Gcaud8772.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8772.t1
Unique NameGcaud8772.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length337
Homology
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A2V3IZH5_9FLOR (Protein SUPPRESSOR OF FRI 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH5_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 4.280e-43
Identity = 85/154 (55.19%), Postives = 110/154 (71.43%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLPKRRRDNHLSPVALPHAAPTTAYVDG-RANYITSSAPAAP-PYGSAHLYSY 152
            MGRKKKR+AP+A DRIFCYYCDRTF  EQELLSHQ++KH RC  C+KRM+SVQSM+VHA+QMHN R+  VPN+VPGR+S+ ++VLGM GIP+S+YA+ D     + R+  + +PV  P  + T  +     A + T  AP  P PY SA +  Y
Sbjct:    1 MGRKKKRSAPSAFDRIFCYYCDRTFHLEQELLSHQRDKHLRCSVCSKRMISVQSMVVHAEQMHNTRIQTVPNAVPGRDSITIEVLGMKGIPDSYYAALDSDRTKRPRQ--YPAPVEPPLYSATPPFAPSPHAIHPTQHAPHLPAPYSSAPVSPY 152          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A438E4P3_VITVI (Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4P3_VITVI)

HSP 1 Score: 102 bits (253), Expect = 3.330e-23
Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYAS 97
            MG+KKKRAA     ++FCYYC+R F+ E+ L+ HQK KHF+C  CNK++ +   M +H  Q+H   V+ VPN+ PGRES  +++ GM GIP+   A+
Sbjct:    1 MGKKKKRAA-----KVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKETVSKVPNANPGRESTEIEIFGMQGIPDDILAA 92          
BLAST of Gcaud8772.t1 vs. uniprot
Match: D0MWC9_PHYIT (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MWC9_PHYIT)

HSP 1 Score: 106 bits (264), Expect = 4.780e-23
Identity = 49/111 (44.14%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    1 MGRKKKR---AAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLPKRRR 108
            MG+KK+R   A   A+ RIFCYYCDR F  E+ L+ HQK +HF+CP C+K++ ++  M++H  Q+H   +  +PN+ PG+ESV V+V GM G+P++      D ++PK+ R
Sbjct:    1 MGKKKRRDDGAGEAAQRRIFCYYCDRNFDDEKVLILHQKARHFKCPACHKKLSTISGMIIHTQQVHKETLQSIPNAKPGKESVDVEVYGMEGVPDA------DGNVPKKPR 105          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A438J3X1_VITVI (Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J3X1_VITVI)

HSP 1 Score: 102 bits (253), Expect = 9.640e-23
Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYAS 97
            MG+KKKRAA     ++FCYYC+R F+ E+ L+ HQK KHF+C  CNK++ +   M +H  Q+H   V+ VPN+ PGRES  +++ GM GIP+   A+
Sbjct:    1 MGKKKKRAA-----KVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKETVSKVPNANPGRESTEIEIFGMQGIPDDILAA 92          
BLAST of Gcaud8772.t1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA)

HSP 1 Score: 100 bits (248), Expect = 1.160e-22
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYAS 97
            MGRKKKR      D++FCYYCDR F  E+ L+ HQK KHF+C  CNK++ +   M++H  Q+H   VT VPN+  GRES  +++ GM GIP    A+
Sbjct:    1 MGRKKKRQ----NDKVFCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIPADVLAA 93          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A329STQ4_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329STQ4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.250e-22
Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    1 MGRKKKR---AAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLPKRRR 108
            MG+KK+R   A    + RIFCYYCDR F  E+ L+ HQK +HF+CP C+K++ ++  M++H  Q+H   +  +PN+ PG+ESV V+V GM G+P++      D ++PK+ R
Sbjct:    1 MGKKKRRDDGAGEATQRRIFCYYCDRNFDDEKVLILHQKARHFKCPTCHKKLSTISGMIIHTQQVHKETLKSIPNAKPGKESVEVEVYGMEGVPDA------DGNVPKKPR 105          
BLAST of Gcaud8772.t1 vs. uniprot
Match: F0WJC3_9STRA (Uncharacterized protein AlNc14C120G6650 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJC3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.370e-22
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 0
Query:   15 RIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLPKRRRDNHLS---PVALPHAAPTTAYVDGR 130
            RI+CYYCDR F  E+ L+ HQK +HF+C  C+K++ +   M+VH  Q+H + +T VPN+ PGR+S+ V+V GM G+P    AST D    K R D  +S   P+ +P   P   ++ GR
Sbjct:   26 RIYCYYCDRNFDDEKVLIQHQKARHFKCHTCHKKLSTAGGMVVHVMQVHKIPITTVPNAKPGRDSIDVEVYGMEGVPGERRASTLDMAAKKARPDIAMSVPFPMGIPRP-PMGVFIPGR 143          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A6G0W4Y8_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W4Y8_9STRA)

HSP 1 Score: 102 bits (255), Expect = 4.240e-22
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 0
Query:    1 MGRKKKRA----APNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLP-KRRRDNHLSPVALPHAAPTTAYVDGRANYITSSAPAAPPY 144
            MG+KKKR      P    RI+CYYCDR F+ E+ L+ HQK +HF+C  CNK++ +   M+VH  Q+H+  +  VPN+ PGRESV V+V GM G+P    A +     P KR R +  +P+  P   P  A + G      +  P  PP+
Sbjct:    1 MGKKKKRDDGIDEPKIA-RIYCYYCDRVFEDEKVLIMHQKARHFKCNYCNKKLSTAGGMVVHVAQVHHETILHVPNAKPGRESVDVEVYGMEGVPGYSSAKSSIMEDPLKRMRVDGAAPMLYP---PIMAPMPGYPYQFPAPVPPRPPF 145          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A836C1R5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C1R5_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 5.670e-22
Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDDSHLPKRRRDNHLS 113
            MG+KKK      ++ +FCYYCDRTF  E  L+ HQK KHF+CP+CN++M + Q +  HA Q+H L++  VP +  GR+S+AV++ GM+G+P       DD+ LP +  +   S
Sbjct:    1 MGKKKKNQ--KEQEIVFCYYCDRTFDDESALIVHQKNKHFKCPECNRKMNTAQGLATHAFQVHKLQINSVPGAKAGRDSMAVEIFGMAGVP-------DDAPLPAKLAEGPAS 104          
BLAST of Gcaud8772.t1 vs. uniprot
Match: A0A7S2SG26_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SG26_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.210e-22
Identity = 53/124 (42.74%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    1 MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRMLSVQSMLVHADQMHNLRVTMVPNSVPGR-ESVAVDVLGMSGIPNSFYASTDDSHLPKRRR-DNHLSPVALPHAAP 122
            MG+KKK+ A   +++ +CYYCD+ F  E +L+ HQK KHF+C QCNK+ ++V SM VH  Q+H++ +  VPN+V GR ++V++D+ GM  +P +      D H+ KR + D  L PV  P   P
Sbjct:    1 MGKKKKKTA--TQEKAWCYYCDKEFVDEHQLIQHQKVKHFKCTQCNKKFMNVPSMGVHLQQVHSITLKQVPNAVEGRRDNVSLDISGMRALPQN------DVHVAKRMKLDMSLPPVGYPIPPP 116          
The following BLAST results are available for this feature:
BLAST of Gcaud8772.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZH5_9FLOR4.280e-4355.19Protein SUPPRESSOR OF FRI 4 n=1 Tax=Gracilariopsis... [more]
A0A438E4P3_VITVI3.330e-2347.42Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera... [more]
D0MWC9_PHYIT4.780e-2344.14C2H2-type domain-containing protein n=10 Tax=Phyto... [more]
A0A438J3X1_VITVI9.640e-2347.42Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera... [more]
T1E1I5_SILLA1.160e-2248.45C2H2-type zinc finger protein (Fragment) n=1 Tax=S... [more]
A0A329STQ4_9STRA1.250e-2243.24C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
F0WJC3_9STRA1.370e-2242.86Uncharacterized protein AlNc14C120G6650 n=1 Tax=Al... [more]
A0A6G0W4Y8_9STRA4.240e-2240.27C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A836C1R5_9CHLO5.670e-2243.36Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A7S2SG26_9STRA6.210e-2242.74Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 40..63
e-value: 0.32
score: 20.1
coord: 16..39
e-value: 0.32
score: 20.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..63
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 18..39
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 16..39
score: 9.244638
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 2..65
e-value: 2.2E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..336
NoneNo IPR availablePANTHERPTHR23215ZINC FINGER PROTEIN 207coord: 1..284
NoneNo IPR availablePANTHERPTHR23215:SF0BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207coord: 1..284
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 15..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_40_length_68803_cov_4.393963contigNODE_40_length_68803_cov_4.393963:60636..61734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8772.t1Gcaud8772.t1Gracilaria caudata M_176_S67 malemRNANODE_40_length_68803_cov_4.393963 60636..61734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8772.t1 ID=Gcaud8772.t1|Name=Gcaud8772.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=337bp
MGRKKKRAAPNARDRIFCYYCDRTFQQEQELLSHQKEKHFRCPQCNKRML
SVQSMLVHADQMHNLRVTMVPNSVPGRESVAVDVLGMSGIPNSFYASTDD
SHLPKRRRDNHLSPVALPHAAPTTAYVDGRANYITSSAPAAPPYGSAHLY
SYGAQPATRAASHSYQHGATYNYSPPPAAHSASNYAYGGYNAPHLNYNAA
QPAHSSASVAPAYAPSAGAAPHTNYAQPTSYGYTPAATLPPIRTTYPSAT
QPDYVQSRAPISTAPSAPYASAEATRSPTSHYNHYAPHNRHQAPTRLRLR
RARSFSSCGTAVRKSSALNCPDMSPSLAVPPRHRKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf