Gcaud8907.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8907.t1
Unique NameGcaud8907.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length293
Homology
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3IVU2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU2_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 4.790e-30
Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 0
Query:   55 VEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTNAQ 152
            +E+AIPS  V F C  TP AGSCT FLS++DTV AA NAR+DAR SNNEL  H FEAQ  +MD+HNDIV   DALEELD I+A+MT+EEE E+   A+
Sbjct:    1 MENAIPSGIVLFRCHPTPSAGSCTKFLSVLDTVVAADNAREDARFSNNELFGHGFEAQRALMDVHNDIVIAIDALEELDEIKAYMTSEEENEILAKAR 98          
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3IN05_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN05_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 3.800e-28
Identity = 78/244 (31.97%), Postives = 123/244 (50.41%), Query Frame = 0
Query:   43 MCTRSSCAVYTSVEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTNAQALRDLAIECEQKSFEISLSSRDALTTSITAHDMVSVAADAEKEAEMAEVKLGEEESKASKXXXXXXXXEKLKKDIKRLTQQRKEAAINAGSAAKGCNSKRSEGRSLLQDIHERRMKCRDAREKVLATIAQVRKR 286
            MCTRS CA+YT+ E+A+PSET PFGC LT  AG+CT F  +M +V A  N + +     + ++    E   +V  I  D++  NDAL+ +D +R  M+ +E  ++  +   + D   E  + +   S   R     S     + + A  A ++AE+AE +L  EE++A K          L+ D++RL  + K A I AG  AK         R     I E R +  + R KV+  + +V++R
Sbjct:    5 MCTRSRCALYTAKENALPSETTPFGCHLTIDAGTCTRFDYVMHSVTAVDNMQTEVNSVTDAILNENLEVYEMVAAIEADVIVTNDALKSMDQMRNEMSAQEIEKIEKDGDLVIDAVEEAGRLALAASQDGRKVYKGSRNLARLAAKARKANRDAEVAEKRLKSEETRAEKDGTECTTCPGLRDDVERLKSEGKNAVIAAGQVAKQAREDSRNARDNRNKIKELRSQSDERRGKVVEAVEEVKRR 248          
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3IKT6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKT6_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 4.190e-28
Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 0
Query:   55 VEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTNAQ 152
            +EDAI S  VPF   LTPGAGSCTTF+S++DTV  A NAR+DAR  NNELV H FEA+  V+ + NDIV   DALEELD I+A+MT+EEE +++T A+
Sbjct:    1 MEDAITSGIVPFCWHLTPGAGSCTTFVSVLDTVVVANNAREDARFPNNELVGHVFEAKQGVIVVQNDIVVAIDALEELDDIKAYMTSEEENQIFTKAR 98          
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3ISV1_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 1.020e-25
Identity = 62/160 (38.75%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   43 MCTRSSCAVYTSVEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTNAQALRDLAIECEQKSFEISLSSRDALTTSITAHDMVSVAADAEKEAEMAEVK 202
            MC R+ CA+YT+VE+ IPSE+VPFGC LTP AG CT F  M+DT+ AA NA  +A  SN+   A+  E+  +V    +D+ AVN+AL  ++  R  +++EE  E+  +A+ +R  A E  +++ ++SL + +         D+   A+  +KEA+ A+ K
Sbjct:   80 MCKRTKCAMYTAVENVIPSESVPFGCHLTPDAGQCTAFDHMLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAREALQVSLKAAEVNKERRLVADLKKTASKRDKEAKRAKDK 239          
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3IH85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH85_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 1.750e-25
Identity = 78/204 (38.24%), Postives = 120/204 (58.82%), Query Frame = 0
Query:   43 MCTRSSCAVYTSVEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTNAQALRDLAIECEQKSFEISLSSRDALTTSITAHDMVSVAADAEKEAEMAEVKLGEEESKASKXXXXXXXXEKLKKDIKRLTQQRKEAAINAGSAAK 246
            MC RS CA+YT+VE+AIPSE++PF C LTP AG CTTF  ++DTV +A NA  D+  ++     +  ++  + + I  D+ AV+D L+ ++  R  ++NEE  ++  + Q + + A E  +++ E+S  +       + A +    A  A+ EA+ AE KL E +     XXXXXXXX +LK   ++ T+ RKE    AG AAK
Sbjct:   79 MCKRSKCAMYTAVENAIPSESIPFRCHLTPDAGRCTTFDHVLDTVESAENAAVDSIHASEAATTYTAQSLEMAVMIQADVAAVSDTLKAIEPFRDGLSNEEIADIEQDTQIVVESAAEAAREASEVSKDAAKVFKNRLLAAEFKKEARQADMEAKHAEQKLKENKXXXXXXXXXXXXXNELKAASEKHTKNRKEWCSKAGEAAK 282          
BLAST of Gcaud8907.t1 vs. uniprot
Match: A0A2V3IHC7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC7_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 2.290e-18
Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   43 MCTRSSCAVYTSVEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLSNNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEE 143
            MC RS CA++T++E+AIPSE +PFGC LTP AG CTTF  +MDT+ AA NA  +A  SN+   ++  EA  +V+    DI  V+ AL+ ++  R  +++EE
Sbjct:   80 MCERSKCAMFTAMENAIPSEDIPFGCHLTPDAGQCTTFAHIMDTLEAADNALVEASHSNDLASSYTSEAYHMVIKAQADISTVDAALKSIEPFRDELSDEE 180          
The following BLAST results are available for this feature:
BLAST of Gcaud8907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IVU2_9FLOR4.790e-3063.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN05_9FLOR3.800e-2831.97Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IKT6_9FLOR4.190e-2861.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISV1_9FLOR1.020e-2538.75Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IH85_9FLOR1.750e-2538.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHC7_9FLOR2.290e-1846.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_732_length_18995_cov_4.455459contigNODE_732_length_18995_cov_4.455459:9842..11250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8907.t1Gcaud8907.t1Gracilaria caudata M_176_S67 malemRNANODE_732_length_18995_cov_4.455459 9842..11250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8907.t1 ID=Gcaud8907.t1|Name=Gcaud8907.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=293bp
MHNSEVNGTSKMCSNSNNGFPINHARARNQIHLELVYGTKEMMCTRSSCA
VYTSVEDAIPSETVPFGCRLTPGAGSCTTFLSMMDTVAAAFNARDDARLS
NNELVAHAFEAQGVVMDIHNDIVAVNDALEELDGIRAHMTNEEETEVYTN
AQALRDLAIECEQKSFEISLSSRDALTTSITAHDMVSVAADAEKEAEMAE
VKLGEEESKASKENRECSECEKLKKDIKRLTQQRKEAAINAGSAAKGCNS
KRSEGRSLLQDIHERRMKCRDAREKVLATIAQVRKRSQKLNE*
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