Gcaud8106.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8106.t1
Unique NameGcaud8106.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length524
Homology
BLAST of Gcaud8106.t1 vs. uniprot
Match: A0A2V3IQ92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ92_9FLOR)

HSP 1 Score: 342 bits (876), Expect = 1.160e-107
Identity = 190/511 (37.18%), Postives = 297/511 (58.12%), Query Frame = 0
Query:   31 NAECMPRNLSNSQRNGRGCLARLATHLKDYEICADA-SNTTCYLFLSQAPFVIFNQPHLFNKSAEALELQRPFKCGSYAQRFKNEGGIEGTCMRLHGITSSSEDYCMWGGHSDDCKFNELVHFITAMAEKGYRFAISNALIDTPSRRCRTEPGAPIMRDNVVIFGSISRTNQAL-APVFQVLLPFHIGSWLLLALVLLLLVLLRYAIAIKYGWFRHQKYRSCLLVLVDNLDSVLSNQSLDTSE--------AREARLALTLFRTGMVALLAIFALFYEIAVVNFLFEQRSASIAKDISSLSQAEVNEFSVPARSALEDIWKHSVTQGWKQNLYSDDTPWKQCAWMEQCFEWLTSGDTRFVVSFEVRGKYLMSRRAECDKFALFETRRQLYEFNTVWLYNERCSVERRRTVDREILSLRMDGTMDEAINEY-SGHECIAESKSVIVPAQLVIPMIVLVLPAV---VGVVVIVCRRRKKRAGC----------EKSEKQVSDDESACGESIDV 517
            N +C   N   SQ NG+GCL  L  +   YE C    SN TCY+FL + PF+  ++  L+N S  A +LQ+PF+CG +  +F + GGI G     H +TSS  D CMWGGHSDDC FN+LV +   MA++GYRFA++  L++ PSR+C   P A +    V+I G    +N  +  P  Q++ PF  G+W +   VL+L +++ + IA+++ WFR +   +   +     D  +++++             A +  LA+TLFR  ++AL+AIFALFYE+AVVNFLF+Q++ S++K +  L  A++  FSV   SALE++W  +V  G K N + +D PW++C    +C +W   G T ++V+FE+ GK+L++++ EC +  +F+T+  LY FN  WLYN+  S ERR  VDRE++ LR+DG   + ++ Y   + C       I P  ++IP ++ VLP +   V V+V+  +RR++ +G             S K+  +D S    S D+
Sbjct:   31 NFDCTQHNPRASQNNGKGCLRNLNINRHLYEQCRSKDSNVTCYIFLQEPPFINLDRVQLWNSSDAATQLQKPFECGDFEDQFLHVGGIGGIAFETHKLTSSRNDLCMWGGHSDDCGFNQLVDYTHLMADEGYRFAVTGLLLELPSRQCFHHPSAALTDSAVIIVGQKDASNGVVQGPFEQLIRPFDWGAWGIFGGVLILFIIVCFTIAVRFHWFRGRSLITAFFIFAGERDEAMAHEANVNHHNNDDAMAFATKYGLAMTLFRMALLALIAIFALFYEVAVVNFLFQQQNQSLSKPVKRLPLADLKHFSVLRGSALENVWNATVLAGRKDN-WGNDLPWQRCPTATECVDWTKEGKTTYMVTFEIVGKHLLAQKTECSELTVFKTKDVLYHFNGGWLYNKAVSEERRMQVDRELVGLRIDGQSRKLVDSYLDEYTCEENIVLTIGPTIILIPCLIFVLPPLACSVLVLVLWKKRRRRESGAVGHGVLPSSAHDSNKRFEEDSSTDNSSSDL 540          
BLAST of Gcaud8106.t1 vs. uniprot
Match: A0A2V3IE21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE21_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 3.070e-67
Identity = 159/508 (31.30%), Postives = 249/508 (49.02%), Query Frame = 0
Query:   21 ATHGMFTRPRNAECMPRNLSNSQRNGRGCLARLATHLKDYEICADASNTTCYLFLSQAPFVIFNQPHLFNKSAEALELQRPFKCGSYAQRFKNEGGIEGTCMRLHGITSSSEDYCMWGGHSDDCKFNELVHFITAMAEKGYRFAISNALIDTPSRRCRTEPGAPIMRDNVVIFGSISRTNQALA-PVFQVLLPFHIGSWLLLALVLLLLVLLRYAIAIKYGWFRHQKYRSCLLVLVDNLDSVLS-------------NQSLDTS-------------------------EAREAR-------LALTLFRTGMVALLAIFALFYEIAVVNFLFEQRSASIAKDISSLSQAEVNEFSVPARSALEDIWKHSVTQGWKQNLYSDDT--PWKQCAWMEQCFEWLTSGD--TRFVVSFEVRGKYLMSRRAECDKFALFETRRQLYEFNTVWLYNERCSVERRRTVDREILSLRMDGTMDEAINEYSGHECIAESKSVIVPAQLVIPMIVLVLP 478
            AT  + + PR AEC+     ++  + R   A        YE+C    N+TC++F  + P V ++    F K     ++QRPFKCG       + GGI      LH  TSS +D+C W GH  +C +N LV F+  MA +GYRF +S  +++TP R+C  +   P +   +VI G  S  +     P+ Q+  PF   SW+ L L L + +LL   I  +    R+    + L +   +L+  +              N S+++                          E R  R       LA+ L R   +  +A+F +FYE+++VNF+F+Q++  I KD+ SLS  E+N+FS+   SALE+IW  +V     +   ++DT  PWK+C    QC +W  +G    +F VS+E++ +  +   A C++   FETRR L+ FN+ WLYN       R+  DREI++LR+DGT+    N Y    C       +    +VIP+++ VLP
Sbjct:   40 ATLNLISLPRGAECV-----SALTDKRYAAA--------YEVC---KNSTCFIFKGEPPLVKYDL-ETFYKPENRKKMQRPFKCGDPKSLHPSLGGI---VFELHKKTSSRDDFCTWAGHPSECTWNALVDFVHVMAGRGYRFVVSGPMLETPQRKCYHQASGPWLDSRMVIIGRNSPEDVVSTNPLKQLTQPFETLSWVTLVLFLFVYLLLGIGIVNRIRRRRNVSLVTALFIFTGDLEHAIKHETCPQPPRAERENDSIESGDGSTSDGTSRTASTVHVSVSNGHLGEQRRRRISFLRYSLAINLIRVSFLFFVALFVMFYELSLVNFVFQQQNLHIKKDVDSLSPNELNKFSIMKNSALENIWNRTVNPHGLKYDGTNDTQIPWKRCRNALQCIDWTLNGKYGVKFTVSYELQAQNALQTIASCEELVFFETRRNLHTFNSGWLYNSAVPENIRKRYDREIVALRIDGTLTRIYNSYVDFTCEERRTLKVKSLIIVIPILIFVLP 527          
BLAST of Gcaud8106.t1 vs. uniprot
Match: A0A2V3J388_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J388_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 8.490e-63
Identity = 164/554 (29.60%), Postives = 269/554 (48.56%), Query Frame = 0
Query:    1 MESNRSLQPLLLLLMFWLAQATHGMFTRPRNAE--CMPRNLSNSQRN---GRGCLARLAT--HLKDYEICADASNTTCYLFLSQAPFVIFNQPHLFNKSAEALELQRPFKCGSYAQRFKNEGGIEGTCMRLHGITSSSEDYCMWGGHSDDCKFNELVHFITAMAEKGYRFAISNALIDTPSRRCRTEPGAPIMRDNVVIFGSISRTNQALAP-VFQVLLPFHIGSWLLLALVLLLLVLLRYAIAIKYGWFRHQKYRSCLLVLVDNLDSVL--------------------------SNQSLDTSEAREAR--------------------------LALTLFRTGMVALLAIFALFYEIAVVNFLFEQRSASIAKDISSLSQAEVNEFSVPARSALEDIWKHSVTQG-----WKQNLYSDDTPWKQCAWMEQCFEWLTSGD--TRFVVSFEVRGKYLMSRRAECDKFALFETRRQLYEFNTVWLYNERCSVERRRTVDREILSLRMDGTMDEAINEYSGHECIAESKSVIVPAQLVIPMIVLVLPAVVGVVVIV 487
            M + + L PL+LL     A   H +  R    E  C   N + S +    GRGCL+ L+       + +C       C++F  + P V+F++  +F +  +    Q PFKCG  +    +   + G  + LH  TS+  +YC+W G+  +C +N LV F  AMA +GY+FAI+  +++T  R+C      P + + ++I G        L   + Q++ PF  G+W+ + +VLLL+V+L + +   +         +  ++L+ + +  L                          S ++ + SE R++                           +A +LFR  ++    +F LFYE AVV FLF QR   I K +++LS  E+  F+V   SALEDIW  +V  G     WK  +   + PWK+C+  E C   +  G    RF V++EV G +L+   ++CD    F+T   L+ FN  WL N     E+RR  DRE+++LR++G++ + +N+Y+ H C  ++   I P  LVIP+IVLVLP ++  V +V
Sbjct:   72 MRAAKLLIPLILL---QTALVPHYVLARSVAQEDPCASYNSTESLKTSNVGRGCLSALSDPEFAHYFNVC---KTNVCFIFKWEGPMVMFDKSIVFEEENKT-RFQIPFKCGQPSDWHPS---LAGYAIELHKRTSTRNEYCVWAGNPSECTWNGLVDFTGAMARRGYQFAITGPMLETAQRKCEHYSSGPWLDNPMIIIGRNEPPAIRLGDQISQLVKPFSPGTWITICVVLLLIVILSFILVNVFHVSGSNSLFTAYMLLIGDREQALLFGRSHGKRKKGRRKSCFNMFWLSRRSTKNPNASEIRQSNASSRSESEVCSIDLVAETEQYRSQYNVATSLFRFALICFAGLFFLFYEAAVVQFLFHQRRIEITKSVTTLSDEELRSFAVMGDSALEDIWLATVDPGGSRVDWKNKM---NLPWKRCSKTEDCIRMVKDGTDGVRFTVTYEVEGSFLIHELSDCDHLTRFDTTESLHYFNGGWLMNSLVDHEKRRQFDRELVALRINGSVSQLLNQYADHYCKRDNIVSIGPIILVIPIIVLVLPPLILSVAVV 612          
BLAST of Gcaud8106.t1 vs. uniprot
Match: A0A2V3IT12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT12_9FLOR)

HSP 1 Score: 194 bits (494), Expect = 2.070e-52
Identity = 141/438 (32.19%), Postives = 228/438 (52.05%), Query Frame = 0
Query:   48 GCLARLAT--HLKDYEICADASNTTCYLFLSQAPFVIFNQPHLFNKSAEALELQRPFKCGSYAQRFKNEGGIEGTCMRLHGITSSSEDYCMWGGHSDDCKFNELVHFITAMAEKGYRFAISNALIDTPSRRCRTEPGAPIMRDNVVIFGSISRTNQALAPVFQVLLPFHIGSWLLLALVLLLLVLLRYAIAIKYGWFRHQKYRSCLLVLVDNLDSVLSNQSLDTSEAREARLALTLFRTGMVALLAIFALFYEIAVVNFLFEQRSASIAKDISSLSQAEVNEFSVPARSALEDIWKHSVTQGWKQNLYSDDT--PWKQCAWMEQCFEWLTSG--DTRFVVSFEVRGKYLMSRRAECDKFALFETRRQLYEFNTVWLYNERCSVERRRTVDREILSLRMDGTMDEAINEYSGHE-CIAESKSVIVPAQLVIPMIVLVLP 478
            GCL  LA   H  DY  C    N TCYLFL + PF++  Q     K+ + L   +PF C    +      G+EG    +H +TSS+   C++ G    C FN+L  F    A+ G+RFA+S A IDTP RRC   P AP++  +++I G+ +  + A   + QV  PF  G+W++L  V L  VL+  AIA        +K    + VL       L  +  D +  R A  +L++ R  + +  AI  LFY  AVVNFLF Q +  + K ++ L  ++++ ++V   SALE +W  SV    ++   ++ T  PWK+C+  ++C EW+  G  + +F V++ V G + +   A+C     + +++ L  FN  WL+N    ++ +  ++R+I+ LR+ GT+ E ++   G   C   + S I    ++IP+ + VLP
Sbjct:   35 GCLPPLARNIHHPDYAHC---KNQTCYLFLQEPPFIVVPQ----FKTRDPL--YKPFPCSEPQELHP---GLEGIAFEVHALTSSARSSCIFAGQKSQCSFNQLHDFAVWYAQYGFRFAVSGAWIDTPERRCHLTPSAPLVDSSMMIVGA-NIASPATNALEQVTRPFRTGTWVVLLGVTLSFVLVGIAIAGIVA----KKLSKAVYVLTG-----LKERLQDVNSKRLAS-SLSMLRAAVSSFGAIVYLFYGAAVVNFLFAQSNVHMTKSVAGLRVSDLSHYAVLKDSALEYVWDASVDPMRRKYDSNESTNYPWKRCSSGKECIEWVYKGTNNVQFAVTYGVLGNHFIHELADCHILTEWRSKQPLATFNIGWLFNRAIPMDEQLEINRQIVGLRIRGTIGEFVSRRKGDATCEEVAVSTIGSLVVLIPIGIFVLP 449          
The following BLAST results are available for this feature:
BLAST of Gcaud8106.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQ92_9FLOR1.160e-10737.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE21_9FLOR3.070e-6731.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J388_9FLOR8.490e-6329.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT12_9FLOR2.070e-5232.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 307..467
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 489..523
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 468..488
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 466..488
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 279..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1070_length_14265_cov_4.638281contigNODE_1070_length_14265_cov_4.638281:3246..5063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8106.t1Gcaud8106.t1Gracilaria caudata M_176_S67 malemRNANODE_1070_length_14265_cov_4.638281 3246..5063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8106.t1 ID=Gcaud8106.t1|Name=Gcaud8106.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=524bp
MESNRSLQPLLLLLMFWLAQATHGMFTRPRNAECMPRNLSNSQRNGRGCL
ARLATHLKDYEICADASNTTCYLFLSQAPFVIFNQPHLFNKSAEALELQR
PFKCGSYAQRFKNEGGIEGTCMRLHGITSSSEDYCMWGGHSDDCKFNELV
HFITAMAEKGYRFAISNALIDTPSRRCRTEPGAPIMRDNVVIFGSISRTN
QALAPVFQVLLPFHIGSWLLLALVLLLLVLLRYAIAIKYGWFRHQKYRSC
LLVLVDNLDSVLSNQSLDTSEAREARLALTLFRTGMVALLAIFALFYEIA
VVNFLFEQRSASIAKDISSLSQAEVNEFSVPARSALEDIWKHSVTQGWKQ
NLYSDDTPWKQCAWMEQCFEWLTSGDTRFVVSFEVRGKYLMSRRAECDKF
ALFETRRQLYEFNTVWLYNERCSVERRRTVDREILSLRMDGTMDEAINEY
SGHECIAESKSVIVPAQLVIPMIVLVLPAVVGVVVIVCRRRKKRAGCEKS
EKQVSDDESACGESIDVCVCAQS*
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