Gcaud8397.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8397.t1
Unique NameGcaud8397.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length766
Homology
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A2V3IXV1_9FLOR (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXV1_9FLOR)

HSP 1 Score: 1306 bits (3381), Expect = 0.000e+0
Identity = 654/765 (85.49%), Postives = 706/765 (92.29%), Query Frame = 0
Query:    1 MVLVDIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEGSAVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDYEPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQPSAAKSREEEKRPEHYEFLGS 765
            M +VDIDGLQVVFPY SLYPEQ +YMRELK AL+ GGHALLEMPSGTGKTITLLSLITA+LSTR ADKSVRKFVYCTRTVEEMQKVM+EMK+LVASRE+EL +PNDLVTVGLASRRHLC+H++VSRMEGSAVD+GCRALTSSWVRE +E + ER A  CKYFE+YDREGLD +L+PGVYNLVDLR+YG RRQWCPYFLARHS+MMANILVYSYHYLLDPKVAG+VSSELPPES+IVFDEAHNIDNVCIEALSVDLE+ TIRGALRNITQLNS IYRAKE+A ERLRGEY RL SG+P+AELNA A  P +G VF+GGEEI AAPVLP DIL+EAVPDSIRKAEEFV+FLDKLTRFLEKRAD   VTQEQPIPFL+QI  AC V+DKKVF ATYDRLISLL TV V+SWS+FKPLL VGDFIT+LSTYEKEGMAV+TEPYNDFTGDYEPVLRLACLDASLA+RWVM HFRTVVITSGTLSPLDTYPRMLNF V VSASFNMS+ERRCVCPLIMTRGSDQL+LSSKY+ RQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFM QVVKVW+EEGN LDE+RRLKL+FVETQDPVEASLAIQNYK ACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAE YQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYG VIFADKRF RAKLR+KLPKWI+QFL A+ LDLD+GTA+ E R FL++MAQPS AK+R EE     YE+LG+
Sbjct:    1 MGIVDIDGLQVVFPYASLYPEQLAYMRELKHALDSGGHALLEMPSGTGKTITLLSLITAYLSTRGADKSVRKFVYCTRTVEEMQKVMDEMKILVASREKELELPNDLVTVGLASRRHLCIHDTVSRMEGSAVDNGCRALTSSWVRESVE-DDERIAMSCKYFENYDREGLDSVLSPGVYNLVDLRIYGERRQWCPYFLARHSVMMANILVYSYHYLLDPKVAGIVSSELPPESIIVFDEAHNIDNVCIEALSVDLEERTIRGALRNITQLNSVIYRAKEAAEERLRGEYHRLVSGIPIAELNAAANHPHNGHVFSGGEEIPAAPVLPNDILKEAVPDSIRKAEEFVQFLDKLTRFLEKRADTPTVTQEQPIPFLKQIGQACRVDDKKVFLATYDRLISLLKTVQVASWSDFKPLLQVGDFITVLSTYEKEGMAVITEPYNDFTGDYEPVLRLACLDASLAIRWVMTHFRTVVITSGTLSPLDTYPRMLNFPVVVSASFNMSLERRCVCPLIMTRGSDQLSLSSKYDNRQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMHQVVKVWSEEGNLLDELRRLKLVFVETQDPVEASLAIQNYKVACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAEKYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGAVIFADKRFVRAKLRNKLPKWIAQFLRAELLDLDVGTAMIEVRAFLLEMAQPSTAKARVEELEAPQYEYLGA 764          
BLAST of Gcaud8397.t1 vs. uniprot
Match: R7QGF0_CHOCR (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGF0_CHOCR)

HSP 1 Score: 1174 bits (3036), Expect = 0.000e+0
Identity = 587/759 (77.34%), Postives = 669/759 (88.14%), Query Frame = 0
Query:    1 MVLVDIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEGSAVDSGCRALTSSWVRERIEVNAERTA----PFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPD--DGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDYEPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQPSAAKSREE 753
            MVLVDIDGLQVVFPY +LYPEQ          L+ GGHALLEMPSGTGKTITLLSLITA+LS+R +D+SVRKFVYCTRTVEEM KVM EMK+LVASRE+EL V NDLVTVGLASR+HLC+HE+VS+MEGSAVDSGCRALT+SWVRE+I+   E       P CKYFE+YDREG+D IL PGVYNL DLR YG RRQWCPYFLARHSI +ANILVYSYHYLLDPKVAGVVS+ELPPES+IVFDEAHNIDNVCIEALSVDLE+PT+R A +N+TQL SAI  AK++A ERLR EY R+ SGLPLA+ NA  A+ +  +G +F GGEEI  APVLP D+LREAVP+SIRKAE F+EFL KL  FL++RA  E V+QE+P PFL + A+AC+V DK+VF+ TYDRLISLL+TV VSSWS+F+PL  VGDFIT+LSTYE+EGMAV+TEP+NDFTG+YEPVLRLACLDASLA+RW++  FRTVVITSGTLSPLDTYP+MLNF V VS+SFNMSM+RRCVCPL+MTRGSDQ+ALSSKYN RQTSD  RNYGHAL++LAG  PDGIVVFFVSYVFMQQVVKVWTEE N L+++R+LKL+FVETQDP+EASLAI+NY+AACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARL+FLAE  QIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFAD+RF+RAKLRSKLPKW++QFL+ + LDLD+G+ +AEAR FL+ MAQP+ AK R E
Sbjct:    1 MVLVDIDGLQVVFPYETLYPEQ----------LKSGGHALLEMPSGTGKTITLLSLITAYLSSRGSDRSVRKFVYCTRTVEEMHKVMEEMKILVASREKELKVQNDLVTVGLASRKHLCIHETVSQMEGSAVDSGCRALTASWVREQIQERQEDVEAALPPHCKYFENYDREGVDAILLPGVYNLSDLRAYGRRRQWCPYFLARHSITVANILVYSYHYLLDPKVAGVVSAELPPESIIVFDEAHNIDNVCIEALSVDLEEPTLRAASQNVTQLRSAISGAKQAARERLRQEYTRILSGLPLAQSNAQHARGNASEGHLFVGGEEIALAPVLPNDVLREAVPESIRKAEAFIEFLTKLVSFLQRRAATETVSQEKPTPFLVEAANACSVVDKRVFQGTYDRLISLLLTVQVSSWSDFRPLSRVGDFITILSTYEREGMAVITEPFNDFTGEYEPVLRLACLDASLAIRWIVERFRTVVITSGTLSPLDTYPKMLNFPVVVSSSFNMSMDRRCVCPLVMTRGSDQMALSSKYNDRQTSDVPRNYGHALVSLAGCTPDGIVVFFVSYVFMQQVVKVWTEESNILNDLRKLKLVFVETQDPIEASLAIKNYRAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLQFLAEYLQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADRRFSRAKLRSKLPKWLAQFLTTETLDLDIGSTMAEARAFLLDMAQPTPAKERVE 749          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A218W412_PUNGR (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218W412_PUNGR)

HSP 1 Score: 743 bits (1919), Expect = 1.410e-258
Identity = 389/743 (52.36%), Postives = 515/743 (69.31%), Query Frame = 0
Query:    5 DIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEG-SAVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
             I+ + V FPY ++YPEQYSYM ELKRAL+  GH LLEMP+GTGKTI LLSLIT++    S  +S  K +YCTRTV EM+K + E+K L   + + LG    ++ VGL+SR++LCV+  V   E   +VD+GCR LT+SWVR   E N     P C++FE Y+R G   +L PGVY L DLR +G  + WCPYFLARH +  AN++VYSY YLLDPKVAG++S E+  ESV+VFDEAHNIDNVCIEALSV + + T+ GA RN++++   I R K +   RLR EY RL  GL         AQ  D +V   G+  LA P LP DIL+EAVP +IR+A+ FV  L +L ++L+ R + + V +E P+ F+  I +   + D+K  +  YDRL SLL+T+ ++   EF P+ T+ DF T++ TY + G +++ EP++D   D  +PVL+L+C DASLA++ V + F+TVVITSGTLSP+D YPR+LNF+  VS SF MS+ R C+CP+++TRGSDQL +S+K++ R      RNYG  L+ +   VPDGIV FFVSY +M ++V  W E G  L EI + KL+F+ETQD VE +LA+ NY+ ACD GRGA+  SVARG+ AEGIDFD  YGR VI+FGVPFQYT S++L ARL +L + +QI+E DFL FDA+RQAAQC GRVIR+K DYG++IFADKR++R   RSKLP WI   L    L+L    A+  AR FL +MAQP
Sbjct:    4 QIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYAL--SKPQSPLKLLYCTRTVHEMEKTLAELKKLHDYQVQHLGPAARILAVGLSSRKNLCVNPRVVSAENRDSVDAGCRKLTASWVRALAEKNPN--VPTCEFFEEYERAGSGAVLPPGVYTLQDLRAFGKLKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSKMEQEIQRFKATDESRLRAEYNRLVEGL---------AQRGDLQV---GDTWLANPALPDDILKEAVPGNIRRADFFVRVLRRLVQYLKGRLETDSVEKEGPVTFVASINNHAGI-DQKTLKFCYDRLHSLLLTLEITDTDEFLPIQTICDFATLVGTYAR-GFSIIIEPFDDRMPDVRDPVLQLSCHDASLAIKPVFDRFQTVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDEIVNSWNETG-ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAVYIAREFLRRMAQP 727          
BLAST of Gcaud8397.t1 vs. uniprot
Match: D8T2U1_SELML (General transcription and DNA repair factor IIH helicase subunit XPD n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T2U1_SELML)

HSP 1 Score: 741 bits (1914), Expect = 6.530e-258
Identity = 383/744 (51.48%), Postives = 521/744 (70.03%), Query Frame = 0
Query:    6 IDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPN-DLVTVGLASRRHLCVHESVS-RMEGSAVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQPS 746
            I+GL V FPY  +Y EQY+YM ELK AL+  GH LLEMP+GTGKTITLLSLIT++   + A+ S+ K +YCTRTV EM+KV++E++ L   +E+E+G     ++ +GL+SR++LC+H  VS      +VD+GCR LT+SWVR   E N +     C +++ Y+++G +  L PGVY L DLRVYG +R WCPYFLAR  I  AN++VY+Y YLLDPKV+G++S E+  E ++VFDEAHNIDNVCIEALSV+L Q  + GA RNI +LN  I R KE+   RLR EY RL  GL   + N H           G +  LA PVLP DILREAVP +IR+AE FV FL +  ++L +R D + V +E P+ F   +++A  + D+K  +  YDRL SLL+T+ V+   EF  + TV +F+T++ TY + G +++ EPY++      +PVL+L+CLDASLA++ V + F++VVITSGTLSP+D YPR+LNF+  +  SF M++ R C+CP+I+ RGSDQL +SSK++ R      RNYG  L+ +  +VPDG+V FFVSY +M  ++  W E G  L E+ + KL+F+ETQD VE +LA++N++ ACD GRGA+  SVARG+ AEGIDFD  YGR VI+FGVPFQYT S++L ARL +L + +QI+E DFL FDA+RQAAQC GRVIR+K DYG++IFADKR+     R+KLP+WI   L  + L+L    A+  AR FL +MAQPS
Sbjct:    5 IEGLTVYFPYEFIYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSY---QLANPSLAKLIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHPVVSSETSRESVDAGCRKLTASWVRAAAETNPDIET--CSFYQGYEKQGSEQPLPPGVYTLHDLRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDEAHNIDNVCIEALSVNLRQNNLDGASRNIHKLNQIISRFKETDANRLRQEYNRLVEGL-AQQGNLH-----------GSDNWLANPVLPEDILREAVPGNIRRAEHFVAFLQRAVQYLRERLDTDTVVKEGPVSFTTTMSTAAGL-DQKALKFCYDRLHSLLLTLEVTEIDEFLHVQTVCNFLTLVGTYTR-GFSIIIEPYDERMPHIPDPVLQLSCLDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFNPVIIHSFTMTLTRDCLCPMILARGSDQLPVSSKFDMRSDPGVVRNYGRLLLEMVATVPDGVVCFFVSYSYMDGIINSWNEMG-ILQEVMQHKLVFIETQDYVETTLALENFRQACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILNARLEYLRDTFQIKEGDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADKRYNLPNKRNKLPQWIQSQLREEHLNLSTDMAVHIAREFLRRMAQPS 728          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A6P8BT56_PUNGR (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Punica granatum TaxID=22663 RepID=A0A6P8BT56_PUNGR)

HSP 1 Score: 741 bits (1914), Expect = 7.760e-258
Identity = 388/743 (52.22%), Postives = 514/743 (69.18%), Query Frame = 0
Query:    5 DIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEG-SAVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
             I+ + V FPY ++YPEQYSYM ELKRAL+  GH LLEMP+GTGKTI LLSLIT++    S  +S  K +YCTRTV EM+K + E+K L   + + LG    ++ VGL+SR++LCV+  V   E   +VD+GCR LT+SWVR   E N     P C++FE Y+R G   +L PGVY L DLR +G  + WCPYFLARH +  AN++VYSY YLLDPKVAG++S E+  ESV+VFDEAHNIDNVCIEALSV + + T+ GA RN++++   I R K +   RLR EY RL  GL         AQ  D +    G+  LA P LP DIL+EAVP +IR+A+ FV  L +L ++L+ R + + V +E P+ F+  I +   + D+K  +  YDRL SLL+T+ ++   EF P+ T+ DF T++ TY + G +++ EP++D   D  +PVL+L+C DASLA++ V + F+TVVITSGTLSP+D YPR+LNF+  VS SF MS+ R C+CP+++TRGSDQL +S+K++ R      RNYG  L+ +   VPDGIV FFVSY +M ++V  W E G  L EI + KL+F+ETQD VE +LA+ NY+ ACD GRGA+  SVARG+ AEGIDFD  YGR VI+FGVPFQYT S++L ARL +L + +QI+E DFL FDA+RQAAQC GRVIR+K DYG++IFADKR++R   RSKLP WI   L    L+L    A+  AR FL +MAQP
Sbjct:    4 QIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYAL--SKPQSPLKLLYCTRTVHEMEKTLAELKKLHDYQVQHLGPAARILAVGLSSRKNLCVNPRVVSAENRDSVDAGCRKLTASWVRALAEKNPN--VPTCEFFEEYERAGSGAVLPPGVYTLQDLRAFGKLKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSKMEQEIQRFKATDESRLRAEYNRLVEGL---------AQRGDLQ----GDTWLANPALPDDILKEAVPGNIRRADFFVRVLRRLVQYLKGRLETDSVEKEGPVTFVASINNHAGI-DQKTLKFCYDRLHSLLLTLEITDTDEFLPIQTICDFATLVGTYAR-GFSIIIEPFDDRMPDVRDPVLQLSCHDASLAIKPVFDRFQTVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDEIVNSWNETG-ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAVYIAREFLRRMAQP 726          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A9T079_PHYPA (General transcription and DNA repair factor IIH helicase subunit XPD n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9T079_PHYPA)

HSP 1 Score: 741 bits (1913), Expect = 8.640e-258
Identity = 386/743 (51.95%), Postives = 518/743 (69.72%), Query Frame = 0
Query:    6 IDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEGS--AVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
            I+GL V FPY  +YPEQY YM +LKR L+  GH LLEMP+GTGKTITLLSLIT+++    A+ SV K +YCTRTV EM+KV+ E++ L A +E+ LG    ++ +GL+SR++LC+H  VS  EGS  +VD+GCR LT+SWVR     N       C Y+E Y++ G D +L  GVY L DLR +G  ++WCPYFLARH I  AN++VY+Y YLLDPKVAG++S E+  E V+VFDEAHNIDNVCIEALSV++ Q T+ GA RN++Q+   I ++K +   RLR EY RL  GL         AQ  +    AG +  LA P LP DIL+EAVP +IR+AE FV FL +L ++++ R   E V  E P+ F+  + +   + D+K  +  YDRL SLL+T+ V++  EF  + TV DF T++ TY + G  ++ EPY++   +  +PVL+L+CLD+SLA++ V   F++VVITSGTLSP+D YPR+LNF   +S S+ M++ R C+CP+++TRGSDQL +S+K++ R      RNYG  L+ +  +VPDGIV FFVSY +M  +V  W E G  L E+ + KL+F+ETQD VE +LA+ NY+ ACD GRGA+  SVARG+ AEGIDFD  YGR VI++GVPFQYT SR+L+ARL +L E +QI+E+DFL FDA+RQAAQC GRVIR+K DYG++IFADKR+ R   RSKLP WI   L    L+L    ++  AR FL +MAQP
Sbjct:    5 IEGLTVYFPYEFIYPEQYDYMVDLKRTLDARGHCLLEMPTGTGKTITLLSLITSYML---ANPSVGKLIYCTRTVHEMEKVLEELRKLQAYQEKALGKAAKMLALGLSSRKNLCIHPQVSG-EGSRESVDAGCRKLTASWVRSLALDNPN--IELCPYYEGYEKGGADALLPSGVYTLHDLRGFGREKRWCPYFLARHMIQFANVVVYNYQYLLDPKVAGIISKEMEKECVVVFDEAHNIDNVCIEALSVNIRQQTLDGATRNLSQVTQLIEKSKATDANRLRQEYSRLVEGL---------AQRGN---LAGTDTWLANPALPQDILQEAVPGNIRRAEHFVAFLKRLVQYIKNRMITEKVESESPVSFVTALQNQAGI-DQKSLKFCYDRLHSLLLTLEVTNTDEFMYIQTVCDFATLVGTYTR-GFTIIIEPYDERMPNIPDPVLQLSCLDSSLAIKPVFEKFQSVVITSGTLSPIDLYPRLLNFHPVISNSYKMTLTRDCLCPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMVTAVPDGIVCFFVSYSYMDGIVNSWNEMG-ILQEVMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMYGVPFQYTLSRILRARLEYLRETFQIKENDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADKRYNRHDKRSKLPGWILSHLREAHLNLSTDMSVHIAREFLRRMAQP 726          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A176W7P2_MARPO (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W7P2_MARPO)

HSP 1 Score: 741 bits (1912), Expect = 1.450e-257
Identity = 386/750 (51.47%), Postives = 521/750 (69.47%), Query Frame = 0
Query:    6 IDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPN-DLVTVGLASRRHLCVHESVSRMEGS--AVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQPSAAKSR 751
            I+GL V FPY  +YPEQY YM ELKRAL+  GH LLEMP+GTGKTITLLSLIT++         V K VYCTRTV EM+KV++E++ L A +E+E+G     ++ +GL+SR+++CVH  +S  EGS  +VD+GCR LT+SWVR  I          C +FE+Y+++G D +L PGVY L D+R +G  + WCPYFLARH I  AN++VY+Y YLLDPKV+G++S E+  E ++VFDEAHNIDNVCIEALSV++ Q T+ GA RN+ +++  I + K +   RLR EY RL  GL         AQ  +  V    +  LA PVLP DILREAVP +IR+AE FV FL +L ++++ R   E+V  E P+ FL  +   C++ D+K  +  YDRL SLL T+ ++   EF  + ++ DF T++ TY++ G A++ EPY+D   +  +PVL+L+CLDASLA+R V   F++VVITSGTLSP+D YPR+LNF+  +  SF M++ R C+CP+I+TRGSDQL +S+K++ R      RNYG  L+ +  +VPDG+V FFVSY +M  ++  W E G  L E+ + KL+F+ETQD VE +LA+ NY+ ACD GRGA+  SVARG+ AEGIDFD  YGR VI++G+PFQYT SR+L+ARL +L E +QI+E DFL FDA+RQAAQC GRVIR+K DYG++IFADKR+ R   RSKLP WI   L    L+L    ++  AR FL +MAQP   K +
Sbjct:    5 IEGLTVYFPYEFIYPEQYQYMVELKRALDAKGHCLLEMPTGTGKTITLLSLITSY----QLANPVGKLVYCTRTVHEMEKVLDELRRLHAYQEKEIGKEAAKILALGLSSRKNMCVHPEISG-EGSRESVDAGCRKLTASWVR--IAAVDNPNIKTCDFFENYEKKGADALLPPGVYTLHDMRSFGREKGWCPYFLARHMIQFANVVVYNYQYLLDPKVSGIISREMEKECIVVFDEAHNIDNVCIEALSVNIRQQTLEGATRNLGKISQVIEKFKATDANRLREEYNRLVEGL---------AQRGNLPV---ADNWLANPVLPDDILREAVPGNIRRAEHFVAFLKRLVQYIKGRLLTEVVESEGPLSFLNSLNKECSI-DQKALKFCYDRLQSLLTTLEITDTDEFLYIQSICDFATLVGTYQR-GFAIIIEPYDDRMPNIPDPVLQLSCLDASLAIRPVFERFQSVVITSGTLSPIDLYPRLLNFNPVIFKSFTMTLTRDCLCPMILTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMVAAVPDGVVCFFVSYSYMDGIINSWNEMG-ILQEVMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMYGIPFQYTLSRILRARLEYLRETFQIKEGDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADKRYNRHDKRSKLPGWIQTHLRDAHLNLSTDMSLHIAREFLRKMAQPYDKKGQ 732          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A7S3QMW4_DUNTE (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QMW4_DUNTE)

HSP 1 Score: 741 bits (1913), Expect = 1.660e-257
Identity = 383/746 (51.34%), Postives = 524/746 (70.24%), Query Frame = 0
Query:    6 IDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDL--VTVGLASRRHLCVHESVSRMEGS--AVDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKR-ADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
            ++ L V FPY  +YPEQY YM ELKRAL+  GH +LEMP+GTGKTITLLSLIT++   + A   V K VYCTRTV EM+KV+ E+  L+  R R +G  + L  + +GL+SR++LC H +VS  EGS   VD+GCR LT+SW RER    ++     C++FE ++R G + +L PGVY L DLR +G ++ WCPYFLARH +  AN++VY+Y Y++DPKV+ +VS EL  E V+VFDEAHNIDNVCIE+LSV+L   T+  A RN+T+L++AI R KE+   RLR EY+RL  GL      +    PD GRV  GGEE LA P LP D+LRE VP +IR+AE F+ F+ +L  ++ +R      V  E+PI FL  + S  AV D K  +  YDRL SL+ T+ +S+  EF P+  V DF T++ TY + G AV+TEP++  T +  +PV++L+CLDASLA+R V + F++V+ITSGTLSP++ YPR+LNF+     SF+M++ R C+CP+++TRG+DQ+ +S+K+  R  S   RNYG  L+ LA  VPDG+V FFVSY++M  ++  W + G  L EI   KL+F+ETQD VE +LA+ N++ ACDSGRGA+ +SVARG+ AEGIDFD  YGR V++FGVP+QYT SRVL++RL +L + + I+EDD+L FDA+RQAAQC GRVIR+K+DYG+++FADKR+ R+  R KLP WI++ L    L+L     +   R F+  MAQP
Sbjct:    5 LEDLMVYFPYEFIYPEQYRYMLELKRALDARGHCVLEMPTGTGKTITLLSLITSY---QLAHPEVGKLVYCTRTVPEMEKVLAELHELITYRARYIGGSSALPILALGLSSRKNLCCHPTVSE-EGSREGVDAGCRRLTASWTRERAV--SDPNIELCEFFEGHERAGTEALLPPGVYTLADLRAFGRKKGWCPYFLARHMMAFANVVVYNYQYMIDPKVSQMVSRELEKECVVVFDEAHNIDNVCIESLSVNLRLQTLDSASRNLTRLDTAIRRVKETDAGRLRDEYQRLVQGLV-----SQGTLPDPGRV--GGEEWLAHPALPEDVLRETVPGNIRRAEHFITFMRRLITYMRERLGGARQVVLEEPIAFLTSLQSNVAV-DAKTLKFCYDRLSSLMKTLEISNTEEFTPISIVADFATLVGTYAR-GFAVITEPFDSRTPNIPDPVIQLSCLDASLAMRPVFSKFQSVIITSGTLSPIELYPRILNFNPVSIQSFSMTLPRDCICPVVLTRGADQMPMSTKFEMRGDSGVVRNYGRTLVELAAVVPDGLVCFFVSYLYMDSIISKWHDMG-ILQEIMNHKLVFIETQDVVETTLALDNFRRACDSGRGAVFMSVARGKVAEGIDFDRHYGRCVVMFGVPYQYTLSRVLRSRLDYLRDTFHIKEDDYLAFDAVRQAAQCVGRVIRSKSDYGMMVFADKRYQRSDKRDKLPNWITRHLRDAHLNLSTDMLLTVTRDFMRNMAQP 734          
BLAST of Gcaud8397.t1 vs. uniprot
Match: C1MJ87_MICPC (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MJ87_MICPC)

HSP 1 Score: 738 bits (1904), Expect = 1.460e-256
Identity = 386/750 (51.47%), Postives = 519/750 (69.20%), Query Frame = 0
Query:    3 LVDIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEGS--AVDSGCRALTSSWVRER----IEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYND-FTGDYEPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
            + +++GL V FPY  LYPEQY YM+ELKR L+  GH  LEMP+GTGKTIT L+LIT++   + A     K +YCTRTV EM+KV+ E++VL A RE+ +G    ++ +GL+SR+++CVH  V+  EGS  +VD+ CR LT+SWVRE+    +    E T   C++FE Y+REG D +L PGVY L DLR +G  + WCPYF ARH I  +N++VY+Y YLLDPKV+ +VS EL  E V+VFDEAHNIDNVCIEALSV+L Q T+  A RNIT L++ I RAK++   RLR EY  L +GL      A+      G    GGE+ +A PV+P DILREAVP +IR+AE FV F+ +L  +L++R     V QE P+ FL  ++   A+ D K  +  +DRL SLL T+ +    EF  +  V DF T++ TYEK G A++ EPY++ +    +PVL+L+CLDASLA+  V   F  V ITSGTLSP+D YP++L+F+     S  M++ R C+CP+++TRG+DQ A+S+K++ R      +NYG  LI +A SVPDG+V FFVSY +M+Q+V  W E G  L  + + KL+F+ETQD VE SLA+ NY+ AC+ GRGA+ LSVARG+ AEGIDFD  YGRAVI++GVP+QYT SR+L+ARL +L E +QI+E DFL FDA+RQAAQC GRVIR+K DYG+++FADKR+     R KLP WI+  L  + L+L    A+  ARTF+ +MAQP
Sbjct:    2 IFNLEGLTVYFPYEYLYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCLALITSY---QLAHPECGKLIYCTRTVPEMEKVLAELRVLQAYREKHVGEAAAMLALGLSSRKNMCVHPRVAE-EGSRESVDARCRQLTASWVREKHNSALASGEEPTTELCQFFEDYEREGPDAVLPPGVYTLADLRQFGRTKGWCPYFTARHMIKCSNVIVYNYQYLLDPKVSSLVSRELEKECVVVFDEAHNIDNVCIEALSVNLRQQTLDVAGRNITALSAKIERAKQTDERRLRAEYDALVNGL------ANQGVLPRG----GGEDAIANPVIPADILREAVPGNIRRAEHFVAFMRRLVEYLKQRLKATQVEQETPMAFLAHLSQTAAI-DGKTLKFCHDRLTSLLKTLEIVDTEEFNAVSLVADFGTLVGTYEK-GFALILEPYDERYPNIPDPVLQLSCLDASLAIAPVFERFDNVFITSGTLSPIDLYPKLLSFNPVACISLPMTLTRDCLCPIVITRGADQQAVSTKFDMRDDPGVIQNYGRILIDMAASVPDGLVAFFVSYSYMEQIVSKWHETGV-LQNVMQHKLVFIETQDVVETSLALDNYRRACNCGRGAVFLSVARGKVAEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEADFLAFDAVRQAAQCVGRVIRSKADYGLMVFADKRYNSHDKRGKLPGWITTHLKEERLNLSTDMAVHVARTFMREMAQP 734          
BLAST of Gcaud8397.t1 vs. uniprot
Match: A0A1Y1HMG9_KLENI (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMG9_KLENI)

HSP 1 Score: 738 bits (1905), Expect = 1.500e-256
Identity = 376/744 (50.54%), Postives = 521/744 (70.03%), Query Frame = 0
Query:    5 DIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKTITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERELGVPNDLVTVGLASRRHLCVHESVSRMEGSA--VDSGCRALTSSWVRERIEVNAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLARHSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEALSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAELNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLDKLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLLMTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDY-EPVLRLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNMSMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPDGIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQNYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRVLKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQP 745
            +++GL V FPY  LYPEQYSYM E+KRAL+  GH LLEMP+GTGKTITLLSLIT++   + A   + K +YCTRTV EM+KV+ E++ L A +E+ELG    ++ +GL+SR++LC+H ++S  EGS   VD+GCR LT++WVR     N +     C +FE Y+++G D +L  GVY L D++V+G ++ WCPYFLARH I  AN+++Y+Y Y+LDPKVAGV+S EL  E V+VFDEAHNIDNVCIEALSV+L Q T+ GA RN+T+L   + + K +  +RLR EY RL  GL           P +       +++LA P LP DILREAVP +IR+AE F+ FL +  ++L++R   + V  E P+ FL  + ++  + D K  +  YDRL SL++T+ ++   EF  L  V DF T++ TY  +G A++ EP+++      +PV++L+CLD+SLA++ V   F++V+ITSGTLSP++ YPR+LNF+     SF MS+ R C+CP++++RGSDQL +S+K++ R      RNYG  L+ +A +VPDGIV FFVSY +M  ++  W E G  L EI + KL+F+ETQD VE +LA+ NY+ ACD GRGA+  SVARG+ AEGIDFD  YGR VI++GVPFQYT SR+L+ARL +L + +QI+E+DFL FDA+RQAAQC GRVIR+K+DYG++IFADKR+ R   RSKLP WI   L    ++L    A+  AR +L +MAQP
Sbjct:    4 NLEGLTVYFPYEYLYPEQYSYMLEVKRALDAKGHGLLEMPTGTGKTITLLSLITSY---QLAHPDMGKLIYCTRTVHEMEKVLEELRKLQAYQEKELGKQAQILALGLSSRKNLCIHPTISG-EGSRENVDAGCRKLTATWVRSAAAENPD--IELCDFFEGYEKKGADALLPAGVYTLHDMKVFGRQKGWCPYFLARHMITFANVVIYNYQYMLDPKVAGVISRELEKECVVVFDEAHNIDNVCIEALSVNLRQQTLDGAQRNLTKLGQVVEKFKATDADRLRAEYNRLVEGLAQ-----RGTLPQN-------DQMLANPALPDDILREAVPGNIRRAEHFLAFLKRFVQYLKRRMGAQQVESEGPLSFLDDLNNSAGI-DAKTLKFCYDRLHSLMLTLEITDTEEFHHLTLVCDFGTLVGTYT-QGFAIIIEPFDERMPHISDPVMQLSCLDSSLAIKPVFERFQSVIITSGTLSPIELYPRLLNFNPVTIQSFAMSLTRDCLCPMVLSRGSDQLPVSTKFDMRSDPGVVRNYGRLLVEMAQAVPDGIVCFFVSYSYMDAIINSWNEMG-ILKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMYGVPFQYTLSRILRARLEYLRDTFQIKENDFLTFDAIRQAAQCVGRVIRSKSDYGMMIFADKRYQRHDKRSKLPNWILSQLKDSHMNLSTDMALHIAREYLRRMAQP 726          
The following BLAST results are available for this feature:
BLAST of Gcaud8397.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXV1_9FLOR0.000e+085.49General transcription and DNA repair factor IIH he... [more]
R7QGF0_CHOCR0.000e+077.34General transcription and DNA repair factor IIH he... [more]
A0A218W412_PUNGR1.410e-25852.36General transcription and DNA repair factor IIH he... [more]
D8T2U1_SELML6.530e-25851.48General transcription and DNA repair factor IIH he... [more]
A0A6P8BT56_PUNGR7.760e-25852.22General transcription and DNA repair factor IIH he... [more]
A9T079_PHYPA8.640e-25851.95General transcription and DNA repair factor IIH he... [more]
A0A176W7P2_MARPO1.450e-25751.47General transcription and DNA repair factor IIH he... [more]
A0A7S3QMW4_DUNTE1.660e-25751.34General transcription and DNA repair factor IIH he... [more]
C1MJ87_MICPC1.460e-25651.47General transcription and DNA repair factor IIH he... [more]
A0A1Y1HMG9_KLENI1.500e-25650.54General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001945RAD3/XPD familyPRINTSPR00852XRODRMPGMNTDcoord: 349..370
score: 29.22
coord: 654..676
score: 63.98
coord: 725..745
score: 42.86
coord: 420..438
score: 29.32
coord: 509..526
score: 57.94
coord: 9..26
score: 69.05
coord: 389..411
score: 32.92
coord: 324..342
score: 66.92
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 4..751
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 559..704
e-value: 7.6E-61
score: 218.1
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 543..717
e-value: 3.6E-43
score: 147.7
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488deadxpdcoord: 9..289
e-value: 1.5E-89
score: 313.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 517..720
e-value: 4.2E-48
score: 165.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 17..288
e-value: 2.2E-45
score: 156.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 33..697
IPR010643Helical and beta-bridge domainPFAMPF06777HBBcoord: 274..422
e-value: 1.2E-13
score: 51.2
IPR010614DEAD2PFAMPF06733DEAD_2coord: 75..257
e-value: 2.9E-42
score: 144.3
IPR013020ATP-dependent helicase Rad3/Chl1-likeTIGRFAMTIGR00604TIGR00604coord: 9..724
e-value: 7.5E-200
score: 664.0
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 4..751
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 233..242
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 562..765
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..536
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 537..561
NoneNo IPR availableCDDcd18788SF2_C_XPDcoord: 506..702
e-value: 3.17677E-58
score: 193.204
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 8..289
score: 30.82658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1597_length_9575_cov_4.430620contigNODE_1597_length_9575_cov_4.430620:6019..8483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8397.t1Gcaud8397.t1Gracilaria caudata M_176_S67 malemRNANODE_1597_length_9575_cov_4.430620 6019..8483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8397.t1 ID=Gcaud8397.t1|Name=Gcaud8397.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=766bp
MVLVDIDGLQVVFPYPSLYPEQYSYMRELKRALECGGHALLEMPSGTGKT
ITLLSLITAFLSTRSADKSVRKFVYCTRTVEEMQKVMNEMKVLVASRERE
LGVPNDLVTVGLASRRHLCVHESVSRMEGSAVDSGCRALTSSWVRERIEV
NAERTAPFCKYFESYDREGLDHILAPGVYNLVDLRVYGTRRQWCPYFLAR
HSIMMANILVYSYHYLLDPKVAGVVSSELPPESVIVFDEAHNIDNVCIEA
LSVDLEQPTIRGALRNITQLNSAIYRAKESAVERLRGEYRRLSSGLPLAE
LNAHAAQPDDGRVFAGGEEILAAPVLPGDILREAVPDSIRKAEEFVEFLD
KLTRFLEKRADKEIVTQEQPIPFLRQIASACAVEDKKVFRATYDRLISLL
MTVHVSSWSEFKPLLTVGDFITMLSTYEKEGMAVLTEPYNDFTGDYEPVL
RLACLDASLAVRWVMNHFRTVVITSGTLSPLDTYPRMLNFSVTVSASFNM
SMERRCVCPLIMTRGSDQLALSSKYNARQTSDTSRNYGHALIALAGSVPD
GIVVFFVSYVFMQQVVKVWTEEGNFLDEIRRLKLLFVETQDPVEASLAIQ
NYKAACDSGRGAILLSVARGRAAEGIDFDGQYGRAVILFGVPFQYTESRV
LKARLRFLAENYQIQEDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADK
RFTRAKLRSKLPKWISQFLSADFLDLDLGTAIAEARTFLIQMAQPSAAKS
REEEKRPEHYEFLGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001945RAD3/XPD
IPR006555ATP-dep_Helicase_C
IPR006554Helicase-like_DEXD_c2
IPR027417P-loop_NTPase
IPR010643HBB
IPR010614DEAD_2
IPR013020Rad3/Chl1-like
IPR045028DinG/Rad3-like
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3