Gcaud840.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud840.t1
Unique NameGcaud840.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length127
Homology
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BLAST of Gcaud840.t1 vs. uniprot
Match: A0A2V3J4X0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X0_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 3.390e-49
Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 0 
Query:    1 MNSKDAANEEPRSALNALIRSAHAFLDRAVEGAKKHSPLNEQKLQAADDAVAGVIHKAYHAVKRIAVNGNPVVILSSAAVLGAAPSLPFGPRAIIRNAGLAVAMASVMIYPDHIRSY 117
            M+SKD   ++  S L  +IRS H  LDR +  AK+HSPLNE+KL+AADDAVAGVIHK Y AVK+IAVNGNP VILS+A VLGAAPSLPFG R  IRNAGL VA+A+VMIYPDH+RSY
Sbjct:    1 MSSKDPVKDDSDSVLGRVIRSGHHLLDRTIAAAKRHSPLNEEKLKAADDAVAGVIHKGYQAVKKIAVNGNPAVILSAAGVLGAAPSLPFGVRTTIRNAGLGVAVAAVMIYPDHLRSY 117
The following BLAST results are available for this feature:
BLAST of Gcaud840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4X0_9FLOR3.390e-4970.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_490_length_23884_cov_4.522254contigNODE_490_length_23884_cov_4.522254:22071..22741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud840.t1Gcaud840.t1Gracilaria caudata M_176_S67 malemRNANODE_490_length_23884_cov_4.522254 22071..22741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud840.t1 ID=Gcaud840.t1|Name=Gcaud840.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=127bp
MNSKDAANEEPRSALNALIRSAHAFLDRAVEGAKKHSPLNEQKLQAADDA
VAGVIHKAYHAVKRIAVNGNPVVILSSAAVLGAAPSLPFGPRAIIRNAGL
AVAMASVMIYPDHIRSYFAAAPDKKE*
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