Gcaud8595.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8595.t1
Unique NameGcaud8595.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length74
Homology
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BLAST of Gcaud8595.t1 vs. uniprot
Match: R7QH87_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH87_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 1.530e-23
Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:    5 AKRLPFEKPIFESELLDKAVAERESCRRLEMYGNIAVIAVGLSAVARFGYYAIYGKEGGAKALPTRSA 72
            A++LPFEKPI+ESE+L KA  E +S ++LE YGNIAVIAVG+S +AR GYY +YGKEGGA+A+P R+A
Sbjct:   11 AQKLPFEKPIYESEILRKAKQEVDSNKKLEFYGNIAVIAVGISVLARVGYYIVYGKEGGAQAVPRRTA 78
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BLAST of Gcaud8595.t1 vs. uniprot
Match: A0A1X6NK32_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK32_PORUM)

HSP 1 Score: 69.3 bits (168), Expect = 8.800e-14
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 0 
Query:    1 MRAEAKRLPFEKPIFESELLDKAVAERESCRRLEMYGNIAVIAVGLSAVARFGYYAIYGKEGGAKALP 68
            + + + RLPFEKP+F+S LLDKA  E  S  +LEMY N+ +I +  S  A+ GY+A+ GK GGA  LP
Sbjct:   27 LASSSPRLPFEKPMFDSPLLDKAREEARSIHKLEMYTNVLIIGLVASITAQVGYFAVNGKPGGADPLP 94
The following BLAST results are available for this feature:
BLAST of Gcaud8595.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QH87_CHOCR1.530e-2366.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NK32_PORUM8.800e-1450.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..73
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_564_length_21844_cov_4.352457contigNODE_564_length_21844_cov_4.352457:19540..20006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8595.t1Gcaud8595.t1Gracilaria caudata M_176_S67 malemRNANODE_564_length_21844_cov_4.352457 19540..20006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8595.t1 ID=Gcaud8595.t1|Name=Gcaud8595.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=74bp
MRAEAKRLPFEKPIFESELLDKAVAERESCRRLEMYGNIAVIAVGLSAVA
RFGYYAIYGKEGGAKALPTRSAK*
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