Gcaud8461.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8461.t1
Unique NameGcaud8461.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length864
Homology
BLAST of Gcaud8461.t1 vs. uniprot
Match: A0A2V3IY24_9FLOR (Nitric oxide synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY24_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 1.510e-45
Identity = 111/284 (39.08%), Postives = 160/284 (56.34%), Query Frame = 0
Query:    9 APSYQFLFENDAYASPHLSENGCAFLSAKTGFVPPQPLPDLPEPCIAWANLAQRLQEFCKSNDWNALIAQFPANISVD--GLADEHLLRANICVGSIAHALRNAGNLEVPDSIMKTWEQISHRLGRPIPSLSQHLMSHYITLKQSRKLPMWIQTEAMAFVAQIIIIPDAIRQEYLI-------ADRPLPGITARAQNAIVQRDDAGLKQCLVELIHVVDEVTKAFRDSSDPRAFSDCFMDPIEWSRAIELSAARIHAGEKAGSGLQFPSFHLLDIFFGRDRYET 283
            +PSY +L     Y+SP+  +NG +FLS   GF+P  PLP LP P   W  LA +L     +N WN+ I+  P     D   LADEHLLRANI +GS+AHA+ +     +P+ I   W ++S RLGR +P L+      Y T          I+         I + P    + Y+I       A RPL  + A AQNA+V  +   L++ LV+++  ++ + KAF ++ DPR F+   +DP++WSR+I++SAA +  GE+ GSGL FPS HLLD FF R +YE+
Sbjct:    5 SPSYAYL-----YSSPN--DNGKSFLSVSNGFLPSGPLPFLPHPFSLWHALALQLPSIYDTNSWNSFISSLPDRFDFDVVDLADEHLLRANIALGSMAHAIYHVAKRPIPECISVPWMEVSERLGRDMPCLASIDFLVYNTETLPELCFDKIEYPYKQVRPSITMTPLRAEKNYIIKGYSIEHAARPLASLIAEAQNAVVNDNTGSLREALVKMVTALEGMAKAFTEA-DPRPFNHFCVDPVDWSRSIDISAAPVKKGERGGSGLLFPSIHLLDSFFCRKKYES 280          
BLAST of Gcaud8461.t1 vs. uniprot
Match: UPI001A964CFB (hypothetical protein n=1 Tax=Pedobacter sp. SYSU D00873 TaxID=2810310 RepID=UPI001A964CFB)

HSP 1 Score: 113 bits (282), Expect = 8.150e-22
Identity = 86/293 (29.35%), Postives = 137/293 (46.76%), Query Frame = 0
Query:    9 APSYQFLFENDAYASPHLSENGCAFLSAKTGFVPP-QPLPDLPEPCIAWANLAQRLQEFCKSNDWNALIAQFPA-NISVDGLADEHLLRANICVGSIAHAL---RNAGNLEVPDSIMKTWEQISHRLGRPIPSLSQ-HLMSHYITLKQS------RKLPMWIQT-----EAMAFVAQIIIIPDAIRQEYLIADRPLPGITARAQNAIVQRDDAGLKQCLVELIHVVDEVTKAFRDSSDPRAFSDCFMDPIEWSRAIELSAARIHAGEKAGSGLQFPSFHLLDIFFGRDRYETV 284
            APSY  +  N A  +  L      FLS   GF+P  QPL +LP    AW NLA  L    K+        + P  + S   L D++L RA++     AHA        +L++P++I+  W+QI+ RL RP+P LS   L+ +   LK          L + + T     E + ++ Q          E L    P+    A  Q AI+Q ++A +   L ++  V++++T+      +P   S  ++DPI W++ +   A  +  G +  SG   P FHL+D F  R +Y+T+
Sbjct:   11 APSYLSVL-NAARRNTELGHENLGFLSFDKGFMPVNQPLQNLPPEFSAWDNLASNLPVHYKNQTLRRAFRELPVLDFSKQNLGDKYLCRASVLASMFAHAYVRCEREEDLDIPNTILLPWQQITQRLNRPVPFLSYIDLIVYNWKLKNQGEDFEVENLSLLVPTVDNNEERIFYLTQT---------EILYKSHPIVKEVAEVQTAILQDNEARVISGLQKIQRVIEDLTEDSFLKINPNPRSKTYVDPIVWAKTVAPFAVPLKEGVQGPSGTSSPVFHLIDTFIERAKYDTI 293          
BLAST of Gcaud8461.t1 vs. uniprot
Match: A0A841BKJ4_9ACTN (Sulfite reductase (NADPH) flavoprotein alpha-component n=1 Tax=Allocatelliglobosispora scoriae TaxID=643052 RepID=A0A841BKJ4_9ACTN)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-14
Identity = 72/265 (27.17%), Postives = 111/265 (41.89%), Query Frame = 0
Query:   33 FLSAKTGFVPPQP-LPDLPEPCIAWANLAQRLQE-FCKSNDWNALIAQFPANISVDGLADEHLLRANICVGSIAHALRNAG---NLEVPDSIMKTWEQISHRLGRPIPSLSQHLMSHY-----------ITLKQSRKLPMWIQTEAMAFVAQIIIIPDAIRQEYLIADRPLPGITARAQNAIVQRDDAGLKQCLVELIHVVDEVTKAFRDSSDPRAFSDCFMDPIEWSRAIELSAARIHAGEKAGSGLQFPSFHLLDIFFGRDRY 281
            FLS   GF+P +P L   P+   AW  +  RL E F +     A  A    +   + L D +LLRA+  +G  AHA +         +PDS+++ W  +SHRLG+  P++S   +  Y                   +P W       F          +  E+ +   P+ G    AQ A+V  D A L+  L+ ++  +  VT+A     DP   S   +D + W++ +  +   I  G  + SG   P  H LD F  R  Y
Sbjct:  150 FLSLAHGFLPAEPPLLAFPDSHRAWDEMTDRLPELFRRLTVRRAFDAMPVLDARPEALPDRYLLRASTLLGVFAHAYQYMAIDPPTALPDSLLRPWTTVSHRLGKKTPAVSYIDLFFYNWRLRDPAGPRALDNMDLLVPTWNNAAERVFYL--------VTTEFAMGLTPVLGAMLSAQEAVVADDPAALESSLLVILDRLQHVTQAIYPQIDPNPRSRYPLDQVLWAKTVGTAGVPIFDGAPSPSGTAQPQIHALDAFLERRDY 406          
BLAST of Gcaud8461.t1 vs. uniprot
Match: A0A4Q6B8F3_9PROT (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6B8F3_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 3.930e-14
Identity = 70/274 (25.55%), Postives = 123/274 (44.89%), Query Frame = 0
Query:   26 LSENGCAFLSAKTGFVPP-QPLPDLPEPCIAWANLAQRLQEFCKSNDWNALIAQFPA-NISVDGLADEHLLRANICVGSIAHA---LRNAGNLEVPDSIMKTWEQISHRLGRPIPSLSQHLMSHYITLKQSRKLPMWIQTEAMAFVAQIIIIPDA----------IRQEYLIADRPLPGITARAQNAIVQRDDAGLKQCLVELIHVVDEVTKAFRDSSDPRAFSDCFMDPIEWSRAIELSAARIHAGEKAGSGLQFPSFHLLDIFFGRDRYETV 284
            L      FLS   GF+P   P   +PE   AW  +A  L    +S +   +I + P  + S D L D +LLRA   +  + HA   +      ++P  + + W  +  RLGR      Q ++S+   +  + ++   +  + +      ++IP             + E L    P+ G  AR+ +A+ + D A + Q L  ++   + V        +P A S  F+D + W++ +   A  + AG +  SG   P F+LLD++FGR ++ET+
Sbjct:  296 LGHENLGFLSHSHGFMPKLPPKQSMPEAFKAWDAVAADLPRLYRSLELRRVIDRMPVLDASEDFLGDSYLLRAAALLAMMTHAYNYVETTAATDIPLCLTRPWSDVRRRLGR-----EQEVLSYIDLIVYNWRMLDPLAADPLRVENLDLLIPTVGNKEERFFYLTQTEILAQAAPVLGAIARSHDAMRRDDVAIVCQELQIILDAFESVVYESLPKINPNAASHSFVDAVTWAKTVAPFAVPLKAGVQGPSGTSSPIFNLLDVYFGRVKFETI 564          
The following BLAST results are available for this feature:
BLAST of Gcaud8461.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IY24_9FLOR1.510e-4539.08Nitric oxide synthase n=1 Tax=Gracilariopsis chord... [more]
UPI001A964CFB8.150e-2229.35hypothetical protein n=1 Tax=Pedobacter sp. SYSU D... [more]
A0A841BKJ4_9ACTN2.110e-1427.17Sulfite reductase (NADPH) flavoprotein alpha-compo... [more]
A0A4Q6B8F3_9PROT3.930e-1425.55Cytochrome b5 heme-binding domain-containing prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000898Indoleamine 2,3-dioxygenasePFAMPF01231IDOcoord: 34..168
e-value: 3.4E-7
score: 29.4
IPR037217Tryptophan/Indoleamine 2,3-dioxygenase-likeSUPERFAMILY140959Indolic compounds 2,3-dioxygenase-likecoord: 33..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_274_length_32647_cov_4.923609contigNODE_274_length_32647_cov_4.923609:15651..18504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8461.t1Gcaud8461.t1Gracilaria caudata M_176_S67 malemRNANODE_274_length_32647_cov_4.923609 15651..18504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8461.t1 ID=Gcaud8461.t1|Name=Gcaud8461.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=864bp
MTSSFNPTAPSYQFLFENDAYASPHLSENGCAFLSAKTGFVPPQPLPDLP
EPCIAWANLAQRLQEFCKSNDWNALIAQFPANISVDGLADEHLLRANICV
GSIAHALRNAGNLEVPDSIMKTWEQISHRLGRPIPSLSQHLMSHYITLKQ
SRKLPMWIQTEAMAFVAQIIIIPDAIRQEYLIADRPLPGITARAQNAIVQ
RDDAGLKQCLVELIHVVDEVTKAFRDSSDPRAFSDCFMDPIEWSRAIELS
AARIHAGEKAGSGLQFPSFHLLDIFFGRDRYETVKNTFRTMSSDTPQQLK
PWGTILLHNDVQRGLESLFASYMRAEPPLEGDALLNVIREDLGPMQLASP
NIVSHYDILKRIRIFLETRSVVIPRNPETGSLIGKRVIAAIWNGEEFEEE
RKRALDYFDAVRKGDVVLYSPVNTPTSPPPVPFRLQDPDAPANAGPALAV
PADVPAPAVPQPGAVVRNDPTDDDTYENKRASFFASKYRSRRDKFCGDLE
EDWGDHISTFMDFCTDQKLRGNERAQYLHYSLHGDALHFYKTDVRDKIRS
WGSIVSAFNDRYSSLTTREDISKKLESLHLSDFMKNEISPREALDSLIKE
IDRLSPMSHTEDRTDRRKRKFLSQSCQGIPWARNALSQAESRHFAYRELC
SELFSAEFNERKYTEGERRVKMNSESQDTDDVQYRPRLTSKAVNVVVEEP
DDREVLFSGPGRFGRTPASSSSFKPADGVRTNRAYQASISRRNSDMPAVL
NACWNCQKTNCRLYSCPHPRNEALIKRNRQMAKAWLRQNRAKKVNFVDNS
DDSDVARQLVETLLLSGDEAGVEDRTSPDEMICDVPTNLSAVHSTLRNRS
EHAMEDSSSDEGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000898Indolamine_dOase
IPR037217Trp/Indoleamine_2_3_dOase-like