Gcaud8496.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8496.t1
Unique NameGcaud8496.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length142
Homology
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BLAST of Gcaud8496.t1 vs. uniprot
Match: A0A2V3IVP8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVP8_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.860e-12
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:    2 PQYDQRPLPTSTPPNLLAHVNFTSTLKPPCPRNGQFSSAALVQSFLTHVSER 53
            P YDQRP+P  +PP L  HV +T+T  PPCP NGQF+SAALV S L HV  R
Sbjct:   93 PDYDQRPIPPGSPPGLAEHVAYTTTFDPPCPENGQFTSAALVSSLLEHVLSR 144
The following BLAST results are available for this feature:
BLAST of Gcaud8496.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVP8_9FLOR3.860e-1261.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2633_length_5108_cov_3.896552contigNODE_2633_length_5108_cov_3.896552:1885..3334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8496.t1Gcaud8496.t1Gracilaria caudata M_176_S67 malemRNANODE_2633_length_5108_cov_3.896552 1885..3334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8496.t1 ID=Gcaud8496.t1|Name=Gcaud8496.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=142bp
XPQYDQRPLPTSTPPNLLAHVNFTSTLKPPCPRNGQFSSAALVQSFLTHV
SERSNAHWLQLSLACEQKARLPPRTRIVGLALFDGIAQSPTFRFPIPSDL
FVSVLESPFATGNPDAALQSNGHVPIPENGTDQFPSETKIG*
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