Gcaud8846.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8846.t2
Unique NameGcaud8846.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length225
Homology
BLAST of Gcaud8846.t2 vs. uniprot
Match: A0A2V3J3C5_9FLOR (Protein Mpv17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C5_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 2.260e-42
Identity = 86/198 (43.43%), Postives = 128/198 (64.65%), Query Frame = 0
Query:   25 LLLDSPGGESEQQ---------NESKFNLAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSKIDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLSLFAH 213
            +L+D PG +             N S FN  +AY+++L   PL+TK++TS VL +ISDLIAQ +E    I V R +A  +   + +AP+ HV YE++E  +PA N+RNLL Q++ D ++A P+WL +F   +SI+EG   +  +  TL+T+ +P L +T ++ P VQ VNF++VP   RVLV+N+ DLVYTT+LSL AH
Sbjct:   11 ILVDKPGLDRSSSCSTFATLNDNGSCFNPQRAYVRMLDKYPLVTKMLTSGVLVAISDLIAQLVEARGYIWVQRTIAFSVAEIVFSAPLLHVLYELYERYIPAVNLRNLLSQLVLDGVVAMPVWLFVFLVLVSILEGRWTLVEIWETLRTKYIPSLIVTLILTPVVQSVNFTVVPPKYRVLVVNIVDLVYTTILSLLAH 208          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI001CF38B90 (peroxisomal membrane protein 2 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF38B90)

HSP 1 Score: 89.0 bits (219), Expect = 2.430e-18
Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIER-----NSKIDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L + Y++LLH+RP+LTK VTSA+LS++ +L++Q IER     +  +D+V  L     G   T P+ H  Y   EH +P++     L ++L D +I  P +L+LFF  ++ +EG +++  +  TL       LK+ W V+   Q +N + VP   RVL  N+    + T L+
Sbjct:   20 LLRTYLQLLHSRPILTKAVTSAILSALGNLLSQRIERRHQSKSKNVDLVAPLRFAAYGLFFTGPLSHYFYMFLEHWIPSSVPLAGLRRLLLDRIIIAPGFLLLFFIVMNFLEG-KNLKSLNRTLNDSYWSALKMNWKVWTPFQFINVNYVPVQFRVLFANLVAFFWYTYLA 189          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI000F4DE841 (peroxisomal membrane protein 2 n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4DE841)

HSP 1 Score: 87.8 bits (216), Expect = 6.830e-18
Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK---------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L Q Y+ LL   P++TK VTSA+LSS+ +L++QA+E   K         +D+   +   + G ++T P+ H  Y++ E + PA+   + L ++L + L+  P +L LFF  ++I+EG+ +  +    L+ +  P LK+ W V+   Q +N + VP   RVL  N+  L +   L+
Sbjct:   17 LLQQYLHLLKKYPIITKSVTSAILSSMGNLLSQALESKKKLKEGQSRKEVDIYGPIRFAVYGLVITGPLSHFFYQLLELLFPASAPYSTLKRLLLERLVFAPAFLFLFFAVMNILEGKTNADLQ-DKLKARYWPALKMNWKVWTPFQFININYVPVQFRVLFANLIALFWNAYLT 190          
BLAST of Gcaud8846.t2 vs. uniprot
Match: A0A6P8S7J2_GEOSA (peroxisomal membrane protein 2 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8S7J2_GEOSA)

HSP 1 Score: 86.7 bits (213), Expect = 1.640e-17
Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIER---NSK-IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L + Y+ LL   P+LTK VTS +LS++ +L+AQAIER   +SK  DV   L   + G L T P+ H  Y   EH++P T    ++ ++L D L+  P +L+LFF  ++ +EG +D+  +   ++T     LK+ W V+  VQ +N + VP   RVL  N+  L +   LS
Sbjct:   16 LLRQYLLLLKVHPVLTKSVTSGILSALGNLLAQAIERKRDSSKGADVNAPLRYAIYGFLFTGPLSHFFYLYMEHLVPPTASFAVIQKLLLDRLVFAPAFLLLFFCVMNFLEG-KDLSALSERMKTGYWRALKMNWKVWTPVQFINVNYVPVQFRVLFGNLVALFWYAYLS 184          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI001CFB2AA8 (peroxisomal membrane protein 2 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB2AA8)

HSP 1 Score: 85.1 bits (209), Expect = 6.870e-17
Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 0
Query:   33 ESEQQNESKFN--LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK---------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            ES+   +  F+  L   Y+ LL   P+LTK +TS+VLS++ +++AQ +E   K         +      A+F  G L T P+ H  Y   E ++PAT   + + ++L D L+  P +L+LFF  ++I+EG ++V+V LH +++     LK+ W V+  +Q +N + VP   RVL  N+  L +   L+
Sbjct:    4 ESKPLRDQAFSQRLLIQYLMLLKAYPILTKSITSSVLSALGNILAQLLENRKKDPNSSTVFRLSGPARFAVF--GLLFTGPVSHYFYLYLEQLVPATVPFSFVKKLLVDRLLFAPAFLLLFFLIMNILEG-KNVNVFLHKMKSSYWSALKMNWKVWTPLQFINLNYVPIQFRVLFANLVSLFWYAYLA 188          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI00198FF169 (peroxisomal membrane protein 2 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00198FF169)

HSP 1 Score: 84.3 bits (207), Expect = 1.400e-16
Identity = 58/175 (33.14%), Postives = 96/175 (54.86%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK---------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L Q Y+ LL   P++TK VTSAVLS++ +L++QA+E   K         +DV   +   + G + T P+ H  Y++ E M PA+   + L ++L + LI  P +L+LFF  ++ +EG+ +  +    L+ +  P LK+ W V+   Q +N + VP   RVL  N+  L +   L+
Sbjct:   17 LLQQYLHLLKKYPVITKSVTSAVLSALGNLLSQALEAKKKLKEGQSGKEVDVNGPVRFAVYGLVFTGPLSHYFYQLLELMFPASAPFSTLKRLLLERLIFAPAFLLLFFVVMNSLEGKTNADLQAK-LKARYWPALKMNWKVWTPFQFININYVPVQFRVLFANLIALFWNAYLT 190          
BLAST of Gcaud8846.t2 vs. uniprot
Match: A0A6J2WMW5_CHACN (peroxisomal membrane protein 2 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WMW5_CHACN)

HSP 1 Score: 84.0 bits (206), Expect = 1.960e-16
Identity = 55/175 (31.43%), Postives = 95/175 (54.29%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK---------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L Q Y+ LL   P+LTK VTS +LS++ +L++QA+E   K         +D +      + G L+T P+ H  Y+V E ++PAT    ++ ++L D L+  P +L+LFF  ++++EG+       + ++    P LK+ W V+   Q +N + +P   RVL  N+  L +   L+
Sbjct:   17 LLQQYLLLLKKYPILTKAVTSGILSALGNLLSQALESRKKAKQGSPAKDVDFIGPARFAVYGLLVTGPVSHYFYQVLEVLLPATVPYCMVKRLLLDRLVFAPAFLLLFFSVMNVLEGKTLADFE-NKVKKGYWPALKMNWKVWTPFQFININFIPVQFRVLFANLVALFWYAYLA 190          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI0014777B44 (peroxisomal membrane protein 2 n=1 Tax=Esox lucius TaxID=8010 RepID=UPI0014777B44)

HSP 1 Score: 84.0 bits (206), Expect = 1.960e-16
Identity = 60/175 (34.29%), Postives = 94/175 (53.71%), Query Frame = 0
Query:   44 LAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK---------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            L Q Y+ LL N P+LTK VTSA+LS++ +L++QA+E   K         ID+       + G L+T P+ H  Y++ E  +PAT    ++ ++L D LI  P +L++FF  ++I+EG+R        ++    P LK+ W V+   Q  N   VP   RVL  N+  L +   L+
Sbjct:   17 LLQQYLVLLKNYPILTKSVTSAILSALGNLLSQALEAKRKAKEGAAVKEIDISGPARFAIYGLLITGPVSHYFYQLMEVFIPATVPFCVVKRLLLDRLIFAPAFLLVFFFVMNILEGKRWTDFR-SKIKCNYWPALKMNWKVWTPFQFFNIIYVPVQFRVLFANIVALFWYAYLA 190          
BLAST of Gcaud8846.t2 vs. uniprot
Match: A0A6P6K9D4_CARAU (peroxisomal membrane protein 2-like n=4 Tax=Cyprinidae TaxID=7953 RepID=A0A6P6K9D4_CARAU)

HSP 1 Score: 83.6 bits (205), Expect = 2.740e-16
Identity = 59/173 (34.10%), Postives = 95/173 (54.91%), Query Frame = 0
Query:   46 QAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIE------RNS---KIDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            Q Y+ LL   P+LTK VTS +LSS+ +L++QA+E       NS   KI V+  L   + G  +T P+ H  Y + E + P T    L+ ++L + LI  P +L+LF+  ++ +EG+    V  + L+T   P +K+ W V+  +Q +N + VP   RVL  N+  L +   L+
Sbjct:   19 QQYLSLLKKYPILTKSVTSGILSSLGNLLSQALEYRKSNKENSPKKKISVLGPLHFAVFGLFITGPVSHYFYHLLEVLFPNTVPYCLIKRLLLERLIFAPAFLLLFYVVMNALEGKTLADVQ-NKLKTSFWPAMKMNWKVWTPIQFININYVPVQFRVLFANLVALFWYAYLA 190          
BLAST of Gcaud8846.t2 vs. uniprot
Match: UPI001F07D28D (peroxisomal membrane protein 2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07D28D)

HSP 1 Score: 82.8 bits (203), Expect = 5.020e-16
Identity = 55/180 (30.56%), Postives = 98/180 (54.44%), Query Frame = 0
Query:   36 QQNESKFNLAQAYMKLLHNRPLLTKVVTSAVLSSISDLIAQAIERNSK------IDVVRNLALFLTGALLTAPIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVEGERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVCDLVYTTLLS 209
            +Q+     L Q Y+ LL N P+LTK VTS +LS++ ++++Q +E   K      ID+       + G  +T P+ HV Y++ E +MPA+    ++ ++L D L+  P +L+LF+  ++I+EG + +      ++T     LK+ W V+   Q +N + +P   RVL  N+  L +   L+
Sbjct:    9 RQSSFHVRLLQQYLGLLKNYPILTKSVTSGILSALGNILSQTLEARKKTKDLKKIDITGPTRYAIYGLFVTGPVSHVFYQLMEVLMPASEPYCVVKRLLLDRLVFAPAFLMLFYFVMNILEG-KSLSDFEGKVRTSYWTALKMNWKVWTPFQFININYIPVQFRVLFANMVALFWYAYLA 187          
The following BLAST results are available for this feature:
BLAST of Gcaud8846.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3C5_9FLOR2.260e-4243.43Protein Mpv17 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
UPI001CF38B902.430e-1834.50peroxisomal membrane protein 2 n=2 Tax=Bufo TaxID=... [more]
UPI000F4DE8416.830e-1832.00peroxisomal membrane protein 2 n=1 Tax=Tachysurus ... [more]
A0A6P8S7J2_GEOSA1.640e-1737.06peroxisomal membrane protein 2 n=1 Tax=Geotrypetes... [more]
UPI001CFB2AA86.870e-1732.45peroxisomal membrane protein 2 n=1 Tax=Protopterus... [more]
UPI00198FF1691.400e-1633.14peroxisomal membrane protein 2 n=1 Tax=Silurus mer... [more]
A0A6J2WMW5_CHACN1.960e-1631.43peroxisomal membrane protein 2 n=1 Tax=Chanos chan... [more]
UPI0014777B441.960e-1634.29peroxisomal membrane protein 2 n=1 Tax=Esox lucius... [more]
A0A6P6K9D4_CARAU2.740e-1634.10peroxisomal membrane protein 2-like n=4 Tax=Cyprin... [more]
UPI001F07D28D5.020e-1630.56peroxisomal membrane protein 2 n=1 Tax=Hypomesus t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 148..209
e-value: 2.8E-16
score: 59.4
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 40..213
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 40..213
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..111
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1942_length_7523_cov_3.618811contigNODE_1942_length_7523_cov_3.618811:3148..3822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8846.t2Gcaud8846.t2Gracilaria caudata M_176_S67 malemRNANODE_1942_length_7523_cov_3.618811 3148..3822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8846.t2 ID=Gcaud8846.t2|Name=Gcaud8846.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=225bp
MSQPPFAKRSRMELDHALAHEHTALLLDSPGGESEQQNESKFNLAQAYMK
LLHNRPLLTKVVTSAVLSSISDLIAQAIERNSKIDVVRNLALFLTGALLT
APIFHVAYEVFEHMMPATNMRNLLLQVLADALIAQPIWLILFFPFISIVE
GERDVHVMLHTLQTQLVPVLKLTWLVFPAVQLVNFSLVPKHLRVLVLNVC
DLVYTTLLSLFAHGNAHSNHAAQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22