Gcaud8582.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8582.t1
Unique NameGcaud8582.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length137
Homology
BLAST of Gcaud8582.t1 vs. uniprot
Match: A0A2V3IU46_9FLOR (Programmed cell death protein 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU46_9FLOR)

HSP 1 Score: 162 bits (411), Expect = 3.640e-49
Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0
Query:    2 EDAELAQLRAQRLAQMRAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIR 120
            +D ELAQ RAQRLAQMR GA    Q PS +ELE+RRKQ+EA+++QRR+ILNQIMT +AREKLANIRLVKPERA+QVETYLINSAQ GQL GKV E+QVKD+LRS+TEQTQKRTKVTI+R
Sbjct:    3 DDPELAQWRAQRLAQMR-GAAGGAQGPSAEELEMRRKQEEAKQDQRRMILNQIMTPEAREKLANIRLVKPERAEQVETYLINSAQSGQLGGKVGEDQVKDLLRSVTEQTQKRTKVTIMR 120          
BLAST of Gcaud8582.t1 vs. uniprot
Match: R7QHW4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHW4_CHOCR)

HSP 1 Score: 135 bits (341), Expect = 1.690e-38
Identity = 79/135 (58.52%), Postives = 111/135 (82.22%), Query Frame = 0
Query:    2 EDAELAQLRAQRLAQMRAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFDXXXXXXXXDF 136
            +D  LAQ RAQR+AQM+ G       PS +++E +RK+QE  +EQRR++L QI++++AREKL+NIRLVKPERA+QVE Y++++AQ GQL GK++EEQ KD+LR++TE+ Q + KVTI+RR+ ++DXXXXXXXXDF
Sbjct:    3 DDPALAQWRAQRMAQMQGGGMPGQSGPSAEQVEQQRKKQEVMQEQRRIMLKQILSNEAREKLSNIRLVKPERAEQVENYILSAAQSGQLPGKISEEQFKDLLRNVTEKEQSKNKVTIMRRRPLYDXXXXXXXXDF 137          
BLAST of Gcaud8582.t1 vs. uniprot
Match: A0A383W3Y5_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W3Y5_TETOB)

HSP 1 Score: 94.7 bits (234), Expect = 2.340e-22
Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQM---RAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            MED EL  +R +R+A+M   R GAP A   PS ++ E     + A EEQRR +L+ +M  DARE+LA + LVKP++A+ VE  ++ +A+ G L  KVTE+Q+K +L  ++E+    +K+TI RR+ +F+
Sbjct:    1 MEDPELEAIRQRRMAEMMAARGGAPGAQGMPSAEDAEQXXXXRRAAEEQRRTMLHAVMAPDARERLARVALVKPDKARNVENMILTAAKRGALQSKVTEDQLKGMLEQISERESAASKITIQRRRPMFE 129          
BLAST of Gcaud8582.t1 vs. uniprot
Match: A0A4P9XVY4_9FUNG (Programmed cell death protein 5-like protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XVY4_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 1.150e-20
Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQMRA--------------GAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRK 122
            MEDAEL  +RA+R+A+++A              G P        Q+ E   +QQ+  EE RR +L QI+ ++ARE+LA I +VKP++A+ VE  L+  A+GG L GKVTE+Q+ ++L ++ +QTQ++TK+   RR+
Sbjct:    1 MEDAELQAIRARRMAELQARRGXXXXXXXSAGLGMPGGAASTDGQDPEAEARQQQQAEEMRRNMLTQILDNNARERLARISIVKPDKARAVEDLLLRMARGGALRGKVTEQQLIELLENVNQQTQQQTKIVYNRRR 136          
BLAST of Gcaud8582.t1 vs. uniprot
Match: I3T953_MEDTR (Double-stranded DNA-binding-like protein n=5 Tax=IRL clade TaxID=2233839 RepID=I3T953_MEDTR)

HSP 1 Score: 88.6 bits (218), Expect = 5.570e-20
Identity = 50/126 (39.68%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQMRAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            M D EL  +R +R+ ++     +AG  P+ ++   +   +   EE+R+++L+QI++++ARE+LA I LVKPE+A+ VE  ++ +AQ GQ++ KVTEE++  +L  +  QT K+TKVTI RR+ V +
Sbjct:    1 MADPELEAIRQRRMQELMGRHGTAGNQPNPEQQSAQEDAKREAEERRQMMLSQILSAEARERLARIALVKPEKAKGVEDVILRAAQMGQIAEKVTEERLITLLEQINSQTAKQTKVTITRRRSVLE 126          
BLAST of Gcaud8582.t1 vs. uniprot
Match: A0A7S0G5E1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5E1_9RHOD)

HSP 1 Score: 87.4 bits (215), Expect = 7.410e-20
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 0
Query:   39 QQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            QQ AQEEQRR+ L QI+T  A E+LANI LVKP++A+Q+E YL+++AQ  +L G+V+EEQ+K +L   TE  +++ KVT+ RR+  FD
Sbjct:    6 QQRAQEEQRRIFLKQILTPQAAERLANIALVKPDKARQLENYLLSAAQSQRLGGQVSEEQLKSMLSKFTE-AERKPKVTVSRRRMNFD 92          
BLAST of Gcaud8582.t1 vs. uniprot
Match: I1K301_SOYBN (Uncharacterized protein n=7 Tax=Phaseoleae TaxID=163735 RepID=I1K301_SOYBN)

HSP 1 Score: 88.2 bits (217), Expect = 7.880e-20
Identity = 56/127 (44.09%), Postives = 89/127 (70.08%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQMRAGAPSAG-QPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            M D EL  +R +RL ++ AG    G Q  SEQE      ++EA EE+R+++L+QI++++ARE+LA I LVKPE+A+ VE +++ +AQ GQ++ KV+EE++  +L  +  QT ++TKVTI RR+ V +
Sbjct:    1 MADPELEAIRQRRLQELMAGHGGVGNQQNSEQEKAQDDAKREA-EERRQMMLSQILSAEARERLARIALVKPEKARGVEDFILRAAQMGQITEKVSEERLISLLEQINNQTTRQTKVTIQRRRSVLE 126          
BLAST of Gcaud8582.t1 vs. uniprot
Match: UPI000C1D0E26 (DNA-binding protein DDB_G0278111-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0E26)

HSP 1 Score: 87.4 bits (215), Expect = 1.460e-19
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQMRAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            M D EL  +R +R+ ++ A   S G P SEQ+      ++EA +EQR+++L+QI+TS+AR +LA I LVKPE+A+ VE  ++ +AQ GQ++ KV+EE++  +L     QT K TKVTI RR  V D
Sbjct:    1 MADPELEAIRQRRMQELMA-QHSMGNPDSEQQKSQDEAKREA-DEQRQMMLSQILTSEARARLARIALVKPEKARGVEDVILRAAQMGQIAEKVSEERLISLLEQFNTQTTKETKVTIRRRPSVLD 124          
BLAST of Gcaud8582.t1 vs. uniprot
Match: A0A7S0QD34_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QD34_9CRYP)

HSP 1 Score: 87.8 bits (216), Expect = 1.570e-19
Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    3 DAELAQLRAQRLAQM------RAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            D ELA +RA+R AQ+      RA  P A   PS+ + E R   Q A E+QR  IL  ++   AR++LANI +VKP++A+++E  LI +AQ G  SG+++EEQ+  +L S+TE+T+  TKVTI RR+   D
Sbjct:   15 DDELAAIRARRAAQLQGASGSRAALPGAAGGPSKADQEER---QRAAEDQRAQILKALLAPTARQRLANIAVVKPDKARKIEDMLIMNAQRGAFSGQISEEQLIQMLESITEKTKSSTKVTIQRRRDADD 141          
BLAST of Gcaud8582.t1 vs. uniprot
Match: UPI001CC49840 (DNA-binding protein DDB_G0278111 isoform X1 n=4 Tax=Mesangiospermae TaxID=1437183 RepID=UPI001CC49840)

HSP 1 Score: 86.7 bits (213), Expect = 3.240e-19
Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 0
Query:    1 MEDAELAQLRAQRLAQM--RAGAPSAGQPPSEQELELRRKQQEAQEEQRRVILNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVKDILRSLTEQTQKRTKVTIIRRKHVFD 126
            M D EL  +R +R+ ++  + G     Q  SEQ       ++EA EEQR+++L+QI++SDARE+LA I LVKPE+A+ VE  ++ +AQ GQ+  KV+EE++  +L  +  QT K+TKVTI RR+ V +
Sbjct:    1 MADPELEAIRQRRMQELMGQRGLNQGNQQNSEQXXXXEDSKREA-EEQRQLMLSQILSSDARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEEKLISLLEQINSQTSKQTKVTIQRRRSVLE 127          
The following BLAST results are available for this feature:
BLAST of Gcaud8582.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU46_9FLOR3.640e-4977.31Programmed cell death protein 5 n=1 Tax=Gracilario... [more]
R7QHW4_CHOCR1.690e-3858.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A383W3Y5_TETOB2.340e-2242.64Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
A0A4P9XVY4_9FUNG1.150e-2040.44Programmed cell death protein 5-like protein n=1 T... [more]
I3T953_MEDTR5.570e-2039.68Double-stranded DNA-binding-like protein n=5 Tax=I... [more]
A0A7S0G5E1_9RHOD7.410e-2053.41Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
I1K301_SOYBN7.880e-2044.09Uncharacterized protein n=7 Tax=Phaseoleae TaxID=1... [more]
UPI000C1D0E261.460e-1945.24DNA-binding protein DDB_G0278111-like n=1 Tax=Olea... [more]
A0A7S0QD34_9CRYP1.570e-1944.62Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
UPI001CC498403.240e-1943.75DNA-binding protein DDB_G0278111 isoform X1 n=4 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002836PDCD5-likePFAMPF01984dsDNA_bindcoord: 9..121
e-value: 1.6E-29
score: 102.4
IPR002836PDCD5-likePIRSFPIRSF015730TFAR19coord: 1..136
e-value: 3.8E-35
score: 116.8
IPR002836PDCD5-likePANTHERPTHR10840PROGRAMMED CELL DEATH PROTEIN 5coord: 1..129
IPR036883PDCD5-like superfamilyGENE3D1.10.8.140coord: 2..111
e-value: 4.8E-29
score: 102.5
IPR036883PDCD5-like superfamilySUPERFAMILY46950Double-stranded DNA-binding domaincoord: 9..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_15_length_84509_cov_4.337096contigNODE_15_length_84509_cov_4.337096:75808..76300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8582.t1Gcaud8582.t1Gracilaria caudata M_176_S67 malemRNANODE_15_length_84509_cov_4.337096 75808..76300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8582.t1 ID=Gcaud8582.t1|Name=Gcaud8582.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=137bp
MEDAELAQLRAQRLAQMRAGAPSAGQPPSEQELELRRKQQEAQEEQRRVI
LNQIMTSDAREKLANIRLVKPERAQQVETYLINSAQGGQLSGKVTEEQVK
DILRSLTEQTQKRTKVTIIRRKHVFDDDDDDDDDDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002836PDCD5-like
IPR036883PDCD5-like_sf