Gcaud8832.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8832.t1
Unique NameGcaud8832.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length142
Homology
BLAST of Gcaud8832.t1 vs. uniprot
Match: R7QST3_CHOCR (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QST3_CHOCR)

HSP 1 Score: 159 bits (403), Expect = 8.510e-48
Identity = 76/140 (54.29%), Postives = 105/140 (75.00%), Query Frame = 0
Query:    1 MASGIAISQKCVDAFSALSKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKFAVQKTIQATEPEEVGYAVLKTQIAK 140
            MASGIAI+ KCV+A+ ALSKREY  ++LKIN DM+ V +D  + P +G+ ETEWK+ V  LPEN  RY+++DF+WKETPTVTKSK++MI W+ E  P+R + + AA+ E+V +K AVQK+IQA E E++ Y  +K  + K
Sbjct:    1 MASGIAIADKCVEAYKALSKREYGSIILKINDDMSEVGVDKCMPPSAGDLETEWKNLVSGLPENGCRYIISDFSWKETPTVTKSKIIMILWSAEYAPVRHRTVYAASKESVATKMAVQKSIQAVELEDIAYLAIKRDVTK 140          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A1X6P6I6_PORUM (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 148 bits (374), Expect = 2.310e-43
Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 0
Query:    1 MASGIAISQKCVDAFSALSK-REYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKFA-VQKTIQATEPEEVGYAVLKTQIAK 140
            MASGIA++ KC+  + ALS+ R +  V+LKIN DM+ V +DS +    G+ E +WKDFVK LPE+D RYV+ DF WK+ PTVTKSK+ +I W+PE + +R+KMI AA+ EAV SK A VQ+ +QATE EE+ Y V+K Q+AK
Sbjct:    1 MASGIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A2V3J6Q4_9FLOR (Actin-depolymerizing factor 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q4_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 8.820e-43
Identity = 71/140 (50.71%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    1 MASGIAISQKCVDAFSALSKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKFAVQKTIQATEPEEVGYAVLKTQIAK 140
            MASGIA+S KC+DA++AL K EY+ V+LKI      +EL+ST    + EPE +WKDFVK+LPE+ ARY+++DF  KETPTV+K+K++++ W P+  PIR+K++ AA++EA+T+K   QK IQAT+ +++ Y+V+K  + K
Sbjct:    1 MASGIAVSDKCIDAYTALRKSEYSRVILKITDAADLIELESTHLRSAKEPEEDWKDFVKSLPEDSARYIISDFTVKETPTVSKAKILVLLWNPDGAPIRSKLLYAASVEALTAKVQPQKYIQATDTDDIEYSVVKNALFK 140          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A5J4Z6P4_PORPP (Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6P4_PORPP)

HSP 1 Score: 91.3 bits (225), Expect = 8.640e-21
Identity = 52/142 (36.62%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    1 MASGIAISQKCVDAFSALSK-REYACVVLKINKDMTAVELDSTVAPVSG--EPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKFA-VQKTIQATEPEEVGYAVLKTQI 138
            MAS I + +K    F  L    +Y  V+ KI  D T+VE++ST+  +    +P   +K+ V  LPE+  RY+L DF W+ + T+T SKV++I W+ ET+ +R KMI A++ E + +    +Q+ +QAT+ +E+ Y V+  +I
Sbjct:    1 MASNINVPEKLKAEFDGLVHGHKYRAVIAKITPDFTSVEVESTLPALQDMVDPGPAYKEMVDMLPEHGCRYILYDFQWQSSATITHSKVILILWSSETSKVREKMIYASSQECILNAVPDIQRQVQATDEDEISYPVVLKRI 142          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A060SZ67_BLAAD (Cofilin n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SZ67_BLAAD)

HSP 1 Score: 77.4 bits (189), Expect = 2.150e-15
Identity = 45/142 (31.69%), Postives = 82/142 (57.75%), Query Frame = 0
Query:    3 SGIAISQKCVDAFSALS-KREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTK-SKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLKTQIAKS 141
            SG+  + +CV AF+ L  K++Y  ++ K++ D   + LD T +      + ++  FV+ LPEND RY + D  ++      K SK++  +W+P+T P+R+KM+ A++ EA+      VQ  +Q T+  EV Y  +  +++K+
Sbjct:    5 SGVKPNDECVQAFNDLKLKKKYKSIIFKLSDDKKEIVLDGTSS------DADYDQFVEKLPENDCRYAVYDLEYEIGAGEGKRSKIIFFSWSPDTAPVRSKMVYASSKEAIRRALNGVQAEVQGTDFSEVAYEAILEKVSKA 140          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A5J5BMH2_9ASTE (ADF-H domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BMH2_9ASTE)

HSP 1 Score: 77.0 bits (188), Expect = 2.690e-15
Identity = 45/138 (32.61%), Postives = 79/138 (57.25%), Query Frame = 0
Query:    2 ASGIAISQKCVDAFSAL-SKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLKTQ 137
            ASG+A+   C   F  L +KR Y  +V KI ++   V ++       GEP   ++DF  +LP ++ RY + DF +       KS++  I W+P+T+P+R+KMI A++ +    +   +Q  +QAT+P E+G  V++++
Sbjct:    5 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEEQKQVVVEKV-----GEPAQSYEDFTASLPADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSPVRSKMIYASSKDRFKMELDGIQVELQATDPTEMGLDVIRSR 137          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A1Y3N6R8_PIRSE (Cofilin n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3N6R8_PIRSE)

HSP 1 Score: 76.6 bits (187), Expect = 3.700e-15
Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = 0
Query:    2 ASGIAISQKCVDAFSALSK-REYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLKTQIAK 140
            ASG+ +  +C++AF  L   R+   ++ KI+ ++  V ++ T     GE ET++ DF+ +LPEN+ RY + DF +       ++K+V  TW+P+T  I+ KM+ AAT EA+  K   +   IQ T+  E  Y  +  ++ +
Sbjct:    3 ASGVGVKDECINAFQDLKLGRKLKYIIYKISDNLKEVVVEKT-----GE-ETDYDDFIGSLPENECRYAVYDFNYTNEEGGKRTKIVFYTWSPDTARIKMKMVYAATKEAIKKKLDGIYVEIQCTDLAEASYETVLEKVTR 137          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A7J7CL81_TRIWF (Actin-depolymerizing factor 1-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CL81_TRIWF)

HSP 1 Score: 76.6 bits (187), Expect = 3.790e-15
Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = 0
Query:    3 SGIAISQKCVDAFSAL-SKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLK 135
            SG+AIS +C   F  L +KR Y  +V KI++    V+++       GEP   ++DF   LP N+ RY + DF +       KSK+  ++W+P+T+ +R+KM+ A++ +    +   VQ  +QAT+P E+   ++K
Sbjct:    6 SGMAISDECKLRFLELKAKRVYRFIVFKIDEKAQQVKVEKV-----GEPSESYEDFTACLPANECRYAVYDFDFTTNENCQKSKIFFVSWSPDTSRVRSKMVYASSKDRFRRELDGVQVELQATDPSEISLDIVK 135          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A6A3A1E1_HIBSY (Actin-depolymerizing factor 7 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A1E1_HIBSY)

HSP 1 Score: 76.6 bits (187), Expect = 4.170e-15
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = 0
Query:    2 ASGIAISQKCVDAFSAL-SKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLK 135
            ASGIA++  C   F  L +KR Y  +V KI +D T       V    GEP+ +++D + +LP N+ RY + D  +       KSK+V I W+P+++ +R KM+ A++ +    +   VQ  +QAT+P E+ Y ++K
Sbjct:    7 ASGIAVNDNCNQKFLELKAKRNYRYIVFKI-EDAT----QQVVVEKLGEPDHKYEDLIASLPANECRYAVFDLDFTTDENCQKSKIVFIAWSPDSSRVRNKMVYASSKDRFRKELDGVQVELQATDPSEMSYGIVK 137          
BLAST of Gcaud8832.t1 vs. uniprot
Match: A0A6J1D1Y2_MOMCH (actin-depolymerizing factor 6-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D1Y2_MOMCH)

HSP 1 Score: 75.9 bits (185), Expect = 7.540e-15
Identity = 46/136 (33.82%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    2 ASGIAISQKCVDAFSAL-SKREYACVVLKINKDMTAVELDSTVAPVSGEPETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRAKMISAATLEAVTSKF-AVQKTIQATEPEEVGYAVLK 135
            ASG+A+  +C   F  L +KR+Y  +V KI +++  V +D     V G  ET + DF+ ++P N+ RY + DF +       KSK+  I+W+P+T+ IR+KM+ A++ +    +   +Q  +QAT+P E+ + ++K
Sbjct:    5 ASGMAVHDECKLKFLDLKAKRKYRFIVFKIEENIQQVTVDK----VGGHNET-YDDFIASIPANECRYAVFDFDFTTDENCQKSKIFFISWSPDTSKIRSKMLYASSKDRFKRELDGIQVELQATDPSEMSFDIIK 135          
The following BLAST results are available for this feature:
BLAST of Gcaud8832.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QST3_CHOCR8.510e-4854.29ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A1X6P6I6_PORUM2.310e-4354.93ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3J6Q4_9FLOR8.820e-4350.71Actin-depolymerizing factor 8 n=1 Tax=Gracilariops... [more]
A0A5J4Z6P4_PORPP8.640e-2136.62Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688... [more]
A0A060SZ67_BLAAD2.150e-1531.69Cofilin n=1 Tax=Blastobotrys adeninivorans TaxID=4... [more]
A0A5J5BMH2_9ASTE2.690e-1532.61ADF-H domain-containing protein n=1 Tax=Nyssa sine... [more]
A0A1Y3N6R8_PIRSE3.700e-1532.62Cofilin n=3 Tax=Neocallimastigaceae TaxID=29007 Re... [more]
A0A7J7CL81_TRIWF3.790e-1533.33Actin-depolymerizing factor 1-like n=1 Tax=Tripter... [more]
A0A6A3A1E1_HIBSY4.170e-1534.56Actin-depolymerizing factor 7 n=2 Tax=Hibiscus syr... [more]
A0A6J1D1Y2_MOMCH7.540e-1533.82actin-depolymerizing factor 6-like n=1 Tax=Momordi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 9..139
e-value: 1.4E-22
score: 91.0
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 11..135
e-value: 4.2E-25
score: 87.9
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 4..139
score: 24.905796
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..141
e-value: 1.4E-34
score: 121.1
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 2..139
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 3..135
e-value: 1.80726E-34
score: 114.961
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOG-RELATEDcoord: 2..139
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_255_length_33857_cov_3.958716contigNODE_255_length_33857_cov_3.958716:18592..19096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8832.t1Gcaud8832.t1Gracilaria caudata M_176_S67 malemRNANODE_255_length_33857_cov_3.958716 18592..19096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8832.t1 ID=Gcaud8832.t1|Name=Gcaud8832.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=142bp
MASGIAISQKCVDAFSALSKREYACVVLKINKDMTAVELDSTVAPVSGEP
ETEWKDFVKTLPENDARYVLADFAWKETPTVTKSKVVMITWTPETTPIRA
KMISAATLEAVTSKFAVQKTIQATEPEEVGYAVLKTQIAKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR017904ADF/Cofilin