Gcaud8368.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8368.t1
Unique NameGcaud8368.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length782
Homology
BLAST of Gcaud8368.t1 vs. uniprot
Match: A0A2V3IW17_9FLOR (Fmp27_GFWDK domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW17_9FLOR)

HSP 1 Score: 756 bits (1953), Expect = 3.470e-246
Identity = 377/552 (68.30%), Postives = 446/552 (80.80%), Query Frame = 0
Query:  209 KRPIADASPYPAIYAALVLRKGTEVNAYLDPRFFTLLRPRRLAILDDLRLSIRARDVSWNAPGIFETSITHIDGELCPGYSRTLRSKLPPSAPATKKPRKPGILRYWEGNGAIHGLSLRIITPLASRSDHDDLAFASVPLSSMSVGGYGTKTHKITAGPENGFFTRVKSIRLEALGKAADERHEPMTRASISIQGCSAGSIAVDALSSTLYETQPIGSDVENSETDERRVESVENIEKIVAARPEFLLWVEDVTTAIDINCSKRHGMRLDFAGHGGVVALEPVGLVQLVNDMRDFGLKYIGRPLRRQSSLSSMSADESPSALPSRSSTSSLYGADGEPRSLRMMSDMRHWTVTILGHEPIGDGDTLALVLSCETMLLPQIDLFGSSFMRFKGSTTKIRLMHWSQWDHTTNFSCEEAKFDISRGIQVGKKVSLKSASIDWDMDAQAGLACLPGLFRELKKLKFSRHTYGLDESDYDENLTASGAAKKQPVVSEEQLRESRSRRRVKLLEELHTWELSGSDIEMVAMFPDGPKMGMSIGKLPSCTLDSEIFCGQ 760
            + P    S YP I+ +LVLRKGTE+NAYLDPR FTLLRPRRLAILDDLR+SIRARDVS  APGIFE S+THIDGELCPGYSRTLR+KLPPSAPATKKPRKPGILRYWEGNGA+HGLS+R   PL +R + ++LAF  + LS +    Y   +  +  GPE G F RV SIR+EA GKAADERHEPMTRAS+S++GCSAGS+AVDALS TLYET    S+ ++ E + RRVES+ENIEKIVAARPEFL+WVEDVTTA+DINCSKRHGMRLDFAGHGGV+ALEPVGLV L ND+R+F  +Y+    RRQ S  S + ++S SA+ SRSSTSSLYGADGEPRSLRMMSDMRHWT+ +LGHEPIG GDTLA+VLSCET+LLPQ+D+FGSSFMRFKGST+ + LMHWSQWD TT+F+CEEAKFDI+RGI VGKKV+L SA+IDWDMDAQ+G+ CLP L RELKKL   + ++  +  D ++N +     + + V SE  L  S S +R +L +EL TWELSGS+I   A FPDGP MG+SIG+LP+ TLDSE FCGQ
Sbjct:    3 RSPAVQESLYPPIHTSLVLRKGTEINAYLDPRLFTLLRPRRLAILDDLRISIRARDVSSFAPGIFEASVTHIDGELCPGYSRTLRAKLPPSAPATKKPRKPGILRYWEGNGAVHGLSIRFTAPLIARGNGNELAFTGLSLSDLKSEVYSQGSQIVAGGPEKGVFLRVSSIRVEAFGKAADERHEPMTRASLSVRGCSAGSVAVDALSRTLYETMSAASNTDSIEFEGRRVESIENIEKIVAARPEFLMWVEDVTTAVDINCSKRHGMRLDFAGHGGVIALEPVGLVLLANDVRNFVSRYLASSHRRQPS--SSTDEDSISAITSRSSTSSLYGADGEPRSLRMMSDMRHWTIAVLGHEPIGAGDTLAMVLSCETLLLPQVDVFGSSFMRFKGSTSNVSLMHWSQWDQTTSFACEEAKFDINRGIHVGKKVALTSATIDWDMDAQSGIECLPDLLRELKKLNVGKSSFHCN--DKEDNFSNDEYPEGEKVRSERGLELSHSEKRKRLFQELQTWELSGSNINFTAFFPDGPGMGVSIGRLPAFTLDSESFCGQ 550          
BLAST of Gcaud8368.t1 vs. uniprot
Match: R7QC25_CHOCR (Fmp27_GFWDK domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC25_CHOCR)

HSP 1 Score: 632 bits (1630), Expect = 5.010e-199
Identity = 336/660 (50.91%), Postives = 437/660 (66.21%), Query Frame = 0
Query:  113 PTPRLNRRWVSLVRFFSLGVAAMDRGYWSTLLRNVLTRVFAFVVRGLRIRVDKVRVWKDGGSWECKAEQFVLEGGAFGVFGSQYTLSVNELYVNVCKRPIADASPYPAIYAALVLRKGTEVNAYLDPRFFTLLRPRRLAILDDLRLSIRARDVSWNAPGIFETSITHIDGELCPGYSRTLRSKLPPSAPATKKPRKPGILRYWEGNGAIHGLSLRIITPLASRSDHDDLAFASVPLSSMSVGGYGTKTHKI--TAGPENGFFTRVKSIRLEALGKAADERHEPMTRASISIQGCSAGSIAVDALSSTLYETQP----IGSDVENSETDERRVESVENIEKIVAARPEFLLWVEDVTTAIDINCSKRHGMRLDFAGHGGVVALEPVGLVQLVNDMRDFGLKYIG-RPLRRQSSLSSMSADESPSALPSRSSTSSLYGADGEPRSLRMMSDMRHWTVTILGHEPIGDGDTLALVLSCETMLLPQIDLFGSSFMRFKGSTTKIRLMHWSQWDHTTNFSCEEAKFDISRGIQVGKKVSLKSASIDWDMDAQAGLACLPGLFRELKKLK----FSRHTYGLDESDYDENL--TASGAAKKQPVVSEEQLRESRSRRRVKLLEELHTWELSGSDIEMVAMFPDGPKMGMSIGKLPSCTLDSEIFCG 759
            P  R+ R   SLV  F  G+AA++R YWSTL RN++TR+FAF++RGLR+RV K R+WKDGGSWECKAE F+L+G A G+FGS+Y+LSVNE Y NVCK P++D+  Y  I A+  LR G EV A+L PRFFTLLRPRR+AI+DDLR+S+  R+VS  AP + + SI+ I  EL PGYSR LR+KLPPSAPATK PRKP ILRYWEGNG + G ++R   P+A +          + L       +  KT ++  T   ENG F R +S+ + A GKAADERHE M  A+I+++GCSAGSIAVDALS  LYE       + S VE S   E  VES E I+KIVAARPE LLW+EDV+ A+DINCSKRH MR+D AG+GGVVA+EP+GLV LV D+  F   YI   P+R + + S+ +  ES ++L   SS SSL  +D E  SLR++SD+RHWT  +LGH PIGDGDT+A+VLS +++ +PQ+D FG +  R  G    + L HWSQW  TTN  C+EA FDI       K +SL    I+WD+D Q+GL  LPGLF  LKKLK      R +   D  D    +  T S    ++  V E + RE R R+  KL+  +  WE++ ++I + A FPDGP +G++ G+LP   L +E + G
Sbjct:   30 PLRRVLRALQSLV--FVAGMAAVERNYWSTLFRNIVTRLFAFIIRGLRVRVVKFRIWKDGGSWECKAEHFILQGRANGIFGSRYSLSVNEFYANVCKAPVSDSHFYTPIEASFKLRHGIEVIAFLTPRFFTLLRPRRMAIMDDLRISLNVREVSCTAPRVLDASISQIAMELTPGYSRGLRAKLPPSAPATKYPRKPSILRYWEGNGEVKGFAIRFTAPVARQLSEASTRLTGMSLPQSVSEAFKPKTSQLKSTEASENGVFARFESVEVTAYGKAADERHEAMAHAAINVRGCSAGSIAVDALSVQLYEATAAHGDMSSKVETSHASEH-VESSEGIDKIVAARPEALLWIEDVSAALDINCSKRHSMRVDIAGNGGVVAIEPLGLVTLVQDLASFASSYISPHPIRPRWTTSTDT--ESTTSLARTSSGSSLQSSDDESTSLRLVSDLRHWTAVVLGHGPIGDGDTMAIVLSSQSIAVPQLDFFGGTSARIHGVVNNVELQHWSQWARTTNLVCKEAMFDIHPNAGQNKAISLTDTCINWDLDVQSGLESLPGLFASLKKLKSLVGMLRISPDSDRDDIAVTMPQTLSRMDLERVHVPESERRERRKRKHQKLMNAMSKWEVNATNISITASFPDGPNIGITAGELPVFCLSAETYVG 684          
The following BLAST results are available for this feature:
BLAST of Gcaud8368.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW17_9FLOR3.470e-24668.30Fmp27_GFWDK domain-containing protein n=1 Tax=Grac... [more]
R7QC25_CHOCR5.010e-19950.91Fmp27_GFWDK domain-containing protein n=1 Tax=Chon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..537
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..781
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_163_length_42078_cov_4.640103contigNODE_163_length_42078_cov_4.640103:28522..30947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8368.t1Gcaud8368.t1Gracilaria caudata M_176_S67 malemRNANODE_163_length_42078_cov_4.640103 28522..30947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8368.t1 ID=Gcaud8368.t1|Name=Gcaud8368.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=782bp
MLFAFAATSADQRIHRIALRLAQWLGGLSISTVIFLFLLFIITIVLRRKG
YGVLLRFFTIIVYARPGARRFPHGCEVRITTRFIGFLISGCRGPWLDISA
ERFYMRMRPSLRPTPRLNRRWVSLVRFFSLGVAAMDRGYWSTLLRNVLTR
VFAFVVRGLRIRVDKVRVWKDGGSWECKAEQFVLEGGAFGVFGSQYTLSV
NELYVNVCKRPIADASPYPAIYAALVLRKGTEVNAYLDPRFFTLLRPRRL
AILDDLRLSIRARDVSWNAPGIFETSITHIDGELCPGYSRTLRSKLPPSA
PATKKPRKPGILRYWEGNGAIHGLSLRIITPLASRSDHDDLAFASVPLSS
MSVGGYGTKTHKITAGPENGFFTRVKSIRLEALGKAADERHEPMTRASIS
IQGCSAGSIAVDALSSTLYETQPIGSDVENSETDERRVESVENIEKIVAA
RPEFLLWVEDVTTAIDINCSKRHGMRLDFAGHGGVVALEPVGLVQLVNDM
RDFGLKYIGRPLRRQSSLSSMSADESPSALPSRSSTSSLYGADGEPRSLR
MMSDMRHWTVTILGHEPIGDGDTLALVLSCETMLLPQIDLFGSSFMRFKG
STTKIRLMHWSQWDHTTNFSCEEAKFDISRGIQVGKKVSLKSASIDWDMD
AQAGLACLPGLFRELKKLKFSRHTYGLDESDYDENLTASGAAKKQPVVSE
EQLRESRSRRRVKLLEELHTWELSGSDIEMVAMFPDGPKMGMSIGKLPSC
TLDSEIFCGQERFGKAANRYRYQKVKPNSVP*
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