Gcaud8380.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8380.t1
Unique NameGcaud8380.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length281
Homology
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BLAST of Gcaud8380.t1 vs. uniprot
Match: A0A2V3IF96_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF96_9FLOR)

HSP 1 Score: 195 bits (495), Expect = 8.490e-58
Identity = 113/267 (42.32%), Postives = 160/267 (59.93%), Query Frame = 0 
Query:    7 NPRFLLIASAFLFSIACASPM----FTPAQNIVDDIIYGNLEKSSSGFDLKYAPERQITPSIDQAAGIQRSRLGYVQTTGVVTGFTLPASRNIVVRANMSGSVSFEGKLASDIEDETERLLSGYSQELQDFYRREKESLQSRASGGYFFFFQAAANYGYSDDEITRNTLEDGEFRDFRDRASAILASQTTSTLSADFNVQFEGRSEGFAETITVFGYVYINQMTLSSGEIFNIAKKNSELLIADQNGNVRDRETINVERENINDNLL 269
            N  FLL+AS        ASP+      P +NI D +      + +S  DL    +R + P+  Q AGI+RSRLGY+QT+   +GF +P  R I   A++ G+VS  G LASDIED TER+  G    +++FYR EK +LQSRA   YF FFQAA ++G+++D+ TR+TL   ++  F ++    L S    +L++ ++V + G S+G    I  F YV INQ+TLSSG I NI +KN EL++ DQ  NV DR   +VE ENI + +L
Sbjct:    6 NLIFLLVASILSILECFASPLSKKVVKPVENIGDRVFSLQDVELTSVQDLHIVLDRMLAPTTAQVAGIERSRLGYIQTSRAASGF-IPPGRGITFSASLEGNVSMTGSLASDIEDATERIALGEPDRVREFYRTEKRNLQSRAGDNYFHFFQAARDFGFTEDQTTRDTLNSTDYAQFSEKVGVELGSSFLGSLNSRYSVTYSGVSDGNQRVIQAFAYVLINQITLSSGRILNIVQKNPELVVTDQEFNVIDRIENSVEFENIGNQIL 271
The following BLAST results are available for this feature:
BLAST of Gcaud8380.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IF96_9FLOR8.490e-5842.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1026_length_14910_cov_4.896079contigNODE_1026_length_14910_cov_4.896079:12373..13215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8380.t1Gcaud8380.t1Gracilaria caudata M_176_S67 malemRNANODE_1026_length_14910_cov_4.896079 12373..13215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8380.t1 ID=Gcaud8380.t1|Name=Gcaud8380.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=281bp
MTAHAPNPRFLLIASAFLFSIACASPMFTPAQNIVDDIIYGNLEKSSSGF
DLKYAPERQITPSIDQAAGIQRSRLGYVQTTGVVTGFTLPASRNIVVRAN
MSGSVSFEGKLASDIEDETERLLSGYSQELQDFYRREKESLQSRASGGYF
FFFQAAANYGYSDDEITRNTLEDGEFRDFRDRASAILASQTTSTLSADFN
VQFEGRSEGFAETITVFGYVYINQMTLSSGEIFNIAKKNSELLIADQNGN
VRDRETINVERENINDNLLNTELSSGRQIL*
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