Gcaud8518.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8518.t1
Unique NameGcaud8518.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length215
Homology
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BLAST of Gcaud8518.t1 vs. uniprot
Match: A0A2V3IDE6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE6_9FLOR)

HSP 1 Score: 139 bits (349), Expect = 1.650e-37
Identity = 73/164 (44.51%), Postives = 109/164 (66.46%), Query Frame = 0 
Query:   49 SVRGWQERALEKATNELYTLKKELRMVEAIYKCEKKKSKMLRDLFRKKKSSPCSRRMNGKDR-KCHKRYGLRKQVKRGQRMCRRNKSCLKKYVWPLQWKLKKLMADCKCENGASIMKMIWKTKKIRCGKGRKAWKVKKDIGKLKKRITYLEKMIMIKPSVAPRP 211
            SVRGWQ  AL +A  +L  L+ ELR+ +  YKC  +K+++LR L+ KKK   C+     K R +C KR GL+  +K  ++ CR N+ CL + VWPLQW+L+K    C C     +MK IW+TKK++CG+ RK + +K +I K+++++ YL+K++  KPSVAPRP
Sbjct:   53 SVRGWQRTALGRAQQKLNDLQAELRLSQQSYKCRSEKTRVLRSLYWKKKMLKCTMSNMRKARFECKKRKGLQTMMKWRKKTCRWNRRCLAEKVWPLQWRLRKAKEGCDCVMKLKVMKQIWRTKKVKCGRYRKVYVIKAEIKKVQRKVEYLKKLLRPKPSVAPRP 216
The following BLAST results are available for this feature:
BLAST of Gcaud8518.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDE6_9FLOR1.650e-3744.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_243_length_34547_cov_4.802386contigNODE_243_length_34547_cov_4.802386:7852..8496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8518.t1Gcaud8518.t1Gracilaria caudata M_176_S67 malemRNANODE_243_length_34547_cov_4.802386 7852..8496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8518.t1 ID=Gcaud8518.t1|Name=Gcaud8518.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=215bp
MKFAITLPFLLISASIATAATLQSESHEWTTVEESASSSSLSSGLTRVSV
RGWQERALEKATNELYTLKKELRMVEAIYKCEKKKSKMLRDLFRKKKSSP
CSRRMNGKDRKCHKRYGLRKQVKRGQRMCRRNKSCLKKYVWPLQWKLKKL
MADCKCENGASIMKMIWKTKKIRCGKGRKAWKVKKDIGKLKKRITYLEKM
IMIKPSVAPRPKRE*
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