Gcaud8596.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8596.t1
Unique NameGcaud8596.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length219
Homology
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A2V3J591_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J591_9FLOR)

HSP 1 Score: 295 bits (754), Expect = 4.570e-98
Identity = 146/219 (66.67%), Postives = 177/219 (80.82%), Query Frame = 0
Query:    1 MSTEPDPVESQVRAELASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGYSVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQP-KEQGAIKGVLKYLDWGSWR 218
            MS   DPVE +VR ELA++G+ LDELLNGGKVVSLTRKL  LQ ES+SL +++ +Y+ +Q++I KL  +  REKRQVMQ+WLKQ+FVFQA +FL  G  L+FDAVPG SVPLVGQALGFW TWLFTIP+LRARKGT KAEKSALN+SFL +P++NV LP FTKNCGLIWTADV +LAA Y YY+ RA       +  +P +E+GAI+GVLKYLDWGSW+
Sbjct:   48 MSVSDDPVERRVREELAADGVRLDELLNGGKVVSLTRKLENLQTESNSLTEDNPSYNDLQRRIAKLQSQLVREKRQVMQSWLKQLFVFQAFLFLAIGGALAFDAVPGNSVPLVGQALGFWTTWLFTIPALRARKGTAKAEKSALNVSFLIMPLVNVFLPAFTKNCGLIWTADVSVLAACYLYYYARAYATVAASAGSEPVREKGAIRGVLKYLDWGSWK 266          
BLAST of Gcaud8596.t1 vs. uniprot
Match: R7QH93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH93_CHOCR)

HSP 1 Score: 249 bits (636), Expect = 8.630e-80
Identity = 128/216 (59.26%), Postives = 157/216 (72.69%), Query Frame = 0
Query:    6 DPVESQVRAELASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGY-SVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRAL--VNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            DP+  +VR ELA++GINLDELLN GKVV+LTRKL  L  ES+ L   S      ++K+ KL  +  REKRQVMQ WLKQ+F+ QA VF+  G +L+ D VPG  SVPLVG+ALGFW TWLFTIP+LRARKGT+K EKSALN++FL  P+LNV LP  TKNCG+IW ADV +L A YA+Y   A    +  ++     KEQG +KG+LKYLDWGSWR
Sbjct:   77 DPMTRRVRDELAADGINLDELLNAGKVVNLTRKLEMLTAESEKLTAGSPELQDAKQKMSKLESDLVREKRQVMQNWLKQLFLLQAIVFIGIGGVLANDVVPGVDSVPLVGRALGFWTTWLFTIPALRARKGTSKTEKSALNVAFLATPLLNVALPALTKNCGIIWAADVALLGACYAFYGITAKRGADGDEEGNRPVKEQGKVKGILKYLDWGSWR 292          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A7J7ILM3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILM3_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 8.840e-45
Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = 0
Query:    6 DPVESQVRAELASEGINLDELLNGGKVVSLTRKL--HKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGYSVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQG---------AIKGVLKYLDWGSWR 218
            D +E+ VR EL ++GI LD+LLN  KV+SL RK+  ++++    S  + +     +++++ K   E  +EKR +M+ WLK +FV Q  +  + G  ++F++    S+PL  +ALGFWM WLFTIPSLRARK +T AEK+ALN+SFL  P++N+ LP   K+ G +W A V+ L   Y YY   A V  K  +      Q           +  VL++LDWGSWR
Sbjct:   64 DSLEATVRRELEAQGIELDQLLNPSKVISLERKIRDYRVKLGEVSTTRTTSEKERLERRLSKAQRELEQEKRAIMRQWLKNLFVAQGVLTALLGGWMAFES----SLPLYLRALGFWMIWLFTIPSLRARKPST-AEKNALNVSFLLAPLMNLFLPMIVKDPGQLWAAQVIQLLGCYLYYGVWASVPEKSTTSPSASTQANAFRKRPAIRLPSVLRWLDWGSWR 282          
BLAST of Gcaud8596.t1 vs. uniprot
Match: M2VTY8_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTY8_GALSU)

HSP 1 Score: 144 bits (363), Expect = 1.490e-39
Identity = 88/197 (44.67%), Postives = 121/197 (61.42%), Query Frame = 0
Query:   24 DELLNGGKVVSLTRKLHKLQRESD-SLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGYS-VPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            +ELLN  K+ SL R+  +L  + + +L K+  N   +Q ++EKL      EKR VM + L+ +FV QA V L  G LL+ +  P    VPLV +ALGFWM WLFTIPSLRARK    AEK+ALN++FL  P+ NV +P   K+  L+W  +V ++ + Y YYF  +    + QS      Q  I+G+L+YLDWGSWR
Sbjct:   30 EELLNPAKLASLQRQYKELLEQFEQTLDKH--NRKEMQLRLEKLERNIELEKRSVMTSGLRSLFVVQAIVSLSVGGLLAANKFPFVQEVPLVFRALGFWMVWLFTIPSLRARK-PNMAEKNALNVAFLACPVANVVIPFVNKDTFLLWFVNVSVVLSLYGYYFFLSDEAVRAQS------QLKIRGILRYLDWGSWR 217          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.400e-38
Identity = 85/211 (40.28%), Postives = 130/211 (61.61%), Query Frame = 0
Query:   10 SQVRAELASE-GINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGYS-VPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            ++V AE+  E G+ LD+L+N  KV++L R L KL+   ++     ++ S ++K I+    +   EKR VMQ WLKQIFV QAA+ ++    + +D VPG+  V L  + LGFW+ WLF IPSLRARK T  AEK+ALNI+F+  P++++ LP  TK+   I+ A++ + AA Y Y F     +  +   D+ K+   ++ + K LD+GS R
Sbjct:   71 ARVAAEVERESGVALDQLINPSKVINLERDLVKLRATLETA--TGDSASELRKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITKDPVSIYWANLAVCAASYVYGFA----SGGQSEEDEAKQPQWVRFIFKALDFGSGR 275          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A1X6NZQ5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZQ5_PORUM)

HSP 1 Score: 132 bits (332), Expect = 7.470e-36
Identity = 66/144 (45.83%), Postives = 95/144 (65.97%), Query Frame = 0
Query:   78 MQTWLKQIFVFQAAVFLVAGALLSFDAVPGYS---VPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            MQ WLK++F+ QAA+      LL++   PG+    VPLVG+ LGFW+ WLFT+P+LRARK   KAEKSA N++FL +P+LNV  P  +++  LIW+ADV ++ A + +Y    L +         KE+  I+G L++LDWGSW+
Sbjct:    1 MQLWLKRVFLGQAALSAAVSGLLAWGVAPGFGADGVPLVGRVLGFWLLWLFTVPALRARK-PEKAEKSAWNVAFLGMPLLNVAAPFVSRDPALIWSADVALMVAVFVWYVV--LADSGDGGGGSAKEEVKIRGWLRWLDWGSWK 141          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A7S2TND9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TND9_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 1.530e-34
Identity = 77/204 (37.75%), Postives = 120/204 (58.82%), Query Frame = 0
Query:   16 LASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGY-SVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            +  +G+ LD+L+N  K + L ++L +  +E ++   + E    +Q +I++   +   EKR VM+  LK +F+ Q+ + +V   LL+ +  PGY  +P+  QALGFW  WLFTIPSLRARK   + EK ALN++FL  P+LN+ +P   K+ GLIW A+VV +A  YA+ F            D  +    I G+ ++LDWG+ R
Sbjct:   99 MKEQGVALDQLMNPMKAIRLYKELAEKTQELETT--SGEALETLQMEIQETTAKLNIEKRSVMREELKAVFLIQSLLSIVVSGLLATNHFPGYPDLPIAAQALGFWTIWLFTIPSLRARK-PAEVEKQALNVAFLATPLLNLAIPSVAKDPGLIWAANVVAIALSYAWAFIFV------DETDAAEAGLKIGGMARWLDWGTGR 293          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A7S3EKL0_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKL0_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 1.560e-34
Identity = 82/210 (39.05%), Postives = 115/210 (54.76%), Query Frame = 0
Query:   10 SQVRAELASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGY-SVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            ++V   +  EG+ LD L+N  KV+ L  +L   + E+DSL +            EKL     +EKR VMQ WL+ +F+ Q       G +++   VP    VPL  + LGFW+ WLFTIP+LRARK   K EKSALN +FL I + NV  P FTK    +WT D+ I+   Y Y +  +  +    ++  PK    IKG L++ DWGSW+
Sbjct:   60 AKVEQRVKDEGVPLDVLMNPAKVLDLEARL---ELEADSLTEEER---------EKLKATLIKEKRMVMQDWLRNVFLVQGWGSAAIGGIMASGHVPFVPDVPLGARVLGFWLIWLFTIPALRARK-PAKWEKSALNFAFLGIILANVITPFFTKEPLTLWTIDMAIMGICYGYSYNAS--SKDGDAIASPK----IKGALRWFDWGSWK 250          
BLAST of Gcaud8596.t1 vs. uniprot
Match: W7TZ94_9STRA (Resistance to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.390e-34
Identity = 80/224 (35.71%), Postives = 131/224 (58.48%), Query Frame = 0
Query:    3 TEPDPVESQVRAELASE-GINLDELLNGGKVVSLTRKLHKLQRE-SDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGYS-VPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQ-----GAIKGVLKYLDWGSWR 218
            +E DP+  ++R ++  E G++LD+LLN  KVV+L  +L  L+ E + + Q   +  + ++ +IEK   +   EKR VM+ WLK +F+ Q+ + +V   ++++DA+PG+  +PL  +A  FW  W+FTIPSLRAR+     EK AL+++FL  P++++ +P  T++   IW A+ V     Y Y F       + +  D   E+     G +K  LK LDWGS R
Sbjct:   68 SEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGA-VEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGR 290          
BLAST of Gcaud8596.t1 vs. uniprot
Match: A0A7S0BLT0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLT0_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 3.680e-33
Identity = 79/210 (37.62%), Postives = 115/210 (54.76%), Query Frame = 0
Query:   10 SQVRAELASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQKNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALLSFDAVPGY-SVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLTIPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPKEQGAIKGVLKYLDWGSWR 218
            +++   +  EG+ LD L+N  KV+ +  +L   + E++++    +         EKL     +EKR VMQ WL+ +F+ Q       G +++   VP    VPL  + LGFW+ WLFTIP+LRARK   K EKSALN +FL I + NV  P FTK    IWT D+VI+   Y Y +  +  +     +  PK    IKG L++ DWGSW+
Sbjct:   63 ARIEKRVKDEGVPLDILMNPAKVLDIEARL---ELEANTISDEEK---------EKLQASLIKEKRMVMQDWLRNVFLVQGWGSAAIGGIMASGHVPFVPDVPLGARVLGFWLIWLFTIPALRARK-PAKWEKSALNFAFLGIILANVITPFFTKEPLTIWTMDMVIMGLCYGYAYNASSADGG--GIASPK----IKGALRWFDWGSWK 253          
The following BLAST results are available for this feature:
BLAST of Gcaud8596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J591_9FLOR4.570e-9866.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QH93_CHOCR8.630e-8059.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7J7ILM3_9RHOD8.840e-4540.63Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2VTY8_GALSU1.490e-3944.67Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A835YV04_9STRA6.400e-3840.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X6NZQ5_PORUM7.470e-3645.83Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2TND9_9EUKA1.530e-3437.75Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3EKL0_9RHOD1.560e-3439.05Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
W7TZ94_9STRA2.390e-3435.71Resistance to phytophthora 1 protein n=3 Tax=Monod... [more]
A0A7S0BLT0_9RHOD3.680e-3337.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 112..130
NoneNo IPR availableTMHMMTMhelixcoord: 167..184
NoneNo IPR availableTMHMMTMhelixcoord: 143..162
IPR044966Protein RESISTANCE TO PHYTOPHTHORA 1, chloroplasticPANTHERPTHR36359PROTEIN RESISTANCE TO PHYTOPHTHORA 1, CHLOROPLASTICcoord: 78..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_564_length_21844_cov_4.352457contigNODE_564_length_21844_cov_4.352457:20736..21392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8596.t1Gcaud8596.t1Gracilaria caudata M_176_S67 malemRNANODE_564_length_21844_cov_4.352457 20736..21392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8596.t1 ID=Gcaud8596.t1|Name=Gcaud8596.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bp
MSTEPDPVESQVRAELASEGINLDELLNGGKVVSLTRKLHKLQRESDSLQ
KNSENYSVIQKKIEKLHIEKTREKRQVMQTWLKQIFVFQAAVFLVAGALL
SFDAVPGYSVPLVGQALGFWMTWLFTIPSLRARKGTTKAEKSALNISFLT
IPILNVCLPGFTKNCGLIWTADVVILAAFYAYYFTRALVNPKKQSLDQPK
EQGAIKGVLKYLDWGSWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044966RPH1