Gcaud8572.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8572.t1
Unique NameGcaud8572.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length126
Homology
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A2V3IRW4_9FLOR (30S ribosomal protein S16-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW4_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 5.950e-62
Identity = 98/127 (77.17%), Postives = 107/127 (84.25%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKL--QKKTNVQRAFSTRAGLNGLRDLVK 125
            MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSR EA+  IKRVCLNV+RIK+W+SVGAQP+DTVARLLGTAGVL  SPRV AG       KK N++RAFS+     GLR+L K
Sbjct:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRREASHKIKRVCLNVDRIKYWISVGAQPTDTVARLLGTAGVLAISPRVVAGSAARISGKKNNLERAFSSATTSGGLRELAK 127          
BLAST of Gcaud8572.t1 vs. uniprot
Match: R7QHL5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QHL5_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 2.920e-34
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDT 77
            MVVRIRLARWGQ +RPFYRIVAADARA+RDGRF+EVLG YNPL  S  EA  +IKRV LNV RI HW+SVGAQP+DT
Sbjct:    1 MVVRIRLARWGQRNRPFYRIVAADARARRDGRFLEVLGAYNPLAASAPEAKHHIKRVWLNVGRINHWISVGAQPTDT 77          
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A485KL45_9STRA (Aste57867_8768 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KL45_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.130e-31
Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKLQKK 104
            MVVR+RLARWG+ H PFYRIVAADAR  RDGR +E+LGTYNP+      A   +K + +N +R+K+W+SVGAQPSD V+ LLG A VLP  P     K    KK
Sbjct:    1 MVVRLRLARWGRTHAPFYRIVAADARCPRDGRHLEILGTYNPIA-----ATDGVKELRVNNDRVKYWLSVGAQPSDRVSFLLGLANVLPIPPSREYTKKSQSKK 99          
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A3R7A498_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A498_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.030e-31
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSP 92
            MVVR+RLARWG++H PFYRIVAADAR  RDGR +E+LGTYNPL      A   +K + +N +R+K+W+SVGAQPSD V+ LLG A VLP  P
Sbjct:   32 MVVRLRLARWGRVHSPFYRIVAADARYPRDGRHLEILGTYNPLA-----ATDGVKELRVNNDRVKYWLSVGAQPSDRVSFLLGLANVLPIPP 118          
BLAST of Gcaud8572.t1 vs. uniprot
Match: D0NQY6_PHYIT (30S ribosomal protein S16, putative n=22 Tax=Peronosporaceae TaxID=4777 RepID=D0NQY6_PHYIT)

HSP 1 Score: 113 bits (283), Expect = 2.550e-30
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKLQKK 104
            MVVR+RLARWG+   PFYRIVAADARA RDG+ +E+LGT+NP+      A   +K + +N +R+++W+SVGAQPSD VA LLG A VLP  P     K  + KK
Sbjct:    1 MVVRLRLARWGRKDLPFYRIVAADARAPRDGKHLEILGTFNPIA-----AGDGVKELRVNSQRVRYWMSVGAQPSDRVAHLLGLANVLPMPPTRQYTKKNVPKK 99          
BLAST of Gcaud8572.t1 vs. uniprot
Match: F0YLP6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLP6_AURAN)

HSP 1 Score: 112 bits (280), Expect = 4.720e-30
Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSP 92
            MVVRIRLAR+G+ HRPFYRIV AD+RA+RDG+ IE +GTY+P+P     A   IK V L  ERIK+W+S GAQPS  VA LLG AG+LP  P
Sbjct:    1 MVVRIRLARFGRKHRPFYRIVVADSRARRDGKHIERVGTYDPIP-----AKDGIKEVRLRTERIKYWMSCGAQPSSKVAWLLGKAGILPEQP 87          
BLAST of Gcaud8572.t1 vs. uniprot
Match: H3G6J0_PHYRM (Uncharacterized protein n=3 Tax=Oomycota TaxID=4762 RepID=H3G6J0_PHYRM)

HSP 1 Score: 111 bits (278), Expect = 9.500e-30
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSP 92
            MVVR+RLARWG+   PFYRIVAADARA RDG+ +E+LGT+NP+      A+  +K + +N +R+++W+SVGAQPSD VA LLG A VLP  P
Sbjct:    1 MVVRLRLARWGRKDLPFYRIVAADARAPRDGKHLEILGTFNPIA-----ASDGVKELRVNNQRVRYWMSVGAQPSDRVAHLLGLANVLPLPP 87          
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A8J5XI64_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XI64_DIALT)

HSP 1 Score: 111 bits (278), Expect = 1.550e-29
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKLQKK 104
            MV+R+RL RWG IH+PFYR+VAAD+RA+RDG FIE +GTY+P+    H+     K++  N +R K+W+SVGAQPSDTVARLL  AG+ P  P        L+KK
Sbjct:    1 MVLRLRLQRWGAIHKPFYRVVAADSRARRDGNFIERIGTYDPMID--HDGR---KKITFNFDRAKYWLSVGAQPSDTVARLLYFAGLYPKPPLRDVTISALKKK 99          
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A7S0C1J3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1J3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.200e-29
Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKLQKK 104
            MVVR+RL R+G+ H PFYR+VAA+ARA RDG+F+E++G+YNP+P+        IK V L  +R+++W+SVGAQPSD VA +LG  GVLP +P   + +  + KK
Sbjct:    1 MVVRLRLQRFGRTHSPFYRMVAANARAPRDGKFLEIVGSYNPIPNKH-----GIKEVRLKTDRLRYWISVGAQPSDRVAWVLGKFGVLPPAPPKFSPQKMIPKK 99          
BLAST of Gcaud8572.t1 vs. uniprot
Match: A0A834W2D4_9FABA (30S ribosomal protein S16-2, chloroplastic/mitochondrial-like n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W2D4_9FABA)

HSP 1 Score: 112 bits (279), Expect = 2.540e-29
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    1 MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEAARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMKLQKKTNVQRAFSTR 114
            MVVRIRL+R+G  ++PFYR++AAD+R+ RDG+ +EVLG YNPLP        N KR+ LN ER+K+W+SVGAQPS+ V R+L  AGVLP  P V  G+   ++ T    A + R
Sbjct:    1 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-----GQDNAKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMGRKGGERDTRPVDALTGR 109          
The following BLAST results are available for this feature:
BLAST of Gcaud8572.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRW4_9FLOR5.950e-6277.1730S ribosomal protein S16-1, chloroplastic n=1 Tax... [more]
R7QHL5_CHOCR2.920e-3477.92Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A485KL45_9STRA1.130e-3156.73Aste57867_8768 protein n=7 Tax=Saprolegniaceae Tax... [more]
A0A3R7A498_9STRA2.030e-3161.96Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
D0NQY6_PHYIT2.550e-3054.8130S ribosomal protein S16, putative n=22 Tax=Peron... [more]
F0YLP6_AURAN4.720e-3063.04Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
H3G6J0_PHYRM9.500e-3058.70Uncharacterized protein n=3 Tax=Oomycota TaxID=476... [more]
A0A8J5XI64_DIALT1.550e-2954.81Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0C1J3_9STRA2.200e-2951.92Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A834W2D4_9FABA2.540e-2951.7530S ribosomal protein S16-2, chloroplastic/mitocho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..87
e-value: 3.8E-33
score: 111.3
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 9..75
e-value: 3.3E-26
score: 91.0
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..109
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 2..85
score: 24.139742
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..116
e-value: 1.6E-40
score: 139.9
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_15_length_84509_cov_4.337096contigNODE_15_length_84509_cov_4.337096:45371..45811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8572.t1Gcaud8572.t1Gracilaria caudata M_176_S67 malemRNANODE_15_length_84509_cov_4.337096 45371..45811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8572.t1 ID=Gcaud8572.t1|Name=Gcaud8572.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=126bp
MVVRIRLARWGQIHRPFYRIVAADARAKRDGRFIEVLGTYNPLPHSRHEA
ARNIKRVCLNVERIKHWVSVGAQPSDTVARLLGTAGVLPFSPRVTAGKMK
LQKKTNVQRAFSTRAGLNGLRDLVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf