Gcaud8244.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8244.t1
Unique NameGcaud8244.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length416
Homology
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A2V3IM82_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM82_9FLOR)

HSP 1 Score: 306 bits (784), Expect = 3.450e-100
Identity = 148/222 (66.67%), Postives = 181/222 (81.53%), Query Frame = 0
Query:  194 MDTNETNPASFSAASVKQETNIAALGCVDGSIWLTQDCLDGVSEPSETKKRKNVPSISASRVTDGNLCVSGLTWRENEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVIADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAVDVVKGENISVFAAGQTGAVLRLEV 415
            MDT+ET PASFSAASVK  ++ AALGC+DGS+WL QDCL   ++    +KRK V +I ASRVTDG L V+GL WR N+I+SVGWDGFT+VFCA+TC KKTTIPSGGK LT+V ++      +VSA+DGA+RM+DGRSG GVV ACGKR+AH+GIVTDV A E LVVSTG+DG VKFWD+RSLL+PQ T+R+DGKLFAVD+++G   +VFAAGQTG VLR  +
Sbjct:    1 MDTSETKPASFSAASVKSGSSTAALGCMDGSLWLAQDCLGNTNDAHGDRKRKAVSNIPASRVTDGVLRVTGLLWRANDIVSVGWDGFTSVFCADTCTKKTTIPSGGKPLTSVVSLDGSGCFIVSAVDGAVRMVDGRSGKGVVAACGKREAHQGIVTDVAAQEELVVSTGMDGTVKFWDQRSLLTPQHTIRTDGKLFAVDLIRGTRNTVFAAGQTGKVLRFGI 222          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A2V3IM57_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM57_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 5.540e-81
Identity = 120/180 (66.67%), Postives = 153/180 (85.00%), Query Frame = 0
Query:    1 MGGPTATSSSRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLRDDYFLTVSSDETACV 180
            M GP A SSS+ +Q+RFK G+E + YK+AHNA+LQVPAH GRKSL+T++HTLLNL EED+PDFHFL+D +PLRTTL+KF+ERRNLSFE+T++LTY+LPI +P+ + D +IS++WISSL A  + RVLAGLFSGR SI+H DK+IL ES+F   H+APVK V+WL D++FLT SSDETACV
Sbjct:    1 MVGPIAPSSSKTIQIRFKCGIENQTYKSAHNAVLQVPAHLGRKSLKTLLHTLLNLSEEDRPDFHFLVDEVPLRTTLDKFIERRNLSFENTLSLTYFLPIAEPNREPDTSISQNWISSLHAHKDGRVLAGLFSGRSSIVHDDKVILAESSFPHSHEAPVKAVQWLNDNHFLTASSDETACV 180          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A8B7NKS2_HYAAZ (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NKS2_HYAAZ)

HSP 1 Score: 98.2 bits (243), Expect = 1.420e-18
Identity = 100/399 (25.06%), Postives = 175/399 (43.86%), Query Frame = 0
Query:   28 AAHNALLQVPAHFGRKSLRTVIHTLL---NLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHD---------KIILNESN-----FSEPHKAPVKDVRWL--RDDYFLTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGS--IWLT--QDCLDGVSEPSETKKRKNV---PSISASRVTDGN--LCVSGLTWRE-NEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI----ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAVD 392
            A   + + VP       L  ++ T+L   NL +E  P F FL+DG+ L   L KFLE    S      +  YL  L P    D    + W+++L    +  ++ G +   + I   +         K++ +++       ++ HKAPVK + W+  ++  F++   D++  +W+++    + V  +     +  S  + +V  +  + A G  +G+  IW T  +D ++   +  E+KK ++    P     R T  N    VSGL W     + S  WD    ++  E   + T    G  A  ++ +    +  + SAMD  IR++D RSG+G++    K   H     + +     +E    S G D  VK WD RS  SP   + S + K+ A+D
Sbjct:   70 AVPKSSISVPDDTDPTGLNRMLSTMLEQSNL-KESPPVFDFLVDGVMLHGALSKFLEESEASNREGGLVIEYLEQLPPPIPKDALNHDDWVAALHFSQDKLLITGCYDNTIHIWRPNVGDGTKKATKVLSDDTEAHIIKITDAHKAPVKAISWIPKKNHCFVSGGMDQSVRIWQWDAKSNR-VRCVYKCRGHTQSIESLAVAADGELVASGSWEGALKIWTTGDEDIIEAKDDEPESKKSRSTVDPPKNKGPRATLSNHTQSVSGLVWPTLRTLASCSWDNSVRLWDVEA-QQATGHYVGPCACLSLDSSPFNNTIIFSAMDARIRLLDPRSGDGLI--LEKTFQHHKRWANSVKWSPTNEYHFASGGFDNVVKLWDIRSCRSPLFEMLSHEDKVLAID 463          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A433TA76_ELYCH (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433TA76_ELYCH)

HSP 1 Score: 87.0 bits (214), Expect = 5.490e-15
Identity = 101/383 (26.37%), Postives = 160/383 (41.78%), Query Frame = 0
Query:   36 VPAHFGRKSLRTVIHTLLNLPEEDKP-DFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLR-------DDYFLTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSIWL----TQDCLDGVSEPSET----KKRKN-----VPSISASRVTDGNLCVSGLTWRENEII-SVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI---ADEMLVVSTGVDGCVKFWDRRSLLSP-QKTVRSDGKLFAVD 392
            +P     K L  ++H++L   + +K   F FLI+G  LR+TLE +LE +++S E  + + Y      P  +   +  + WISS+  + N  +L G +   + +   D   L        H  PVK V WLR       +  F + S D++A VWR+     +I   +     +  S    +   +      G  D +I L            +E SET    KK K+     V  +    V      VS   W ++  + S  WD    V+   T  ++T I  G KA   +A  +  +  V ++ D  +R+ D R+        G   +H G V+ V     DE L VS   D  +K WD RS  +P    +  + K+ AVD
Sbjct:   33 LPISVSPKELNDIVHSVLYEGDGEKTASFDFLINGELLRSTLEVYLEDKDISIESVLEIEYIERQAAPRPEASLS-HDDWISSVRGNNNL-ILCGCYDNTIKLWSRDGQCLTTI---PGHSGPVKCVTWLRSTGDEEDEHLFASGSHDQSAFVWRWKASKKEI-DCLYAFRGHSGSVDCIAANADGERVVTGSWDKTIKLWTADNNSTEQKETEDSETLQQAKKLKSGGHKMVTRVPLLTVGGHKEAVSAAVWLDDSTVCSASWDHTMRVWDM-TRAEQTQIVEGSKAFFQIAHSRLSNLIVSASADRHVRLHDLRTKE----MKGTYTSHAGWVSGVDWSKTDEHLFVSGSHDCLMKLWDTRSPKAPLYNMIGQEEKILAVD 404          
BLAST of Gcaud8244.t1 vs. uniprot
Match: R7QIE4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE4_CHOCR)

HSP 1 Score: 80.1 bits (196), Expect = 7.580e-15
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0
Query:  315 VVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTD---VIADEMLVVSTGVDGCVKFWDRRSLLSP---QKTVRSDGKLFAVDVVKGENISVFAAGQTGAVLRLEV 415
            +VSA+DG +R++D R G GVV ACG++ AHRG+VTD   ++A +   VS G DG V+ WD R+L++P    + V   GK  AV    GE   VF+AG  G V R  V
Sbjct:    2 LVSAVDGGVRLVDAREGKGVVAACGRKGAHRGVVTDACWMVAGKS-AVSGGGDGSVRLWDVRALMTPAHIMERVHEGGKSLAV-AAAGEE--VFSAGADGKVARFRV 104          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A662YDA7_9STRA (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDA7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.110e-10
Identity = 102/417 (24.46%), Postives = 172/417 (41.25%), Query Frame = 0
Query:   10 SRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCR----VLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWLRD----DYFLTVSS--DETACVWRFNGDDAQIVSRMD-TNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS-------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVFCAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI------ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAV 391
            SR ++V+F   V ++A          VP    R+ L  V++ LL   ++ +P F FL+DG+ LRT+LEK+L    +S E  + L Y   + +P  +      + W+S++   +       V+ G + G + +       L      + H+  +K V    D    + F+  SS  D+ A +WR+  +  Q+      T   N  S  A ++         G  D ++  W T    DG  + S  K +K+  S       + A  V  G+   V+G+ +R       E+ ++S G D    ++   T     T+ +G +A+T ++    G                    +G         +H+  V+ V       +   L VS G DG  K WD RS + P  TV + DGKL A+
Sbjct:   88 SRQIRVKF---VTKDAAIRVTETPFAVPVSLSRRGLSQVVNHLLATGDKPRP-FDFLVDGLFLRTSLEKYLLAHEVSEEALLVLEYVEALPEPQKQSGSDHPD-WVSAVATGSTVSGDELVVTGCYDGVLRVYDVQGTCLASV---KAHQGAIKAVSVSADAGKSEEFVIASSGKDQLAQLWRYTAESPQLTPMAALTGHLN--SVDAVAMHASGQRVVSGSWDNTVRVWQTPSSTDGGEQRSAKKHKKSEGSSAVSFQQLEAEMVLVGHTSYVTGVAFRPTLSEHDEDVVVSAGSDRTVRLWDLTTQSCSQTL-AGNRAVTDLSVNVAGLVXXXXXXXXXXXXXXRAQQSGESVVQRTFHSHKEWVSSVAWHPAHSSHGHLFVSGGYDGAAKVWDARSSV-PLHTVNAHDGKLLAL 492          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A484DTM0_BRELC (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTM0_BRELC)

HSP 1 Score: 70.1 bits (170), Expect = 2.080e-9
Identity = 100/414 (24.15%), Postives = 172/414 (41.55%), Query Frame = 0
Query:   14 QVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSG--RVSILHHD-KIILNESNFSEPHKAPVKDVRWL---RDDYFLTVSS--DETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGV-VGACGKRDAHRGIVTDV------IADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAV 391
            Q+R K  V ++A          VP    R+ L  V++ LL + +  +P F FLIDG+ LR++LEK+L+   +S E  +TL Y   + +P  K +++    W+S++ A  +  V+ G + G  RV   H D K  +      + H+  +K V          F+  SS  D+ A +W++  +  ++   +     +  S  A  +   +     G  D ++  W T   L+  +E S  KKRK   +         + A  V  G+ C V+ + ++       E  ++S G D    ++    ++C +      G +A++A++    G                        +  C  R +H+  V+ V      I  E L VS G DG  K WD RS          +GK+  V
Sbjct:    7 QIRVKF-VTKDASIRVTETPFAVPTRLHRRGLSQVVNHLLAVADNSRP-FDFLIDGVFLRSSLEKYLQTHGVSEEALLTLEYVEALPEPQ-KHNQSEHPDWVSAVAAINDDLVVTGCYDGVLRVYDTHGDCKASI------KAHQGAIKAVSVALSHETGEFVISSSGKDQLAQLWKYTAESKRLTP-LAALAGHLNSVDAVQMDSSSKWVVTGSWDNTVRVWQTPHGLETPTEGSLVKKRKTTANGAKTVSFQQLQADIVLVGHTCSVTSVAFQPKVSEHDETVVVSAGSDRTVRLWDLLTQSCSQSLV---GNRAVSALSVNTGGLILTXXXXXXXXXXXXXXXXXXXSIVQCTFR-SHKQWVSSVAWHPDSIQHEHLFVSCGYDGTAKVWDVRSTFPFSTVSAHEGKVLDV 406          
BLAST of Gcaud8244.t1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 69.7 bits (169), Expect = 2.710e-9
Identity = 93/401 (23.19%), Postives = 170/401 (42.39%), Query Frame = 0
Query:   36 VPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFS-EPHKAPVK--DVRWLRDDYFLTVSS--DETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDG--RSGNGVVGACGKRDAHRGIVTDVI---ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAVDVVKGENISVFAAG 405
            VP+   R+ L  V++ LL   +  +P F FLIDG+ LR++L+K+L+  ++S E  +TL Y   + +P  K + +    W+S++ +  +  V+ G + G + +         +   S + H+  VK   V   +   F+  SS  D+ A +WR+    +++ S +     +  S  A  +    N    G  D ++  W T +  +  SE   +KK K             + A  V  G+   V+G+ +R       E+ ++S G D    ++    ++C +     +G +A++ +     G                   +SG  +V    +  +H+  V+ V    ++E L VS G DG  K WD RS +        +GK+  +     E    F  G
Sbjct:   28 VPSRLNRRGLSQVVNHLLATGDSPRP-FDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQ-KQNGSDHPDWVSAVASLDDELVVTGCYDGVLRVYDAQ----GDCKASVKAHQGAVKAVSVSSSKSGEFVVASSGKDQLAQLWRYTVKSSKL-SPLAALTGHLNSVDAVQLHASGNRVVTGSWDNTVRVWQTPNGSEDSSEQRSSKKHKKTEDDAGAVSFRQLEAEIVLVGHTSYVTGVAFRPKTSEHDEDVVVSAGSDRSVRLWDLVTQSCSQAL---AGNRAVSDLTVNATGLILTAHPXXXXXXXXPRAQQSGESIVQRTFR--SHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSWRNQEESVAFVTG 416          
BLAST of Gcaud8244.t1 vs. uniprot
Match: A0A397TTF2_9GLOM (Ribosome biogenesis protein YTM1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TTF2_9GLOM)

HSP 1 Score: 69.7 bits (169), Expect = 2.800e-9
Identity = 84/303 (27.72%), Postives = 133/303 (43.89%), Query Frame = 0
Query:    5 TATSSSRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKP-DFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFSEPHKAPVKDVRWL---------RDDYF--LTVSSDETACVWRFNGDDAQIVSRMDTNETNPASFSAASVKQETNIAALGCVDGSIWLTQDCLDGVSEPSE--TKKRKNVPSISASRVT-DGNLC-VSGLTWRENE---IISVGWDGFTNVFCAET 288
            T       +QVRF +  +Q+ Y    +A+L VP    R  L  +I+ LL     +KP  F F+ID   LRT+LE++L+ + LS E+ +T+ Y   +L P+S       + WIS++        L G +   V I +     L        H AP+K V W+         R+++   L+ S D +   W+ +  D Q     D  + +  S    SV       A   +D SI L        +E  E  +K+RK    I A   T  G++  +S + + +N+   + S GWD    V+  ET
Sbjct:    3 TLQEEENQIQVRFVT--QQKEYAVTDSAIL-VPTKLRRYGLSEIINHLLGF---EKPVPFDFMIDNQFLRTSLEEYLQTKELSTENILTIEYVESMLPPTSLSTFQ-HDDWISAVKGYNKSLFLTGSYDNHVRIFNTSGECLQTLL---GHIAPIKSVAWVSVTGKSKNYRNEHAICLSASQDRSIRSWQVSLTDGQYTPLYDC-KGHKESVECISVNSSCTEFASVSLDSSILLWTTIQPEANEEIEKKSKRRKLNKDILAPIATMRGHVGPISSVMFDKNDSNKMYSGGWDHSIRVWDVET 294          
BLAST of Gcaud8244.t1 vs. uniprot
Match: G5A136_PHYSP (Ribosome biogenesis protein WDR12 homolog n=4 Tax=Phytophthora TaxID=4783 RepID=G5A136_PHYSP)

HSP 1 Score: 65.9 bits (159), Expect = 4.870e-8
Identity = 104/432 (24.07%), Postives = 176/432 (40.74%), Query Frame = 0
Query:   14 QVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIHTLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPILDPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNFS-EPHKAPVKDVRWL----RDDYFLTVSS--DETACVWRFNGDDAQI--VSRMDTNETNPASFSAASVKQETNIAALGCVDGSI--WLTQDCLDGVSEPSETKKRKNVPS---------ISASRVTDGNLC-VSGLTWR-------ENEIISVGWDGFTNVF--CAETCMKKTTIPSGGKALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTDVI------ADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRS-DGKLFAV---DVVKGENISVFAAG 405
            QVR K  V ++A          VP    R+ L  V++ LL   ++ +P F FLIDG+ LR++L+KFL+   +S E  +TL Y   + +P  +      + W+S++ A     V+ G + G + +         +   S + H+  VK V       +D  F+  SS  D+ A +WRF+   A++  V+ + T   N  S     +         G  D ++  W      +   E    KK K             + A  V  G+   V+G+ +R       E+ ++S G D    ++    ++C +      G +A++ ++   NG                               +H+  V+ V       ++E L VS G DG  K WD RS + P  TV + +GKL  +   +  +G+N   F  G
Sbjct:    7 QVRVKF-VTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATGDKPRP-FDFLIDGLFLRSSLDKFLQTSGVSEEALLTLEYVEALPEPQKQSGSDHPD-WVSAVAALDGDLVVTGCYDGVLRVYDAQ----GDCKASVKAHQGAVKAVSVAPSAEKDGEFVIASSGKDQLAQLWRFSTITAKLAPVAAL-TGHLN--SVDTVQMHASGQRVVTGSWDNTVRVWQAPGASEDAGEQRSAKKHKKTEDGAGAVSFQQLEAEIVLVGHTSYVTGVAFRPKNSEHDEDVVVSAGSDRTVRLWDLVTQSCSQSLV---GNRAVSDLSVSANGLVLXXXXXXXXXXXXXXXXXXXXXIVQRTFRSHKEWVSSVAWHPDSSSNEHLFVSGGYDGTAKVWDARSTI-PLHTVNAHEGKLLDLSWRNQGEGDNNVAFVTG 424          
The following BLAST results are available for this feature:
BLAST of Gcaud8244.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3IM82_9FLOR3.450e-10066.67Ribosome biogenesis protein WDR12-like n=1 Tax=Gra... [more]
A0A2V3IM57_9FLOR5.540e-8166.67Ribosome biogenesis protein WDR12-like n=1 Tax=Gra... [more]
A0A8B7NKS2_HYAAZ1.420e-1825.06Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
A0A433TA76_ELYCH5.490e-1526.37Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
R7QIE4_CHOCR7.580e-1545.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A662YDA7_9STRA6.110e-1024.46Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
A0A484DTM0_BRELC2.080e-924.15Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT2.710e-923.19Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]
A0A397TTF2_9GLOM2.800e-927.72Ribosome biogenesis protein YTM1 n=2 Tax=Gigaspora... [more]
G5A136_PHYSP4.870e-824.07Ribosome biogenesis protein WDR12 homolog n=4 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 288..327
e-value: 5.9
score: 12.2
coord: 334..371
e-value: 2.7
score: 14.3
coord: 144..182
e-value: 0.2
score: 20.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 102..256
e-value: 9.6E-10
score: 39.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 257..413
e-value: 2.4E-11
score: 45.2
IPR012972NLEPFAMPF08154NLEcoord: 13..80
e-value: 2.5E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 34..385
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 112..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_308_length_31041_cov_4.463651contigNODE_308_length_31041_cov_4.463651:14012..15259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8244.t1Gcaud8244.t1Gracilaria caudata M_176_S67 malemRNANODE_308_length_31041_cov_4.463651 14012..15259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8244.t1 ID=Gcaud8244.t1|Name=Gcaud8244.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=416bp
MGGPTATSSSRALQVRFKSGVEQEAYKAAHNALLQVPAHFGRKSLRTVIH
TLLNLPEEDKPDFHFLIDGIPLRTTLEKFLERRNLSFEHTITLTYYLPIL
DPSSKGDKTISESWISSLDADANCRVLAGLFSGRVSILHHDKIILNESNF
SEPHKAPVKDVRWLRDDYFLTVSSDETACVWRFNGDDAQIVSRMDTNETN
PASFSAASVKQETNIAALGCVDGSIWLTQDCLDGVSEPSETKKRKNVPSI
SASRVTDGNLCVSGLTWRENEIISVGWDGFTNVFCAETCMKKTTIPSGGK
ALTAVATVQNGDFCVVSAMDGAIRMIDGRSGNGVVGACGKRDAHRGIVTD
VIADEMLVVSTGVDGCVKFWDRRSLLSPQKTVRSDGKLFAVDVVKGENIS
VFAAGQTGAVLRLEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR012972NLE
IPR036322WD40_repeat_dom_sf