Gcaud8258.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8258.t1
Unique NameGcaud8258.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length875
Homology
BLAST of Gcaud8258.t1 vs. uniprot
Match: A0A2V3IVA9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA9_9FLOR)

HSP 1 Score: 476 bits (1226), Expect = 4.810e-151
Identity = 352/951 (37.01%), Postives = 515/951 (54.15%), Query Frame = 0
Query:    1 MQPLTSESEVDPTPPAALLPPLYLNSARIRRIYESLRDDTIPLTPPSSTATTPTXXXXXXXVHEPQLDPPDV--PNTCDIEVAPPSDEQLGLPSAVNAALDDVPDAIKPLVLALWKAPDVAVLHGYSRSQAATALAHALNLHRAAGAARAVLVVPRIASAAKVWQQQLSASLDEVKVTTLRSVRAPRTTCLNSLRMEQYPGVVILADKSLKDPSCWNEVRQALRENRVVNAWDIVISEIRGGDSTLNLYHSPFRLVSDKQARSGMFVMCSDDVARVHKEQFSKHAVRDFVRTQLPSLSSLSEESIWITPASI---GNSASAAKKPTTPKPKSKWKQNQKARSQQLEDLRRKADAFVSELKNTPPTYRQIPSRLSDGELVRSPEVDHTPQLMTRTKR-----VPRSLSVPMNTSRTQ---KRAAAGRVPLQE-NRKPTIVKGEPQRRDGFQEIRRASPSQDVSTMRSNVSRTRRRS------------SLQDVQSRRPYDRRSISIVDLSDDDESDVEWHTPPSQVVAPPFFSDDYNRSDDSSDEYEWKTAIASRRRSRRSVSRSAASRTKSRIARLSSERMQRSGEHRDAEFTPPSRLLRRSPCVLDEGLES-PDTVPSTKVHDSEFSALGASAGSGRTGSGSR-KVVRRRRASNERPLGRRRGPRRSVSAENLV----------------DMEETSTPASSPIGTTRRHSSSRSYFASSRRDDVFGTSVRRNMPFVEIPDSDIEVIDVDPEVIDLCSDDDD-----------------------------SGHDGISPARGVD---SERRR--RVSLERTNMRTASFESNDEGELSYGSSLILTGVTKYNPQPDSLPKPERQKYNRWLGMARKAEARGPEGYEAAIKLYTKCLNVCDGDDHLTNRILSLTSETGLLSNKDFCEGRITSVISKRARPLRRRLRRICSSDSS 873
            MQP++S+SE+D  P    LP LYL S  +R  Y++ +DD   +TPP S + +P            + DP  +  P T  +++APPSDEQLGLPSA++ A+D +P   + L LA+++AP +A++  + R++ ATA+AH LN+ RA G ARAVL+V R A+ A+ WQQQLS SLDEV+VT  R+ RA R   LNSLR EQ+PGV+I++D+ L++   WN +  AL++NRVV  W +V+SEIRG D+ LNLYHSPFR+V+D+QA +G+ VMCSDDVAR  KEQ SK AV  FVR+QLPS+SS + +++W+TP SI    N+  A   PT    KS      ++ S         A   +S +++     R+ P R S  +          P   TRT+R     +PR+ SVP  T +TQ   K   A ++  ++ N      +   +  +  Q        +  S +RSN   T +RS            S +D  S R  DRRS SI+D+SDD +S  EW TPPS+V+  P       +++ SSDE  W+T   SR+++R + SR+ +   + R+ R    R+ R+  H D +    + +  R+  + +  ++S P +VP  +   +  +       +   GS +R  + RRRRASNE         R   + EN+                 D  + S  +S PIGT +  + +++            T  RRN+ F++IPDSD+EVI        LCSD+++                             S + G     G D   S++RR    S +R   R++S E   E +     SLIL+GV K NPQ  SL + +R+++N+WL  AR AEARGPEGY  AI+LY+KCL +CD +D+LT+RILSL+ ET +LS+KDF     +S I+K+    + R RR  S  SS
Sbjct:    1 MQPISSDSELDLNPAPPFLPRLYLQSEDVRNAYDAFQDD---VTPPLSRSASPCASESELPSEPRESDPTRMIPPQTQSLDIAPPSDEQLGLPSALSVAIDQIPPPSRLLTLAMYQAPCLALVSRFPRTKVATAVAHTLNMRRALGGARAVLLVARTAATARQWQQQLSISLDEVRVTVFRTARAARDATLNSLRTEQFPGVIIVSDRVLRNIQLWNGMCAALKQNRVVPRWQLVVSEIRGNDAALNLYHSPFRMVADQQADAGLMVMCSDDVARARKEQVSKEAVNSFVRSQLPSMSSTNPDAMWLTPESILLTKNTKEAIVSPT----KSPISNAPESNS---------AHETISPMRDVDNKARRKPRRRSKDQTRAQQRDQQPPPNRTRTQRPSIRLMPRTASVPQYTRQTQEDVKMTDASQLQKEQANLNSRTTRTNTEALNSIQSQEEGVKRRLRSNLRSNRQNTSKRSPVPQNHSVLCRSSSRDRVSVRSLDRRSFSIIDVSDDSDSADEWFTPPSKVITTPT-----GKANLSSDEDNWRTPFTSRKQTRTASSRTNSRHGQERLNR----RLLRNAVH-DRDHDEDTSMFSRNGRIDNSNIDSDPLSVPVKRRLATTRTKTPPQRTALDKGSTTRGNISRRRRASNEPRPATSSHVRPLANVENITLPPQVRGKKLTRGAIPDATQQSPSSSPPIGTPQTLARNKT-----------PTGNRRNISFIQIPDSDVEVIXXXXXXXXLCSDEEEIASGAPRERSQERLRRVNRTASHRLSPHNSNNTGTLVRNGRDQHQSDQRRLQEASNQRARARSSSVEFVYECD---NQSLILSGVLKLNPQTRSLTEDQRRQFNKWLRKARAAEARGPEGYSVAIRLYSKCLGLCDRNDYLTSRILSLSQETRVLSSKDFTHHGSSSRIAKKPHSPQNRRRRPISDSSS 911          
The following BLAST results are available for this feature:
BLAST of Gcaud8258.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVA9_9FLOR4.810e-15137.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 717..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 646..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..645

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1520_length_9983_cov_4.292357contigNODE_1520_length_9983_cov_4.292357:4315..6939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8258.t1Gcaud8258.t1Gracilaria caudata M_176_S67 malemRNANODE_1520_length_9983_cov_4.292357 4315..6939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8258.t1 ID=Gcaud8258.t1|Name=Gcaud8258.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=875bp
MQPLTSESEVDPTPPAALLPPLYLNSARIRRIYESLRDDTIPLTPPSSTA
TTPTPSPPPSPVHEPQLDPPDVPNTCDIEVAPPSDEQLGLPSAVNAALDD
VPDAIKPLVLALWKAPDVAVLHGYSRSQAATALAHALNLHRAAGAARAVL
VVPRIASAAKVWQQQLSASLDEVKVTTLRSVRAPRTTCLNSLRMEQYPGV
VILADKSLKDPSCWNEVRQALRENRVVNAWDIVISEIRGGDSTLNLYHSP
FRLVSDKQARSGMFVMCSDDVARVHKEQFSKHAVRDFVRTQLPSLSSLSE
ESIWITPASIGNSASAAKKPTTPKPKSKWKQNQKARSQQLEDLRRKADAF
VSELKNTPPTYRQIPSRLSDGELVRSPEVDHTPQLMTRTKRVPRSLSVPM
NTSRTQKRAAAGRVPLQENRKPTIVKGEPQRRDGFQEIRRASPSQDVSTM
RSNVSRTRRRSSLQDVQSRRPYDRRSISIVDLSDDDESDVEWHTPPSQVV
APPFFSDDYNRSDDSSDEYEWKTAIASRRRSRRSVSRSAASRTKSRIARL
SSERMQRSGEHRDAEFTPPSRLLRRSPCVLDEGLESPDTVPSTKVHDSEF
SALGASAGSGRTGSGSRKVVRRRRASNERPLGRRRGPRRSVSAENLVDME
ETSTPASSPIGTTRRHSSSRSYFASSRRDDVFGTSVRRNMPFVEIPDSDI
EVIDVDPEVIDLCSDDDDSGHDGISPARGVDSERRRRVSLERTNMRTASF
ESNDEGELSYGSSLILTGVTKYNPQPDSLPKPERQKYNRWLGMARKAEAR
GPEGYEAAIKLYTKCLNVCDGDDHLTNRILSLTSETGLLSNKDFCEGRIT
SVISKRARPLRRRLRRICSSDSSS*
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