Gcaud85.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud85.t1
Unique NameGcaud85.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length61
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud85.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 1..59
e-value: 6.5E-6
score: 27.8
NoneNo IPR availableCDDcd00024CD_CSDcoord: 2..46
e-value: 2.41248E-4
score: 32.8341
IPR023780Chromo domainPFAMPF00385Chromocoord: 2..47
e-value: 5.9E-6
score: 26.1
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 1..61
score: 9.589101
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4570_length_2163_cov_4.981178contigNODE_4570_length_2163_cov_4.981178:518..698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud85.t1Gcaud85.t1Gracilaria caudata M_176_S67 malemRNANODE_4570_length_2163_cov_4.981178 518..698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud85.t1 ID=Gcaud85.t1|Name=Gcaud85.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=61bp
MVVSRLLKLVDSKDGLMVHIRWKGLPESEDTLEPIARVYEDVPKLITRLV
KRKATDTHLAX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023780Chromo_domain
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf