Gcaud8083.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8083.t1
Unique Name	Gcaud8083.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	360

Homology

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BLAST of Gcaud8083.t1 vs. uniprot
Match: A0A2V3IMX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMX2_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 1.520e-46
Identity = 116/223 (52.02%), Postives = 144/223 (64.57%), Query Frame = 0

Query:  145 MDPWQYDT---LAAHCHDRNPSTKADAASANDNHSHSRRSRRISHSSESRRRKFRPKFFERKLNRR--MRHEFSQRSAIPDRLQDAFVASSAENSQSHFQTERRSTNAASSQSP----ILVTYTPFQDDSLLTAVTAEASEQFDQPLSRPRAASEPSVRRRQSTFFAGREGVLSIWDRLWRRRRSTQHTSSATAHS-TESSASRRSGKLSRLRRLDFRLTSRS 357
            MDPWQYD     AA CH   P +   +AS++ +   S R  R S  S+SRR K  PKF +RKL+RR   RH+F  R+ IPDRLQDAFVAS   N Q H Q E    NA   Q P    +L+ YTP +D+S+LTAVTAE++      LSR RA SEP+ RRR  +F + R+ V S+WDR W+RRR+TQ   +  A + + SSASR SGKLSRLR+LDFRLTSRS
Sbjct:    1 MDPWQYDADFLAAADCH--RPRSHRKSASSHPSQRFSERHPRPSRLSDSRRWKLYPKFLDRKLSRRRQQRHDFFPRTVIPDRLQDAFVASDPHN-QPHAQPEHLHPNAP--QHPQTAHLLLPYTPIRDNSVLTAVTAESATDLHHDLSRRRADSEPA-RRRSLSFLSRRDSVFSLWDRFWKRRRTTQAARAPPATTESHSSASRTSGKLSRLRKLDFRLTSRS 217

The following BLAST results are available for this feature:

BLAST of Gcaud8083.t1 vs. uniprot

BLAST of Gcaud8083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMX2_9FLOR	1.520e-46	52.02	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1375_length_11068_cov_4.224287	contig	NODE_1375_length_11068_cov_4.224287:6613..7692 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8083.t1	Gcaud8083.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1375_length_11068_cov_4.224287 6613..7692 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8083.t1 ID=Gcaud8083.t1|Name=Gcaud8083.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=360bp
MVSASPSPRLRRHRTSSREDSCIEPRAYHAALWPFRGPASIASSLSPSNS
SRRLPRPLAAPIINLRSSAIFALEHSFEFSELHEQPVPLSSGLSPTLRDA
LPHPTPLRTPSPPVPSDLSAASTRAVTEPHTLRDLRRVTAPLSMMDPWQY
DTLAAHCHDRNPSTKADAASANDNHSHSRRSRRISHSSESRRRKFRPKFF
ERKLNRRMRHEFSQRSAIPDRLQDAFVASSAENSQSHFQTERRSTNAASS
QSPILVTYTPFQDDSLLTAVTAEASEQFDQPLSRPRAASEPSVRRRQSTF
FAGREGVLSIWDRLWRRRRSTQHTSSATAHSTESSASRRSGKLSRLRRLD
FRLTSRSYL*