Gcaud8262.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8262.t1
Unique NameGcaud8262.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length413
Homology
BLAST of Gcaud8262.t1 vs. uniprot
Match: A0A1X6NL88_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL88_PORUM)

HSP 1 Score: 186 bits (473), Expect = 6.150e-51
Identity = 137/417 (32.85%), Postives = 202/417 (48.44%), Query Frame = 0
Query:    7 PASQLSAPPTNGCLPKQDGVQFCVMIQCGRLAANAVSGNKYLAMTPSSIDHAYATQRGQVVLLHLSAIMYSYWDAAPAGPSVFELASNHLPSDLRQIFREQCASWGTHRLNAPFDEQMYVVEDGEHGSIVADYNMTKFYRVLGMKISPAAALRRRGMELPVASCFTALPFRGHLVYDGLIFGGPNAILSKAKKRTLIERCRAAKSAGTIISGFEVQPSPQRIP--VSEACIQSMNRSQLREFVRQRGGSVSDIAEKSDLVSQALS--LSNKPAQSEGKHAGANKPERTREQQAQVDRL-KKLDKVTGLTLFRRLGYTE------ATNRG---------HVVTVL-NGTSLSGSFHSKDLVPTATEIMDELLKRAESKGSVSKTIAIDDKQTAEAVNLVTKPAGIHTGFYPPPSVEEQ 402
            P   +  PP N  L  +D + F   +    +  N++ G   L  +  ++     TQ G +V+ HL+A+ YS+W+  P GP V  L + HL      + R +  +WGT RLNA   EQM V++D + GS+VAD   T FY V+G+++SPA AL R G  LP  +  TALPFRG LVYDGL+ G P  +   A+   L     AA +AGT+I+G     S       V    + +M+  QL+  +   G S S   +K  LV+   +  L+    +++     AN     R+   + D    +   V  L LF R   T       A + G         H V V   G +   SF     VPT  E+++ LL        V + +++D++  A AV  VT+ AG+ T +YPPPSVEE+
Sbjct:    5 PIRLIGGPPRNALLSDRDAMDFRSNMDTAVVVVNSMIGRYPLVFSIGALRVIRQTQDGLLVVPHLTAVAYSFWEVGPTGPGVGALTACHLVPPFDAVCRAESGAWGTTRLNAKPGEQMTVLKDTDRGSVVADAAGTTFYLVVGLRVSPATALTRAGFTLPFQTRLTALPFRGVLVYDGLVSGRPVPVRG-AQAARLEAAYEAALAAGTVITGLIPSASAPXXXXXVRTDDLHAMSVPQLKAHLTAMGVSASHSFDKVTLVTMVAAERLTAAARRADTGEGSANAEGSMRQPVDEADLSPSEAAAVARLRLFPRRNKTAVIFKQVALHSGDDVAHPAAPHTVAVFFGGAAPLFSFSGAAPVPTTAELLEHLLDAVNRCRFVPELVSVDNRAAAAAVERVTRHAGVQTTYYPPPSVEER 420          
BLAST of Gcaud8262.t1 vs. uniprot
Match: A0A7S0XT14_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XT14_HEMAN)

HSP 1 Score: 112 bits (281), Expect = 1.690e-23
Identity = 114/422 (27.01%), Postives = 168/422 (39.81%), Query Frame = 0
Query:   17 NGCLPKQDGVQFCVMIQCGRLAANAVSGNKYLAMTPSSIDHAYATQ---RGQVVLLHLSAIMYSYWDAAPAG------PSVFEL-----------------ASNHLPSDLRQ----IFREQCASWG---THRLNAPFDEQMYVVEDGEHGSIVADYNMTKFYRVLGMKISPAAALRRRGMELPVASCFTALPFRGHLVYDGLIFG--GPNAILSKAKKRTLIERCRAAKSAGTIISGFE-VQPSPQRIPVSEACIQSMNRSQLREFVRQRGGSVSDIAEKSDLVSQALSLSNKPAQSEGKHAGANKPERTREQQAQVDRLKKLDKVTGLTLFRRLGYTEATNRGHVVTVLNGTSLS-GSFHSKDLVPTATEIMDELLKRAESKGSVSKTIAIDDKQTAEAVNLVTKPAGIHTGFYPPPSVEE 401
            +G L + +G  F  M+   R   N + G   LA     ++H +A +   +GQ +LL L+  MY+YW +   G      P + E                  A   +P  LR     +  +    WG     R  A      +  +D   G ++ D      Y  LG+  +  A L R GM LPV    T LPFRG +VYDGL+ G  GP      ++   ++     A+S G ++S    V P  +   ++ A            F R+  G     AE S+   + + LSNK                T++    +  L K+    G  + RR  YTEA N  H+V  L+GT  + G F S  L PTA E++  L K A+    V    A D       V    +  G+   +Y P  VEE
Sbjct:  126 DGVLVRMEGGTFNTMLDTARFMVNHIHGYT-LAPMVQEMEHIHALRGSPQGQAILLGLTTKMYTYWTSDLPGFAGGVFPMIQETCDTSCATHKAKAPPGADAEEAIPLQLRNWSSAMKEDDVGRWGQKAARRYGA-----FWATKDTPEGMLLLDERDGAVYCALGIAETLKAPLVRMGMTLPVKIKLTLLPFRGRIVYDGLMAGENGPPEQAKGSRAAEILAAVEEAESNGAVVSNISAVGPLHEDYGIAAA------------FARKAAGD----AEASEEAEEKVPLSNK----------------TKKAVKGIKDLPKMPMPGGYWVARRFAYTEAENPNHMVIFLSGTGHTLGGFQSAALEPTAEELLCNLAKTAKVAKCVPTAFAHDSAPAMAGVRQALRGFGVRADYYVPAPVEE 509          
BLAST of Gcaud8262.t1 vs. uniprot
Match: A0A7S3YES2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YES2_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 4.530e-6
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0
Query:  308 GLTLFRRLGYTEATNRGHVVTVLN--GTSLSGSFHSKDLVPTATEIMDELLKR--------------AESKGSVSKTIAIDDKQTAEAVNLVTKPAGIHTGFYPPPSVEE 401
            G  +FRR GY+EA N GH+VT++N  G  +     ++ L PT  E +D L+K               A   G     +A+D +     +     PAGI   +YPPP+ EE
Sbjct:    3 GHWVFRRHGYSEAENPGHLVTLINQAGDPILMGERTRGLAPTPREYLDLLVKAVFDGSPGIPGMLPPAPPTGRAPAAVAVDAQGAVAPLRDFLLPAGIGVSYYPPPTQEE 112          
The following BLAST results are available for this feature:
BLAST of Gcaud8262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1X6NL88_PORUM6.150e-5132.85Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XT14_HEMAN1.690e-2327.01Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S3YES2_HETAK4.530e-632.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_926_length_16078_cov_4.480515contigNODE_926_length_16078_cov_4.480515:8383..9621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8262.t1Gcaud8262.t1Gracilaria caudata M_176_S67 malemRNANODE_926_length_16078_cov_4.480515 8383..9621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8262.t1 ID=Gcaud8262.t1|Name=Gcaud8262.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=413bp
MAPPSNPASQLSAPPTNGCLPKQDGVQFCVMIQCGRLAANAVSGNKYLAM
TPSSIDHAYATQRGQVVLLHLSAIMYSYWDAAPAGPSVFELASNHLPSDL
RQIFREQCASWGTHRLNAPFDEQMYVVEDGEHGSIVADYNMTKFYRVLGM
KISPAAALRRRGMELPVASCFTALPFRGHLVYDGLIFGGPNAILSKAKKR
TLIERCRAAKSAGTIISGFEVQPSPQRIPVSEACIQSMNRSQLREFVRQR
GGSVSDIAEKSDLVSQALSLSNKPAQSEGKHAGANKPERTREQQAQVDRL
KKLDKVTGLTLFRRLGYTEATNRGHVVTVLNGTSLSGSFHSKDLVPTATE
IMDELLKRAESKGSVSKTIAIDDKQTAEAVNLVTKPAGIHTGFYPPPSVE
EQTFSIMMSGAV*
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