Gcaud8775.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8775.t1
Unique NameGcaud8775.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length419
Homology
BLAST of Gcaud8775.t1 vs. uniprot
Match: A0A2V3IGN1_9FLOR (Gamma-taxilin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN1_9FLOR)

HSP 1 Score: 382 bits (980), Expect = 6.350e-127
Identity = 275/419 (65.63%), Postives = 316/419 (75.42%), Query Frame = 0
Query:    1 MPRRARRPNAADANSSRAPANEHAISARIQATFKKIIVALQDQRDLRCDLASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQQRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLRDLRERYDMREQHFKQQVHRKHLEQQLAIAKHRELVQKHSTTTDQLCDLQTHLQTLQTQHHYQQSMLAQYQHTIXXXXXYLNSSEQLFLSQKHQIEQMQAEAKQLQSANASARNANNATNVHIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVTKERSELHSEKLVMQDAWSNLKEEIELLKDQVGESSRMCEALQTILSREP-HVAGSAIFTNHNALVVDDANSDELSRVRLVSGSKLDEQMPLATTTPKSAPPNGIRPPG 418
            MPRRARRP A+D NS R P++EHAISARIQATFKKIIVALQ+QRDLRCDLASTR RALVLDSEFVVLHTEFDR  AAR+KLDALSREL RRNK ID+EA+Q ++ EK+ITED+VQRFN AM++IN KLT+++ SR++R+ YV  L+NK+  L+ERYDMREQHF QQV RK LEQQL +AKHRELV  HS TT QL  +   LQT + QHH  ++ +   + T XXXXX                           SANA +RNANN+TNVH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVT ERSELH E LVMQDAWSNLK+EIE LKDQVGES R+ E LQ I++RE    AGS+IF    +  ++D  SD LS VRLVSGS+LDEQ+PLA T     P NGI PPG
Sbjct:    1 MPRRARRPTASDPNSVRGPSSEHAISARIQATFKKIIVALQEQRDLRCDLASTRTRALVLDSEFVVLHTEFDRSAAARNKLDALSRELARRNKSIDEEAEQSIVAEKKITEDVVQRFNAAMAEINNKLTSKNHSRERRNLYVQTLQNKISVLQERYDMREQHFNQQVKRKQLEQQLLVAKHRELVNTHSATTKQLAQIHQQLQTAKQQHHQLKNDVQHSRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANAISRNANNSTNVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVTIERSELHREILVMQDAWSNLKQEIETLKDQVGESGRVFEVLQNIMNRESLDGAGSSIFRGDRS--IEDVISDALSPVRLVSGSQLDEQIPLAATASNPGPSNGILPPG 417          
BLAST of Gcaud8775.t1 vs. uniprot
Match: A0A7S0BNG1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNG1_9RHOD)

HSP 1 Score: 95.1 bits (235), Expect = 9.990e-18
Identity = 100/356 (28.09%), Postives = 178/356 (50.00%), Query Frame = 0
Query:   35 KIIVALQDQRDLRCDLASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQQRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLRDLRERYDMREQHFKQQVHRKHLEQQLAIAKHRELVQKHSTTTDQLCDLQTHLQTL-QTQHHYQQSM---LAQYQHTIXXXXXYLNSSEQLFLSQKHQIEQMQAEAKQLQSANASARNANNATNVHIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVTKERSELHSEKLVMQDAWSNLKEEIELLKDQVGESSRMCEALQTILSREPHVAGSAIFTNHNALVVDDANSDELSR 386
            K++  + + R L  ++ + R      + +   +  E +R  +A+ KL+ALSREL R+N+ + ++  +++ ++  + E ++ +    M++  R    Q ++ ++    V  L+ +L+DL  RYD+RE+HF  Q+  K LE +LA A+ RE       +T++L     HL+ L +TQ   + ++   L +Y +        L+ + Q+F +   ++E+M    KQLQ ANAS R  N   N    A                   XXXXXXXXXXXX    +T ER+ L +E   +  AW  LK +I+ L+D+  ++  + E +Q ++     + G    T  +   VD   ++ +SR
Sbjct:   71 KLLQGVNEMRTLAYEIGNERRLRRSAEHDADSMKVELNRAKSAKSKLEALSRELSRQNRELSEQTGKKIAEDGALKEKLLGQLRETMTETERNAELQVKADERHAEEVRLLKEQLKDLDTRYDVREEHFGLQLRTKDLELELAEARARE----QGASTEELKAKVAHLEALTKTQGKTETNLRKQLTEYGNKFDSFQETLDQNNQVFSAYTVEMEKMSKTVKQLQKANASLREENTNLNKKSNAAMYQLVSIKADLEDAVKAEXXXXXXXXXXXXLCRSLTSERASLQNESDALHRAWHALKNKIDALRDEDFQTDHLWELIQGLV-----LEGEKEATGKSRAKVDTKTTESVSR 417          
BLAST of Gcaud8775.t1 vs. uniprot
Match: A0A388JSS2_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JSS2_CHABU)

HSP 1 Score: 68.9 bits (167), Expect = 7.300e-9
Identity = 51/170 (30.00%), Postives = 93/170 (54.71%), Query Frame = 0
Query:   22 EHAISARIQATFKKIIVALQDQRDLRCDLASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQQRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLRDLRERYDMREQHFKQQVHRKHLEQQLAIAKHRELVQKHSTT 191
            E +   +++    K +  + + + L  ++A  R +  +L  E   L  E  +  A + KL++L REL R+NKL+ +++++   +E++  E++  RF   + +I  KL  Q   R ++ R   ALR KL    ++Y++RE+HF+ Q+  K LE QL    H +L Q++ TT
Sbjct:  251 ESSAEEKLKVLRAKYVEQVNETKQLDREMALLRRKCDLLRKEKDTLSAEATKGQAVKQKLESLCRELQRQNKLVMEDSRRVATEEQQRREELAGRFQSTIQEITVKLEEQGEERIRQIRENEALREKLTQFTQKYEIREEHFQHQLKTKALELQLL---HAKLTQQNETT 417          
BLAST of Gcaud8775.t1 vs. uniprot
Match: R7UXZ0_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UXZ0_CAPTE)

HSP 1 Score: 65.5 bits (158), Expect = 3.510e-8
Identity = 63/240 (26.25%), Postives = 115/240 (47.92%), Query Frame = 0
Query:   28 RIQATFKKIIVALQDQRDLRCDLASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQQRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLRDLRERYDMREQHFKQQVHRKHLEQQL------------AIAKHRELVQKHSTTTDQLCDLQTHLQTLQTQHHYQQSMLAQYQHTIXXXXXYLNSSEQLFLSQKHQIEQMQAEAKQLQ 255
            ++ A  KK    L++ R ++        +  V+  E   L +E  + V A+ KL++L REL R NKL+ +E+  R  +E+   +++  +F   ++DI  ++    +   +       L NKL++L E+Y++REQH ++    K LEQQL              AK   L +K    T+   D    ++ L+ Q    ++ +A Y          L+ S ++F S K ++E+M  + K+L+
Sbjct:   14 KLAALCKKYTELLEEHRVMQTAAKQHSRKLSVVCREKEQLQSEHSKAVLAKSKLESLCRELQRHNKLVKEESLARAREEEEKRKEVTTKFQTTINDIQGQMKEHYQKNTKLREENIELANKLKNLIEQYELREQHIEKMFKHKDLEQQLIDAKLAQASLQITEAKESSLQEKQMLLTE-ATDAHKRVRVLEEQEVALRAQVAMYTEKYEEFQGTLSKSNEVFGSFKSEMEKMTKKIKKLE 252          
BLAST of Gcaud8775.t1 vs. uniprot
Match: UPI0006D91837 (beta-taxilin-like isoform X1 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D91837)

HSP 1 Score: 59.7 bits (143), Expect = 6.310e-6
Identity = 60/243 (24.69%), Postives = 114/243 (46.91%), Query Frame = 0
Query:   28 RIQATFKKIIVALQDQRDLRCDLASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQQRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLRDLRERYDMREQHFKQQVHRKHLEQQLAIAK-------HRELVQKHSTTTD----QLCDLQTHLQTLQTQHHYQQSMLAQYQHTIXXXXXYLNSSEQLFLSQKHQIEQMQAEAKQLQSANA 259
            +++A  KK    L++ R  +  L   +    +L  E   L +E  R + AR KL++L REL R NK + +E  QR  +E    +++   F   ++DI  ++  QS    +  +  + L  KL+++ ++Y++RE+ F +    + L+Q+L  AK        +E  ++H    +    Q  +     Q ++ Q    +  LA Y          L  S ++F S K ++++M  + K+L+   A
Sbjct:  199 KMEALIKKYAELLEEHRADQKQLKLLQKSQALLSKEKDQLQSEHSRAILARSKLESLCRELQRHNKTLKEETLQRAREEDEKRKEVTVHFQTTLADIQAQIEQQSERNVKLCQENSELGEKLKNIIDQYEVREEQFDKVFKHRELQQKLVDAKLEQAQELMKEAEERHQREKEYLLKQAIECTKKCQGMKEQELQLKKQLALYSGKFEEFQGTLAKSNEVFASFKEEMDKMTKKMKKLEKETA 441          
The following BLAST results are available for this feature:
BLAST of Gcaud8775.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IGN1_9FLOR6.350e-12765.63Gamma-taxilin n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A7S0BNG1_9RHOD9.990e-1828.09Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A388JSS2_CHABU7.300e-930.00Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
R7UXZ0_CAPTE3.510e-826.25Uncharacterized protein (Fragment) n=1 Tax=Capitel... [more]
UPI0006D918376.310e-624.69beta-taxilin-like isoform X1 n=2 Tax=Latimeria cha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..320
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableCOILSCoilCoilcoord: 237..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR16127:SF13GH01188Pcoord: 67..332
IPR026183Taxilin familyPFAMPF09728Taxilincoord: 27..313
e-value: 2.0E-36
score: 125.7
IPR026183Taxilin familyPANTHERPTHR16127TAXILINcoord: 67..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_40_length_68803_cov_4.393963contigNODE_40_length_68803_cov_4.393963:67372..68628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8775.t1Gcaud8775.t1Gracilaria caudata M_176_S67 malemRNANODE_40_length_68803_cov_4.393963 67372..68628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8775.t1 ID=Gcaud8775.t1|Name=Gcaud8775.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=419bp
MPRRARRPNAADANSSRAPANEHAISARIQATFKKIIVALQDQRDLRCDL
ASTRARALVLDSEFVVLHTEFDRCVAARDKLDALSRELMRRNKLIDDEAQ
QRVLDEKRITEDIVQRFNHAMSDINRKLTTQSRSRQQRDRYVAALRNKLR
DLRERYDMREQHFKQQVHRKHLEQQLAIAKHRELVQKHSTTTDQLCDLQT
HLQTLQTQHHYQQSMLAQYQHTIQQAHHYLNSSEQLFLSQKHQIEQMQAE
AKQLQSANASARNANNATNVHIKAMQSECKRLEASITQKRDVERKERIKI
EALEKLCKQVTKERSELHSEKLVMQDAWSNLKEEIELLKDQVGESSRMCE
ALQTILSREPHVAGSAIFTNHNALVVDDANSDELSRVRLVSGSKLDEQMP
LATTTPKSAPPNGIRPPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026183Taxilin_fam