Gcaud8250.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8250.t1
Unique NameGcaud8250.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length141
Homology
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BLAST of Gcaud8250.t1 vs. uniprot
Match: A0A2V3IM60_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM60_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 7.420e-27
Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:   34 VQISLPNTFEVDGDPACVQCSGKGEIDCPVCNATGFFTLNIMDTVSSSQXXXXXXXXXXXXXXXXEIVFKSVLWWDQIPSDEEDPEEKWRDGPDGPRFGWGENPA 138
            +Q  LP+ FE  G+P C QC+G GEI+CPVC+ TGF++L +MDTVSSS XXXXXXXXXXXXXXXX            +PS E+DPEEKWRDG +GPRF WGENPA
Sbjct:   89 LQFPLPSIFENSGNPECEQCAGAGEIECPVCSGTGFYSLTMMDTVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSAEDDPEEKWRDGEEGPRFQWGENPA 193
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BLAST of Gcaud8250.t1 vs. uniprot
Match: A0A7S1TN03_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN03_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 1.730e-9
Identity = 34/80 (42.50%), Postives = 43/80 (53.75%), Query Frame = 0 
Query:   46 GDPA---CVQCSGKGEIDCPVCNATGFFTLNIMDTVSSSQXXXXXXXXXXXXXXXXEIVFKSVLWWDQIPSDEEDPEEKW 122
            G+PA   C QC G G I CPVC+A G FT+ +M TVSS+           XXX     V+ +V WWDQ+  D+  P   W
Sbjct:   93 GEPAEGGCEQCHGAGMIACPVCDAKGVFTVEMMGTVSSTACPMCRGKKKTXXXTCKRDVYTAVKWWDQVDPDDPTPRVTW 172
The following BLAST results are available for this feature:
BLAST of Gcaud8250.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM60_9FLOR7.420e-2763.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TN03_9RHOD1.730e-942.50Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..33
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 43..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_308_length_31041_cov_4.463651contigNODE_308_length_31041_cov_4.463651:28415..28837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8250.t1Gcaud8250.t1Gracilaria caudata M_176_S67 malemRNANODE_308_length_31041_cov_4.463651 28415..28837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8250.t1 ID=Gcaud8250.t1|Name=Gcaud8250.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=141bp
MAEQAKTPSESSSDETKEEGASDSLKQAEHDDDVQISLPNTFEVDGDPAC
VQCSGKGEIDCPVCNATGFFTLNIMDTVSSSQCRMCLGRRIIPCPTCREI
VFKSVLWWDQIPSDEEDPEEKWRDGPDGPRFGWGENPAGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf