Gcaud8969.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A2V3IRG1_9FLOR (General transcription factor IIH subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRG1_9FLOR) HSP 1 Score: 692 bits (1786), Expect = 6.450e-248 Identity = 356/463 (76.89%), Postives = 401/463 (86.61%), Query Frame = 0
Query: 1 MPSYPSSQAVPLSATLFTDIAEWSKQNPDLLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQQPH----FSLHPVFARELRRSVTSEIQPVLGGGRGGSDPHELDNFAADRLESILNFLVESTNDSSVPSSIIDALLHIGVLEQRREGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPANVEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDFHHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIKSNGIQ 459
MPSY SQ+VPLSAT+FTDI WS NP LLD LY SPYAVQ +FRSLPPLARLYVTRL+YLPE+ES PT+EAFRKSLRRRQRALDRH+AA++AL+ L VF + H LHP FARELRRSV++ I V GGG G SDP +LD+FAADRLESILNFLVESTN +S+PS IIDAL+HIGVLEQRREGL ITSAGF FLLKDTSAQLWILLRSVLSSMFPA+VEAL+LVF++ + AGR YDI NL+ TQQ L+RELH+LG+VI+++ +F+VT+VG RLLANA+RSSAGP+D MTLTK+AGEIQ+FVETNFRVYAYTTS FQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLN+HAHPRMKKG IPANVSDEIRLWEAEQ RVQ++PGVLLSDF HGFES LSY+RDL AVLWS+PER MLVV+K FDQVK FI+ +GIQ
Sbjct: 1 MPSYLRSQSVPLSATIFTDITHWSATNPQLLDALYQSPYAVQSVFRSLPPLARLYVTRLLYLPENESTPTLEAFRKSLRRRQRALDRHDAAIRALRELRVFTTSPSGLNASLHDPSKIVLHPTFARELRRSVSNSIPSVFGGGSGSSDPKDLDSFAADRLESILNFLVESTNHNSIPSGIIDALVHIGVLEQRREGLTITSAGFHFLLKDTSAQLWILLRSVLSSMFPADVEALTLVFQLGVSTAGRFYDISNLSATQQELIRELHHLGIVILNKNTFQVTVVGVRLLANATRSSAGPSDGMTLTKSAGEIQVFVETNFRVYAYTTSVFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNAHAHPRMKKGTIPANVSDEIRLWEAEQDRVQTKPGVLLSDFSHGFESVLSYARDLNAVLWSAPEREMLVVSKNTFDQVKRFIRDSGIQ 463
BLAST of Gcaud8969.t1 vs. uniprot
Match: R7QRW5_CHOCR (General transcription factor IIH subunit 4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRW5_CHOCR) HSP 1 Score: 462 bits (1188), Expect = 6.690e-157 Identity = 248/474 (52.32%), Postives = 339/474 (71.52%), Query Frame = 0
Query: 6 SSQAVPLSATLFTDIAEWSKQNPDLLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASD----DRIQQPHFSLHPVFARELRRSVTSEIQPVLGGGRGGSD----------PHELDNFAADRLESILNFLVESTNDSSVPSSIIDALLHIGVLEQRREGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPAN-VEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIM-DRASFRVTLVGTRLLANASRSSAGPN---DTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDFH--HGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIKSNGI 458
S A LS ++F D+A+ + ++ L+ LY SP+AVQC+FR+LPP+ARLYV R++YLP ++ ++++FR+ LRRRQRA DRH++A+ ALKALHV V+ ++ L+ FA LRRSVT ++PV GG + ++D F+A +L+ ILNFLVES ++ +++ AL +G+LE + GL ITS+GF+FLLKD+ AQLW+LLRS++++ F ++A L+F+++FAC G+ Y +L+ Q+ L+ ELH LG+V + + A+FR T VG RLL +ASR +GP D ++ K AGEI+IFVETNFRVYAYTTS FQ NLLALFTHMRY+LPSMVVGHLTRDAVR+ALM+GIT DQIIGYLN+HAHPRMK+G+IP+NVSDEIRLWEAEQ RVQ+ PGVLLSDF FE +SY+ DLGA +WS +R ++VA+E + V+ F+ SN +
Sbjct: 3 SDSAPGLSQSIFEDLADAAAKSKRLITRLYESPHAVQCVFRALPPIARLYVARIIYLPSNQEV-SVDSFRQCLRRRQRAYDRHDSAILALKALHVLVEVETLVDGPGRKETRLQLNDKFAENLRRSVTYGVEPVFGGPCEDIEMVDVESREVVTKKMDEFSAAKLDRILNFLVESNGSNAPGGTVVQALAQVGILESKSIGLCITSSGFQFLLKDSFAQLWVLLRSIVNTQFRGEELDAWELIFKLSFACPGKEYRDPHLSKCQRELMAELHELGIVRLGEDATFRPTTVGVRLLTSASRIQSGPASTADASSMVKIAGEIEIFVETNFRVYAYTTSNFQTNLLALFTHMRYKLPSMVVGHLTRDAVRRALMSGITGDQIIGYLNAHAHPRMKRGVIPSNVSDEIRLWEAEQDRVQTTPGVLLSDFESQEAFEKVMSYAYDLGASVWSDRDRLKVIVAREAYGSVRGFMNSNDL 475
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A5J4YU96_PORPP (General transcription factor IIH subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU96_PORPP) HSP 1 Score: 263 bits (673), Expect = 2.570e-79 Identity = 178/482 (36.93%), Postives = 270/482 (56.02%), Query Frame = 0
Query: 16 LFTDIAEWSKQNPDLLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHE-SPPTIEA-FRKSLRRRQRALDR------------HEAALKALKALHVFVQASDDRIQQPHFSLHPVFARELRRSVTSEIQPVLGGGRGGSDP--------HELDNFAADRLESILNFLVESTNDS---SVPSS-IIDALLHIGVLEQRREGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPAN----VEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRA--SFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDFHHGFESTLSY------SRDLGAVLWSSPERGMLVVAKEYFDQVKSFIKSNGIQ 459
+F ++ +WS+ + + + S +A + R +P LARL V R++ S + A F + R A R H ++ L LHV V+ + + P + L P FA + + +T+ ++P + L+ FA R E +L+FLV S ++S S PS +++ALL +LE EGL IT GF+FLLKDT AQ+W LL +L +FPA V+A+ L+F++A A G+ Y + L Q L+ LG+V + +F VT +G L+ N+ + + L+ GE+Q+ VETNFRVYAYT+S+FQI LL+LF MRYRLP++VVGH+T+ +VR A+ NGITA+Q++ +LN+H HP ++K IP VSDE+ LWEAEQ RV++ V++ GFESTLS+ + ++ A+LWS+P R MLVV E + VK +I+ ++
Sbjct: 18 MFQELEQWSRSD---MQRAFRSEHAAHAVLRCVPNLARLVVMRMLLGSSRTCSASELSAWFAQDGHRSDYAKSRSGGQTPIATGHSHTRVVEPLLRLHV-VRLVESAVP-PFYELDPAFADRMDQILTANVRPPFDSEHESNSVVLDSPALVQRLEVFAKRRWERVLHFLVGSDSESASVSGPSDELVNALLKTRLLENCEEGLRITHVGFQFLLKDTYAQIWSLLACMLEHLFPAGSQHRVDAMGLLFQIALAVPGKPYKLSCLDANQSRFLKCCDELGLVQVGEKEQAFCVTRMGVNLV-NSKQEDVASHSGGHLSVDMGELQLIVETNFRVYAYTSSSFQIALLSLFLDMRYRLPNLVVGHITKSSVRAAMSNGITAEQLVRFLNAHLHPMVEKACIPPCVSDELYLWEAEQDRVRTDDAVMID----GFESTLSFDALTTHANEIDALLWSNPRRLMLVVKAEKAEGVKQYIREQALR 489
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A7S3ENT9_9RHOD (General transcription factor IIH subunit 4 n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENT9_9RHOD) HSP 1 Score: 240 bits (612), Expect = 3.430e-72 Identity = 144/325 (44.31%), Postives = 201/325 (61.85%), Query Frame = 0
Query: 147 ELDNFAADRLESILNFLV----ESTNDSSVPSSIIDALLHIGVLEQRREGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPANVEA----LSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRA---SFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDFH--HGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIKSNGI 458
EL++F + ES+L+FLV STN + P +II AL I +L EGL ITS GF+FLL+D +Q+W+LL +++S+ +++A L +FEM ++ G Y I +L + L LG+V +F T VG RL+AN S G D ++ + G +I VETNFR+YAYTTS Q++L+++F HMR RLP++ VGH+T ++VR AL NGI+A+QII YLN+HA R + G IP+NVS IRLWEAE+ RV+++ GVL F F+ Y+ ++ A LWSS LVVA DQVK+FIKSN I
Sbjct: 8 ELESFGQRKWESVLHFLVGMDPNSTNKTKPPKAIIKALRRINLLNDTGEGLKITSKGFQFLLRDPYSQVWVLLLELVNSVSNGSIKAKREVLEFLFEMNYSEPGAGYKISDLKDGPVAAMEALVALGLVYKPSRQSDTFFPTKVGRRLVANTG--SGGRTDEKNVSASLGTCEIIVETNFRLYAYTTSKLQVDLISMFVHMRTRLPNLAVGHITNESVRMALRNGISAEQIIAYLNAHASSRCRSGRIPSNVSQMIRLWEAEKDRVKTKSGVLFDKFETEEAFDMVEKYAFEMDAKLWSSRILKTLVVADRAADQVKTFIKSNRI 330
BLAST of Gcaud8969.t1 vs. uniprot
Match: UPI001455B061 (general transcription factor IIH subunit 4-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455B061) HSP 1 Score: 240 bits (613), Expect = 8.760e-71 Identity = 156/441 (35.37%), Postives = 242/441 (54.88%), Query Frame = 0
Query: 30 LLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQQ--PHFSLHPVFARELRRSVTSEIQPVLGGGRGGSDPH-----ELDNFAADRLESILNFLVESTNDSSVPSSIIDALLHIGVLEQRREGLN-ITSAGFRFLLKDTSAQLWILLRSVLS---SMFPANVEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRAS---FRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRM--KKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDF--HHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSF 452
+LD+LY P +FR LP LA+ YV R++++ + ++E++ + L++H+ + L L ++ D+ + P + L+P+F LR ++ +P G G+ D + L+ +A DR E +L+FLV S D S+ I L H G+++ +G IT +GF+FLL DT++Q+W + L S V+ALS +F ++F+ G+ Y E++T +Q L+ L LG+V + F T + L + S S T + E I VETN+RVYAYT S Q+ +L LFT M YR P++ VG LTRD+V+ A+ NGITA+QI+ YL +HAHP M + I+PA +SD+IRLWE E+ R+ + GV+ + F FE Y++DLG ++W +P + LVV D VK F
Sbjct: 25 VLDKLYNHPATCLAVFRELPTLAKHYVNRVLFVEQPVRKASVESWVQKAH-----LEKHKKCAQILSDLRIW---HDNTLPGGLPGWQLNPIFKANLRIALLGGGKPWSGTGKTAPDKNAKDIDSLNRYAMDRWELVLHFLVGSKGDESLSPDIAGVLTHSGLMKISEDGQPVITPSGFQFLLLDTASQVWFFMLQYLETAESRVLDLVDALSFLFRLSFSTLGKDYSCEDMTESQLQFLQHLRELGLVFQRKRKCMRFYPTSLAISLASGISSVS---------TDSHREGFIVVETNYRVYAYTESDLQVEILGLFTQMLYRFPNLAVGALTRDSVQAAVSNGITAEQILHYLRTHAHPEMLSRIPIVPATISDQIRLWELEKDRLTFQSGVVYNQFLSSQEFEVLRDYAKDLGVLMWENPGKRTLVVTPTGHDDVKKF 448
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A6P7VQ62_IXOSC (General transcription factor IIH subunit 4 n=16 Tax=Ixodidae TaxID=6939 RepID=A0A6P7VQ62_IXOSC) HSP 1 Score: 237 bits (604), Expect = 1.920e-69 Identity = 159/465 (34.19%), Postives = 254/465 (54.62%), Query Frame = 0
Query: 7 SQAVPLSATLFTDIAEWSKQ-NPDLLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQQPHFSLHPVFARELRRSVTSEIQP-----VLGGGRGGSDPHELDNFAADRLESILNFLVESTNDSSVPSSIIDALLHIGVLEQRREGLN---ITSAGFRFLLKDTSAQLWILLRSVLSSMFPAN---VEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIM-DRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKG--IIPANVSDEIRLWEAEQGRVQSRPGVLLSDF--HHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIK 454
S + P S+ D+ + K +P LD+LYT P +FR LP ++R Y+ RLM++ + + ++ + Q+ + H +L+AL ALH++ +S P +SL VF + ++ ++ QP L + G D LD +A +R E +L+F+V + + + LLH G+++ E + IT GF+FLL DT++Q+W + L ++ VE L+ +F+++F G+ Y E ++ + L+ L G+V R S R TRL N + +G +T + AG I VETN+RVYAYT S Q+ LLALF + YR P++VVG LTR++VR+AL +GIT++QII +L HAHP +K ++P + D++RLWE E+ R R GVL S F F+ +Y+ DLG ++W +P + ++VV + D+VK F K
Sbjct: 2 SLSAPSSSLKCNDLHAYLKTLSPATLDQLYTHPATCLAVFRELPIISRHYIMRLMFVDQPVPQAVVSSWNE-----QKYVKEHLESLEALTALHIWADSSLPG-GLPGWSLSGVFRKNIQIALLGGGQPWAVYSTLEKDKHGRDAQFLDRYAMERWECVLHFMVGCHTKEGISADAVRILLHAGLMKSEEEEGSAPLITMEGFQFLLMDTASQVWHFVLQYLDTLESRGLNLVECLTFLFQLSFLTLGKDYSTEGMSESLLVFLQHLREFGLVYQRKRRSGR--FYPTRLAINLA---SGLKETNLRSYEAG--YIVVETNYRVYAYTDSQLQVALLALFCELMYRFPNLVVGVLTRESVRQALRSGITSNQIIRFLQMHAHPEAQKQSPVVPPTIMDQLRLWELERDRFNFREGVLYSQFISQSDFQLLRNYASDLGVLIWDNPSKRVMVVNRNGHDEVKRFWK 453
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A6P7SKC6_OCTVU (General transcription factor IIH subunit 4 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SKC6_OCTVU) HSP 1 Score: 234 bits (597), Expect = 1.870e-68 Identity = 166/448 (37.05%), Postives = 242/448 (54.02%), Query Frame = 0
Query: 29 DLLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRI--QQP------HFSLHPVFARELRRSVTSEIQPVLGGGRGGSDPHE-----LDNFAADRLESILNFLVESTNDSSVPSSIIDALLHIGVLEQRREGLN--ITSAGFRFLLKDTSAQLWILLRSVLSSMFPAN---VEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRM--KKGIIPANVSDEIRLWEAEQGRVQSRPGVLLSDF--HHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIK 454
++LD+LY P +FR LP LA+ V R++++ E P + A A HE +A+ A+ +D R+ +QP F L+ F ++ ++ QP GGG D H LDN+A DR E +L+F+V S++ V I LLH G+++ E IT GF+FLL DTS+Q+W + L+++ VE+LS +F+++F+ G+ Y E ++ Q LL+ L G+V + + T+L N + + +D + I VETN+RVYAYT S QI LLALFT M YR P+MVVG +TRD+VR AL GI+ADQII +L SHAH +M K +IP V+D+IRLWE E+ R + GVL + F FE Y+RDLG ++W P + ++VVA+ D+VK F K
Sbjct: 25 NVLDKLYNHPATCLAVFRELPELAKHCVMRILFV-EQPVPQAVVAH-------WVANKHHEEQKQAMAAV------TDLRVWHEQPLPGGMMGFILNQTFRMNMKTALLGGGQPWTGGGSLPPDKHAKDIAFLDNYAQDRWECVLHFMVGSSD--CVSRDIKWVLLHAGLMKAESEDQAPVITPNGFQFLLMDTSSQVWFFMLQYLNTLATRGMDLVESLSFLFQLSFSIFGKDYTTEGMSEAQLRLLQHLREFGLVYQRKRKSQ-RYYPTKLAINLAAGLSQVSD-----NAIRQGFIVVETNYRVYAYTDSQLQIALLALFTEMIYRFPNMVVGQITRDSVRSALSCGISADQIIHFLKSHAHEKMLEKMPVIPPTVTDQIRLWELERDRFKFTDGVLYNQFLSQSDFELLRDYARDLGVLVWDKPSKRVMVVARNGHDEVKRFWK 450
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A2R6WYY1_MARPO (RNA polymerase II transcription factor B subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WYY1_MARPO) HSP 1 Score: 232 bits (591), Expect = 1.720e-67 Identity = 152/443 (34.31%), Postives = 251/443 (56.66%), Query Frame = 0
Query: 31 LDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQQPHFSLHPVFARELRR------SVTSEIQPVLGGGRGGSDPHELDNFAADRLESILNFLVEST--NDSSVP--SSIIDALLHIGVLE--QRREGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPANV---EALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKG--IIPANVSDEIRLWEAEQGRVQSRPGVLLSDFH--HGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIK 454
LDELY SP+ Q + RSLPPLA+ YV RL+++ S +I+ + AL++H+ A+ L+ L V ++A++ R ++ + L+P ++L+ V E P R S +L+N+A + E++L LV S S+VP S++ G++ + +E IT AGF+FLL DT++QLW ++R ++S + E +S + E+ F G Y++ L+ QQ +++EL LGV+ + + + T+L +N S S + + GE + VETNFR+YAYTTS Q +L LF + Y+LP++VVG LT+++V A +GI++D++I +L+ HAHP K ++P V+D+IRLWE ++ RVQ P + +F FE+ +Y+RD+GA+LW P LV E +++++FI+
Sbjct: 23 LDELYGSPWTCQAVVRSLPPLAKQYVLRLLFVEAAVSSKSIQDWALP-----DALNKHKVAIDKLEQLRVLIEATERR-KEVSYKLNPRLQKQLQDVLKTGGGVPRESLPASFAARVPSLV-DLENYAMKQWEAVLLQLVSSAFAEASTVPMNSTLTATFQRAGLITTPKGKEPPKITDAGFQFLLMDTNSQLWQIVREYVASAEDRGMDSAELISFLLELGFLNIGEPYNLNTLSPMQQNVIKELAALGVLQIQSGTKDRWFIPTKLASNLSASISETSGVQ-----PGEGFVVVETNFRIYAYTTSKLQAEILRLFVRLEYQLPNLVVGSLTKESVSTAFASGISSDEMISFLSKHAHPHAAKKTPVVPETVTDQIRLWENDRNRVQMSPAYMYKEFPTVETFEAVDNYARDIGALLWDEPSTQRLVGKAERHEEMRNFIR 453
BLAST of Gcaud8969.t1 vs. uniprot
Match: A0A2U1LYY2_ARTAN (RNA polymerase II transcription factor B subunit 2 n=5 Tax=Asteraceae TaxID=4210 RepID=A0A2U1LYY2_ARTAN) HSP 1 Score: 230 bits (587), Expect = 5.190e-67 Identity = 146/448 (32.59%), Postives = 247/448 (55.13%), Query Frame = 0
Query: 31 LDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQQPHFSLHPVFARELRRSVTSEIQPVLGGGRGGSDP------------HELDNFAADRLESILNFLVESTNDSSVPSSIIDALLHI---GVLEQR-REGLNITSAGFRFLLKDTSAQLWILLRSVLSSMFPANVEA---LSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKGI--IPANVSDEIRLWEAEQGRVQSRPGVLLSDF--HHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIKS 455
LD+LY + + + I RSLPPLA+ YV +L+Y+ + P T + ++ + +H A+ L L VF + D R ++ + L+P+F LR + ++ GG +P ELDN+AA + E L L+ S SI +++ + G+L QR REG +T +GF+FLL DT+AQLW ++R +S+ V++ +S + E++F G +Y+I L Q+T +++L +LG++ + + + T+L N S S + + + + VETNFR+YAY+TS +L LF+ + Y+LP+++VG +T++ + KA NGITADQII +L +AHPR+ + + +P NV+D+IRLWE++ RV+ P L DF FE+ ++R+ ++LW ++ L+V E + +K F+ +
Sbjct: 23 LDKLYENAFICEAILRSLPPLAKKYVLQLLYI---DVPVTANSLQEWVL--ADGASKHRVAVDRLIQLRVFTETVD-RKKEATYRLNPMFQMNLR-------EHIVHGGVLPREPMAANITVRLPSLEELDNYAAQQWECFLLHLINSAEAEVTTKSISASMMKVFQRGLLSQRDREGSRLTESGFQFLLMDTNAQLWYIIREYISNSEDRGVDSADLISFLLELSFHVTGEAYNINTLDDVQRTTVKDLADLGLIKLQQGRKDSWFIPTKLATNLSISLSDASSRK-------QGYVVVETNFRLYAYSTSKLHCEILKLFSRVEYQLPNLIVGSITKENLYKAFANGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFLDDFPSRDVFEAACDFAREYSSLLWEDSKKMRLIVKTEIYAHMKEFLNN 450
BLAST of Gcaud8969.t1 vs. uniprot
Match: UPI001EB0608E (general transcription factor IIH subunit 4-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0608E) HSP 1 Score: 230 bits (587), Expect = 5.600e-67 Identity = 156/442 (35.29%), Postives = 238/442 (53.85%), Query Frame = 0
Query: 30 LLDELYTSPYAVQCIFRSLPPLARLYVTRLMYLPEHESPPTIEAFRKSLRRRQRALDRHEAALKALKALHVFVQASDDRIQ--QPHFSLHPVFARELRRSVTSEIQPVLGGGRGGSDPHE-----LDNFAADRLESILNFLVESTNDSS-VPSSIIDALLHIGVL-EQRREGL-NITSAGFRFLLKDTSAQLWILLRSVLSSMFPAN---VEALSLVFEMAFACAGRSYDIENLTMTQQTLLRELHNLGVVIMDRASFRVTLVGTRLLANASRSSAGPNDTMTLTKTAGEIQIFVETNFRVYAYTTSAFQINLLALFTHMRYRLPSMVVGHLTRDAVRKALMNGITADQIIGYLNSHAHPRMKKG--IIPANVSDEIRLWEAEQGRVQSRPGVLLSDF--HHGFESTLSYSRDLGAVLWSSPERGMLVVAKEYFDQVKSFIK 454
+LD LY+ P +FR LP L R YV R++++ + S + + + + + H A+K+L L V+ D + P + L+ F + L+ ++ P GGG D H LD +A +R E +L+F+V S+ + V IID LLH G++ E+ E L +I+ AGF+FLL DT +Q+W + L S+ VE LS +F+++F+ G+ Y E ++ +Q L+ L G+V + + TRL N + N T + + VETN+RVYAYT S Q LLALF M YR P+M V +L+RD+VR AL GITA+QII +L SHAHP M K +IP V D++RLWE E+ R + GV+ + F + FE Y++DL ++W +P + +++V++ D VK F K
Sbjct: 23 ILDRLYSHPATCLAVFRELPELGRHYVMRILFVEQPVSQTVVGQWISNKHQEE-----HRFAVKSLSDLRVW---HDQPLPGGMPGWLLNHTFRKNLKIALLGGGDPWTGGGPLPQDKHAKDVSFLDKYALERWECVLHFMVGSSEGTDGVSKDIIDVLLHSGLMKEETSEPLPSISPAGFQFLLLDTGSQVWFFMLQYLESVEARGMDLVECLSFLFQLSFSTLGKDYCTEGMSESQLKFLQHLREFGLVYQRKRKSQ-RYYPTRLAINIASGLTTFN-----TDSHSSGYLVVETNYRVYAYTDSPLQTALLALFCQMLYRFPNMAVANLSRDSVRAALTRGITAEQIINFLRSHAHPEMMKTTPVIPLTVCDQVRLWELERDRFKFTDGVMYNQFLSQNDFELLRDYAQDLNVLVWDNPSKRVMIVSRGGHDDVKRFWK 450 The following BLAST results are available for this feature:
BLAST of Gcaud8969.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8969.t1 ID=Gcaud8969.t1|Name=Gcaud8969.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=460bpback to top |