Gcaud8381.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8381.t1
Unique NameGcaud8381.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length180
Homology
BLAST of Gcaud8381.t1 vs. uniprot
Match: A0A2V3IYG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYG6_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 4.720e-43
Identity = 76/171 (44.44%), Postives = 120/171 (70.18%), Query Frame = 0
Query:    4 KGFLQEMVSDAEWKAVLSDELSEARDVIGCSADEVGDMLVSYSQWLYGKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYFVVSCEASEDDIGSYFDLWTEYESIERMKELFRIYILLMMLDAVYMSYRFYIIAEHGQRVSTYSDLRALMRILLR 174
            +G +Q+M+SD EW +VLS+EL+  R+ +     E  ++ ++Y+++L  +AS Y++P+ +VHGDL   NV  NS +   FIDF +TCISFPFRDAA F + C A+ DD+  YFD+W EYES  R++ELF++   L ++ + ++SY+ YI AE  +R+ST   LR+++R+LL+
Sbjct:  290 EGLVQKMISDTEWCSVLSEELAVTRETLPVDEAEFKNLFITYTRYLSVRASEYSVPLALVHGDLDIVNVTQNSENEINFIDFGATCISFPFRDAATFALMCGATADDLQFYFDMWVEYESAGRIRELFQLVKGLQLVFSAFVSYKQYITAEESKRMSTRLALRSVLRVLLQ 460          
BLAST of Gcaud8381.t1 vs. uniprot
Match: UPI0015631384 (aminoglycoside phosphotransferase family protein n=1 Tax=Paenibacillus qinlingensis TaxID=1837343 RepID=UPI0015631384)

HSP 1 Score: 63.5 bits (153), Expect = 1.340e-8
Identity = 50/169 (29.59%), Postives = 91/169 (53.85%), Query Frame = 0
Query:   19 VLSDELSEARDVIGCSADEVGDM---LVSYSQWLYGKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYFVVSCEASEDDI-----GSYFDLWTEYESIERMKELFRIYILLMMLDAVYMSYRFYIIAEHGQRVSTYSDLRALMRILLRKVLAF 179
            +L DEL  ++     +++E+GD+   L + S+ +  + S Y++P T+VHGDL   NV  +SN R  F D++  C++ PF D    ++  +  +  I      +Y +LWT +ES +R++EL+    L  ++ A+Y +  +  I  H + V +  +L  +    LR VL +
Sbjct:  291 LLDDELVVSK----LTSEEIGDLRRQLPAISE-MCKRISTYDVPSTLVHGDLHMGNVA-SSNGRIIFFDWTDACVAHPFMDM---ILIYQEKDPSIRTRLRDAYLELWTGFESTKRLQELWS---LCEVVHAIYHTVSYQSILRHTE-VRSRGELGRVPSFYLRSVLRY 446          
BLAST of Gcaud8381.t1 vs. uniprot
Match: A0A2V3J0Z8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z8_9FLOR)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-7
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   44 SYSQWLYGKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYFVVS-----CEASEDDIGSYFDLWTEYESIERMKEL 130
            +Y + L+   + Y + + +VHGD+   NVVL  +++ TFID   T +SFPF +     +          E D   Y + W E ES+ER++EL
Sbjct:   28 AYLERLFDNLAEYKVLVAVVHGDVEPVNVVLEGDEKCTFIDMFYTQVSFPFLNVVMLPIKYAHDLSNYKELDFYFYLEYWRECESMERLREL 119          
BLAST of Gcaud8381.t1 vs. uniprot
Match: A0A838RNA4_9CHLR (Aminoglycoside phosphotransferase family protein n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RNA4_9CHLR)

HSP 1 Score: 58.9 bits (141), Expect = 3.560e-7
Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   49 LYGKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYFVVSCEASEDD--IGSYFDLWTEYESIERMKELFRI 133
            L  +AS Y +P ++VHGDL   NV      R+   D++ +CI+ PF D    +   E +  D  +  Y  LWT+YE + R+KEL+ +
Sbjct:  142 LCAEASTYRVPPSLVHGDLHLGNVA-QQEGRYLIFDWTDSCITHPFIDLIDLIYEKEEAVRDRLLDGYLALWTDYEPMARLKELWEL 227          
BLAST of Gcaud8381.t1 vs. uniprot
Match: W4LJC7_9BACT (APH domain-containing protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4LJC7_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 2.440e-6
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0
Query:   32 GCSADEVGDM--LVSYSQWLYGKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYF---VVSCEASEDDIGS-------YFDLWTEYESIERMKELFRI 133
            G S +EV  +  L    + L  K ++Y++P T++HGDL   N+++N  DR+ F D++  CIS PF + A     V+     +D   +       Y + WT YE +ER+ E F +
Sbjct:  308 GLSEEEVEGLHALPMKMKLLCAKLASYDVPHTLIHGDL-GGNILVNG-DRYIFFDWTDVCISHPFFEMATIIDTVLDASIIQDQTDTRTRLRDAYLEPWTAYEPMERLVEAFEL 419          
BLAST of Gcaud8381.t1 vs. uniprot
Match: UPI000CF70807 (phosphotransferase n=1 Tax=Pseudoalteromonas sp. T1lg48 TaxID=2077100 RepID=UPI000CF70807)

HSP 1 Score: 55.8 bits (133), Expect = 4.970e-6
Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   52 KASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYF--VVSCEASEDDIGSYFDLWTEYESIERMKE 129
            K  ++++P T+VHGDL   N+    ND+F F D+S  CIS PF D  Y   +   E  E+ + +Y   W++     R+++
Sbjct:  188 KLESFDLPDTLVHGDLHIENIA-QVNDKFIFFDWSDACISHPFIDGTYIYRMPEGENKEEIVNAYLSQWSDLADYARLRD 266          
The following BLAST results are available for this feature:
BLAST of Gcaud8381.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IYG6_9FLOR4.720e-4344.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI00156313841.340e-829.59aminoglycoside phosphotransferase family protein n... [more]
A0A2V3J0Z8_9FLOR1.040e-733.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A838RNA4_9CHLR3.560e-735.63Aminoglycoside phosphotransferase family protein n... [more]
W4LJC7_9BACT2.440e-632.46APH domain-containing protein n=1 Tax=Candidatus E... [more]
UPI000CF708074.970e-633.75phosphotransferase n=1 Tax=Pseudoalteromonas sp. T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002575Aminoglycoside phosphotransferasePFAMPF01636APHcoord: 57..115
e-value: 2.6E-7
score: 30.7
NoneNo IPR availableGENE3D3.90.1200.10coord: 26..174
e-value: 1.6E-10
score: 43.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..132
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 25..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4885_length_1914_cov_5.322545contigNODE_4885_length_1914_cov_5.322545:2..541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8381.t1Gcaud8381.t1Gracilaria caudata M_176_S67 malemRNANODE_4885_length_1914_cov_5.322545 2..541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8381.t1 ID=Gcaud8381.t1|Name=Gcaud8381.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=180bp
GKLKGFLQEMVSDAEWKAVLSDELSEARDVIGCSADEVGDMLVSYSQWLY
GKASAYNIPMTIVHGDLCAANVVLNSNDRFTFIDFSSTCISFPFRDAAYF
VVSCEASEDDIGSYFDLWTEYESIERMKELFRIYILLMMLDAVYMSYRFY
IIAEHGQRVSTYSDLRALMRILLRKVLAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002575Aminoglycoside_PTrfase
IPR011009Kinase-like_dom_sf