKIQDPVQFVYHAVEQAKPLIENFSMVVAGRRVPVPRPVYPKRQEGLALRYIRDAMRARKEHGSALRLANELLDLSNKQGGARKKRDDQHRIAESNR 137          
BLAST of Gcaud9016.t1 vs. uniprot
Match: M2XY53_GALSU (30S ribosomal protein S7 (Plastid) isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY53_GALSU)

HSP 1 Score: 125 bits (315), Expect = 2.610e-34
Identity = 63/141 (44.68%), Postives = 96/141 (68.09%), Query Frame = 0
Query:    2 SLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHF 142
            SL+ SD ++ K+V + M+DG+K  +L+++D+AF  L+ +H V  P+ L+HRAV  A P+V    +   G+ + VPIP +P++    A+RFI+ A  +RKEH G ++LA+EL  L K  GGA  RR++LH+ AE NRA+AHF
Sbjct:    3 SLYKSDVVIGKMVNIFMRDGEKGVSLKLIDEAFRELKVKHGVKDPLSLVHRAVDIAKPLVALIPHYPHGKKVAVPIPLKPEQQLGKALRFIKQAVADRKEHYGHVRLANELLELSKGAGGAKKRRDDLHRLAEQNRAYAHF 143          
BLAST of Gcaud9016.t1 vs. uniprot
Match: H5SGQ8_9BACT (30S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 RepID=H5SGQ8_9BACT)

HSP 1 Score: 116 bits (291), Expect = 1.450e-30
Identity = 63/136 (46.32%), Postives = 88/136 (64.71%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHF 142
            D +V K + VIM+DGKK  A RIV +AF I+R +     P++  H+A+ N  PVVE +  + GG   Q+P+  R  R  +LAMR+I+   RER++    LKLA+EL A    EGGA  +R+E+H+ AEANRAFAH+
Sbjct:   19 DVMVAKFINVIMRDGKKSIARRIVYEAFDIIR-ERTKKDPLETFHKAITNVAPVVEVRSRRIGGANYQIPMEVREDRRIALAMRWIKQYARERRDKSMALKLAAELIAAANGEGGAIRKRDEVHRMAEANRAFAHY 153          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A7S2ZRL3_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRL3_9RHOD)

HSP 1 Score: 113 bits (282), Expect = 2.800e-29
Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHFM 143
            DP+V K ++ I     + AA +++ +AF IL+T++ V+ PVD L R + N  P V TKR    GR+L +P+PC   + +     F+R+ FRER++     +L  EL AL K EG +   R+ LH+ AE+NRAF HF+
Sbjct:    6 DPVVLKFIKKISVHNDEVAARKVIQEAFFILKTKYGVADPVDCLRRGIKNCSPAVLTKRRVVAGRSLNIPVPCDENQGRKKGFIFLREGFRERRDSTAAERLCKELMALQKMEGNSINMRDNLHRMAESNRAFVHFL 142          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A2H0KBP0_9BACT (30S ribosomal protein S7 n=1 Tax=Candidatus Taylorbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_46_11 TaxID=1975025 RepID=A0A2H0KBP0_9BACT)

HSP 1 Score: 111 bits (277), Expect = 1.940e-28
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    6 SDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHF 142
            + P V KL+   M+DGKK AA +IV  AF +++ Q    +P+++   A+ N  P++E +  + GG   QVP+  RP+R  SLA R++ DA R++K     +KLA EL    K EG A  +RE +HK AEAN+AFAHF
Sbjct:   18 NSPKVTKLINYCMEDGKKEAARKIVFGAFDVIKKQEKTENPLEVFDNALKNITPLMEVRSRRVGGANYQVPVEVRPERRTSLAFRWVIDAARKKKGRPMHVKLAEELILASKNEGDAVKKRENVHKMAEANKAFAHF 154          
BLAST of Gcaud9016.t1 vs. uniprot
Match: A0A0P1P405_9BACT (30S ribosomal protein S7 n=3 Tax=Candidatus Kryptonia TaxID=1855361 RepID=A0A0P1P405_9BACT)

HSP 1 Score: 110 bits (274), Expect = 5.350e-28
Identity = 64/137 (46.72%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    6 SDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLLHRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERKEHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHF 142
            +D +V KL+  +MKDGKK  A +IV +AF I+R +     P+++  +AV N  P++E +  + GG   QVPI  RP+RS SLA+R+I    RERK     +KLA EL A  + EG A  +RE+ HK AEAN+AFAHF
Sbjct:   18 NDVLVAKLINKVMKDGKKSIARKIVYNAFEIIRKKTG-QDPLEVFKKAVENVKPILEVRPRRVGGATYQVPIEVRPERSISLALRWIVQYARERKGKPMMVKLAEELMAAARNEGLAVKKREDTHKMAEANKAFAHF 153          
The following BLAST results are available for this feature:
BLAST of Gcaud9016.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS8_9FLOR1.820e-7680.2830S ribosomal protein S7 n=1 Tax=Gracilariopsis ch... [more]
A0A1X6P3Z7_PORUM3.290e-4247.92Ribosomal_S7 domain-containing protein n=1 Tax=Por... [more]
A0A7S0T3W4_9RHOD8.340e-3848.92Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
M1VCX2_CYAM11.310e-3648.59Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidi... [more]
A0A7S0ZCK2_9RHOD2.250e-3445.99Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2XY53_GALSU2.610e-3444.6830S ribosomal protein S7 (Plastid) isoform 1 n=1 T... [more]
H5SGQ8_9BACT1.450e-3046.3230S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 ... [more]
A0A7S2ZRL3_9RHOD2.800e-2940.15Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A2H0KBP0_9BACT1.940e-2843.0730S ribosomal protein S7 n=1 Tax=Candidatus Taylor... [more]
A0A0P1P405_9BACT5.350e-2846.7230S ribosomal protein S7 n=3 Tax=Candidatus Krypto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..144
e-value: 3.6E-40
score: 136.0
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 5..142
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 2..143
e-value: 5.1E-42
score: 145.0
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 5..140
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 6..137
e-value: 2.9E-39
score: 134.1
NoneNo IPR availablePANTHERPTHR11205:SF1928S RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 5..142
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 7..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_294_length_31947_cov_4.688316contigNODE_294_length_31947_cov_4.688316:6644..7143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9016.t1Gcaud9016.t1Gracilaria caudata M_176_S67 malemRNANODE_294_length_31947_cov_4.688316 6644..7143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9016.t1 ID=Gcaud9016.t1|Name=Gcaud9016.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=145bp
MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQHNVSSPVDLL
HRAVVNAGPVVETKRYKAGGRALQVPIPCRPKRSQSLAMRFIRDAFRERK
EHGGGLKLASELAALDKKEGGAFARREELHKRAEANRAFAHFMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR023798Ribosomal_S7_dom
IPR020606Ribosomal_S7_CS