Gcaud8244.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A2V3IM82_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM82_9FLOR) HSP 1 Score: 306 bits (784), Expect = 3.450e-100 Identity = 148/222 (66.67%), Postives = 181/222 (81.53%), Query Frame = 0
Query: 194 MDTNETNPASFSAASVKQETNIAALGCVDGSIWLTQDCLDGVSEPSETKKRKNVPSISASRVTDGNLCVSGLTWRENEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVIADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAVDVVKGENISVFAAGQTGAVLRLEV 415
MDT+ET PASFSAASVK ++ AALGC+DGS+WL QDCL ++ +KRK V +I ASRVTDG L V+GL WR N+I+SVGWDGFT+VFCA+TC KKTTIPSGGK LT+V ++ +VSA+DGA+RM+DGRSG GVV ACGKR+AH+GIVTDV A E LVVSTG+DG VKFWD+RSLL+PQ T+R+DGKLFAVD+++G +VFAAGQTG VLR +
Sbjct: 1 MDTSETKPASFSAASVKSGSSTAALGCMDGSLWLAQDCLGNTNDAHGDRKRKAVSNIPASRVTDGVLRVTGLLWRANDIVSVGWDGFTSVFCADTCTKKTTIPSGGKPLTSVVSLDGSGCFIVSAVDGAVRMVDGRSGKGVVAACGKREAHQGIVTDVAAQEELVVSTGMDGTVKFWDQRSLLTPQHTIRTDGKLFAVDLIRGTRNTVFAAGQTGKVLRFGI 222
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A2V3IM57_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM57_9FLOR) HSP 1 Score: 256 bits (653), Expect = 5.540e-81 Identity = 120/180 (66.67%), Postives = 153/180 (85.00%), Query Frame = 0
Query: 1 MGGPTATSSSRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLRDDYFLTVSSDETACV 180
M GP A SSS+ +Q+RFK G+E + YK+AHNA+LQVPAH GRKSL+T++HTLLNL EED+PDFHFL+D +PLRTTL+KF+ERRNLSFE+T++LTY+LPI +P+ + D +IS++WISSL A + RVLAGLFSGR SI+H DK+IL ES+F H+APVK V+WL D++FLT SSDETACV
Sbjct: 1 MVGPIAPSSSKTIQIRFKCGIENQTYKSAHNAVLQVPAHLGRKSLKTLLHTLLNLSEEDRPDFHFLVDEVPLRTTLDKFIERRNLSFENTLSLTYFLPIAEPNREPDTSISQNWISSLHAHKDGRVLAGLFSGRSSIVHDDKVILAESSFPHSHEAPVKAVQWLNDNHFLTASSDETACV 180
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A8B7NKS2_HYAAZ (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NKS2_HYAAZ) HSP 1 Score: 98.2 bits (243), Expect = 1.420e-18 Identity = 100/399 (25.06%), Postives = 175/399 (43.86%), Query Frame = 0
Query: 28 AAHNALLQVPAHFGRKSLRTVIHTLL---NLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHD---------KIILNESN-----FSEPHKAPVKDVRWL--RDDYFLTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGS--IWLT--QDCLDGVSEPSETKKRKNV---PSISASRVTDGN--LCVSGLTWRE-NEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI----ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAVD 392
A + + VP L ++ T+L NL +E P F FL+DG+ L L KFLE S + YL L P D + W+++L + ++ G + + I + K++ +++ ++ HKAPVK + W+ ++ F++ D++ +W+++ + V + + S + +V + + A G +G+ IW T +D ++ + E+KK ++ P R T N VSGL W + S WD ++ E + T G A ++ + + + SAMD IR++D RSG+G++ K H + + +E S G D VK WD RS SP + S + K+ A+D
Sbjct: 70 AVPKSSISVPDDTDPTGLNRMLSTMLEQSNL-KESPPVFDFLVDGVMLHGALSKFLEESEASNREGGLVIEYLEQLPPPIPKDALNHDDWVAALHFSQDKLLITGCYDNTIHIWRPNVGDGTKKATKVLSDDTEAHIIKITDAHKAPVKAISWIPKKNHCFVSGGMDQSVRIWQWDAKSNR-VRCVYKCRGHTQSIESLAVAADGELVASGSWEGALKIWTTGDEDIIEAKDDEPESKKSRSTVDPPKNKGPRATLSNHTQSVSGLVWPTLRTLASCSWDNSVRLWDVEA-QQATGHYVGPCACLSLDSSPFNNTIIFSAMDARIRLLDPRSGDGLI--LEKTFQHHKRWANSVKWSPTNEYHFASGGFDNVVKLWDIRSCRSPLFEMLSHEDKVLAID 463
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A433TA76_ELYCH (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433TA76_ELYCH) HSP 1 Score: 87.0 bits (214), Expect = 5.490e-15 Identity = 101/383 (26.37%), Postives = 160/383 (41.78%), Query Frame = 0
Query: 36 VPAHFGRKSLRTVIHTLLNLPEEDKP-DFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLR-------DDYFLTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSIWL----TQDCLDGVSEPSET----KKRKN-----VPSISASRVTDGNLCVSGLTWRENEII-SVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI---ADEMLVVSTGVDGCVKFWDRRSLLSP-QKTVRSDGKLFAVD 392
+P K L ++H++L + +K F FLI+G LR+TLE +LE +++S E + + Y P + + + WISS+ + N +L G + + + D L H PVK V WLR + F + S D++A VWR+ +I + + S + + G D +I L +E SET KK K+ V + V VS W ++ + S WD V+ T ++T I G KA +A + + V ++ D +R+ D R+ G +H G V+ V DE L VS D +K WD RS +P + + K+ AVD
Sbjct: 33 LPISVSPKELNDIVHSVLYEGDGEKTASFDFLINGELLRSTLEVYLEDKDISIESVLEIEYIERQAAPRPEASLS-HDDWISSVRGNNNL-ILCGCYDNTIKLWSRDGQCLTTI---PGHSGPVKCVTWLRSTGDEEDEHLFASGSHDQSAFVWRWKASKKEI-DCLYAFRGHSGSVDCIAANADGERVVTGSWDKTIKLWTADNNSTEQKETEDSETLQQAKKLKSGGHKMVTRVPLLTVGGHKEAVSAAVWLDDSTVCSASWDHTMRVWDM-TRAEQTQIVEGSKAFFQIAHSRLSNLIVSASADRHVRLHDLRTKE----MKGTYTSHAGWVSGVDWSKTDEHLFVSGSHDCLMKLWDTRSPKAPLYNMIGQEEKILAVD 404
BLAST of Gcaud8244.t1 vs. uniprot
Match: R7QIE4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE4_CHOCR) HSP 1 Score: 80.1 bits (196), Expect = 7.580e-15 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0
Query: 315 VVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTD---VIADEMLVVSTGVDGCVKFWDRRSLLSP---QKTVRSDGKLFAVDVVKGENISVFAAGQTGAVLRLEV 415
+VSA+DG +R++D R G GVV ACG++ AHRG+VTD ++A + VS G DG V+ WD R+L++P + V GK AV GE VF+AG G V R V
Sbjct: 2 LVSAVDGGVRLVDAREGKGVVAACGRKGAHRGVVTDACWMVAGKS-AVSGGGDGSVRLWDVRALMTPAHIMERVHEGGKSLAV-AAAGEE--VFSAGADGKVARFRV 104
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A662YDA7_9STRA (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDA7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.110e-10 Identity = 102/417 (24.46%), Postives = 172/417 (41.25%), Query Frame = 0
Query: 10 SRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCR----VLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLRD----DYFLTVSS--DETACVWRFNGDDAQIVSRMD-TNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS-------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI------ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAV 391
SR ++V+F V ++A VP R+ L V++ LL ++ +P F FL+DG+ LRT+LEK+L +S E + L Y + +P + + W+S++ + V+ G + G + + L + H+ +K V D + F+ SS D+ A +WR+ + Q+ T N S A ++ G D ++ W T DG + S K +K+ S + A V G+ V+G+ +R E+ ++S G D ++ T T+ +G +A+T ++ G +G +H+ V+ V + L VS G DG K WD RS + P TV + DGKL A+
Sbjct: 88 SRQIRVKF---VTKDAAIRVTETPFAVPVSLSRRGLSQVVNHLLATGDKPRP-FDFLVDGLFLRTSLEKYLLAHEVSEEALLVLEYVEALPEPQKQSGSDHPD-WVSAVATGSTVSGDELVVTGCYDGVLRVYDVQGTCLASV---KAHQGAIKAVSVSADAGKSEEFVIASSGKDQLAQLWRYTAESPQLTPMAALTGHLN--SVDAVAMHASGQRVVSGSWDNTVRVWQTPSSTDGGEQRSAKKHKKSEGSSAVSFQQLEAEMVLVGHTSYVTGVAFRPTLSEHDEDVVVSAGSDRTVRLWDLTTQSCSQTL-AGNRAVTDLSVNVAGLVXXXXXXXXXXXXXXRAQQSGESVVQRTFHSHKEWVSSVAWHPAHSSHGHLFVSGGYDGAAKVWDARSSV-PLHTVNAHDGKLLAL 492
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A484DTM0_BRELC (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTM0_BRELC) HSP 1 Score: 70.1 bits (170), Expect = 2.080e-9 Identity = 100/414 (24.15%), Postives = 172/414 (41.55%), Query Frame = 0
Query: 14 QVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSG--RVSILHHD-KIILNESNFSEPHKAPVKDVRWL---RDDYFLTVSS--DETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGV-VGACGKRDAHRGIVTDV------IADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAV 391
Q+R K V ++A VP R+ L V++ LL + + +P F FLIDG+ LR++LEK+L+ +S E +TL Y + +P K +++ W+S++ A + V+ G + G RV H D K + + H+ +K V F+ SS D+ A +W++ + ++ + + S A + + G D ++ W T L+ +E S KKRK + + A V G+ C V+ + ++ E ++S G D ++ ++C + G +A++A++ G + C R +H+ V+ V I E L VS G DG K WD RS +GK+ V
Sbjct: 7 QIRVKF-VTKDASIRVTETPFAVPTRLHRRGLSQVVNHLLAVADNSRP-FDFLIDGVFLRSSLEKYLQTHGVSEEALLTLEYVEALPEPQ-KHNQSEHPDWVSAVAAINDDLVVTGCYDGVLRVYDTHGDCKASI------KAHQGAIKAVSVALSHETGEFVISSSGKDQLAQLWKYTAESKRLTP-LAALAGHLNSVDAVQMDSSSKWVVTGSWDNTVRVWQTPHGLETPTEGSLVKKRKTTANGAKTVSFQQLQADIVLVGHTCSVTSVAFQPKVSEHDETVVVSAGSDRTVRLWDLLTQSCSQSLV---GNRAVSALSVNTGGLILTXXXXXXXXXXXXXXXXXXXSIVQCTFR-SHKQWVSSVAWHPDSIQHEHLFVSCGYDGTAKVWDVRSTFPFSTVSAHEGKVLDV 406
BLAST of Gcaud8244.t1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT) HSP 1 Score: 69.7 bits (169), Expect = 2.710e-9 Identity = 93/401 (23.19%), Postives = 170/401 (42.39%), Query Frame = 0
Query: 36 VPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFS-EPHKAPVK--DVRWLRDDYFLTVSS--DETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDG--RSGNGVVGACGKRDAHRGIVTDVI---ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAVDVVKGENISVFAAG 405
VP+ R+ L V++ LL + +P F FLIDG+ LR++L+K+L+ ++S E +TL Y + +P K + + W+S++ + + V+ G + G + + + S + H+ VK V + F+ SS D+ A +WR+ +++ S + + S A + N G D ++ W T + + SE +KK K + A V G+ V+G+ +R E+ ++S G D ++ ++C + +G +A++ + G +SG +V + +H+ V+ V ++E L VS G DG K WD RS + +GK+ + E F G
Sbjct: 28 VPSRLNRRGLSQVVNHLLATGDSPRP-FDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQ-KQNGSDHPDWVSAVASLDDELVVTGCYDGVLRVYDAQ----GDCKASVKAHQGAVKAVSVSSSKSGEFVVASSGKDQLAQLWRYTVKSSKL-SPLAALTGHLNSVDAVQLHASGNRVVTGSWDNTVRVWQTPNGSEDSSEQRSSKKHKKTEDDAGAVSFRQLEAEIVLVGHTSYVTGVAFRPKTSEHDEDVVVSAGSDRSVRLWDLVTQSCSQAL---AGNRAVSDLTVNATGLILTAHPXXXXXXXXPRAQQSGESIVQRTFR--SHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSWRNQEESVAFVTG 416
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A397TTF2_9GLOM (Ribosome biogenesis protein YTM1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TTF2_9GLOM) HSP 1 Score: 69.7 bits (169), Expect = 2.800e-9 Identity = 84/303 (27.72%), Postives = 133/303 (43.89%), Query Frame = 0
Query: 5 TATSSSRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKP-DFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWL---------RDDYF--LTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSIWLTQDCLDGVSEPSE--TKKRKNVPSISASRVT-DGNLC-VSGLTWRENE---IISVGWDGFTNVFCAET 288
T +QVRF + +Q+ Y +A+L VP R L +I+ LL +KP F F+ID LRT+LE++L+ + LS E+ +T+ Y +L P+S + WIS++ L G + V I + L H AP+K V W+ R+++ L+ S D + W+ + D Q D + + S SV A +D SI L +E E +K+RK I A T G++ +S + + +N+ + S GWD V+ ET
Sbjct: 3 TLQEEENQIQVRFVT--QQKEYAVTDSAIL-VPTKLRRYGLSEIINHLLGF---EKPVPFDFMIDNQFLRTSLEEYLQTKELSTENILTIEYVESMLPPTSLSTFQ-HDDWISAVKGYNKSLFLTGSYDNHVRIFNTSGECLQTLL---GHIAPIKSVAWVSVTGKSKNYRNEHAICLSASQDRSIRSWQVSLTDGQYTPLYDC-KGHKESVECISVNSSCTEFASVSLDSSILLWTTIQPEANEEIEKKSKRRKLNKDILAPIATMRGHVGPISSVMFDKNDSNKMYSGGWDHSIRVWDVET 294
BLAST of Gcaud8244.t1 vs. uniprot
Match: G5A136_PHYSP (Ribosome biogenesis protein WDR12 homolog n=4 Tax=Phytophthora TaxID=4783 RepID=G5A136_PHYSP) HSP 1 Score: 65.9 bits (159), Expect = 4.870e-8 Identity = 104/432 (24.07%), Postives = 176/432 (40.74%), Query Frame = 0
Query: 14 QVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFS-EPHKAPVKDVRWL----RDDYFLTVSS--DETACVWRFNGDDAQI--VSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI------ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAV---DVVKGENISVFAAG 405
QVR K V ++A VP R+ L V++ LL ++ +P F FLIDG+ LR++L+KFL+ +S E +TL Y + +P + + W+S++ A V+ G + G + + + S + H+ VK V +D F+ SS D+ A +WRF+ A++ V+ + T N S + G D ++ W + E KK K + A V G+ V+G+ +R E+ ++S G D ++ ++C + G +A++ ++ NG +H+ V+ V ++E L VS G DG K WD RS + P TV + +GKL + + +G+N F G
Sbjct: 7 QVRVKF-VTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATGDKPRP-FDFLIDGLFLRSSLDKFLQTSGVSEEALLTLEYVEALPEPQKQSGSDHPD-WVSAVAALDGDLVVTGCYDGVLRVYDAQ----GDCKASVKAHQGAVKAVSVAPSAEKDGEFVIASSGKDQLAQLWRFSTITAKLAPVAAL-TGHLN--SVDTVQMHASGQRVVTGSWDNTVRVWQAPGASEDAGEQRSAKKHKKTEDGAGAVSFQQLEAEIVLVGHTSYVTGVAFRPKNSEHDEDVVVSAGSDRTVRLWDLVTQSCSQSLV---GNRAVSDLSVSANGLVLXXXXXXXXXXXXXXXXXXXXXIVQRTFRSHKEWVSSVAWHPDSSSNEHLFVSGGYDGTAKVWDARSTI-PLHTVNAHEGKLLDLSWRNQGEGDNNVAFVTG 424 The following BLAST results are available for this feature:
BLAST of Gcaud8244.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8244.t1 ID=Gcaud8244.t1|Name=Gcaud8244.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=416bpback to top |