Gcaud8248.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8248.t1
Unique NameGcaud8248.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length490
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud8248.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 150..458
e-value: 1.8E-10
score: 41.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..60
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 330..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_308_length_31041_cov_4.463651contigNODE_308_length_31041_cov_4.463651:23544..25013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8248.t1Gcaud8248.t1Gracilaria caudata M_176_S67 malemRNANODE_308_length_31041_cov_4.463651 23544..25013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8248.t1 ID=Gcaud8248.t1|Name=Gcaud8248.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=490bp
MSPFRLNIDRSDNPLGKHQRPLLKAAMPNPPQQKTASITVQDSHPTDKAE
RRRDSTENPSFSKKELVSHTAKLFLSWLTGMVPNRTHLQTSSQIWECVLS
ALNGNDFESARKSMLNLNKHPSNSRTAFVNRRRALSILAVLVAVDEWSAK
TPLSSQNSQLLSAGIAHGSPDAIAFGSWFYLKERWNSSPVPFEEMGLLLV
RAARHGHGACQAVLGIMLSPLSKLSSWYRRKLLTTNELGAEHEHLNRQTS
QPKLHGQAKRKTVQKHDVRRSLETRLNQDVQMLKEAASRGFFLAIDHLER
EAKKRRLNSGKRRNNEYSCLTTREQRVSAQEFFYCVQNAANQQIPYCTVK
LAELLQTGIGCQKNEDDARLWLQTAANLNVPVAMREVHANAKTENQRVTA
TLTKRKSPEREFRERNSFAEEHRANAILKRNFILQQRYEERISRWQEEQE
KRKRVLAFHVIGNLSSKISENMSSAVLQFLFEREKEGWL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf