Gcaud8076.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8076.t1
Unique NameGcaud8076.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length410
Homology
BLAST of Gcaud8076.t1 vs. uniprot
Match: A0A2V3ICZ7_9FLOR (Apoptotic protease-activating factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ7_9FLOR)

HSP 1 Score: 306 bits (785), Expect = 9.140e-90
Identity = 185/382 (48.43%), Postives = 241/382 (63.09%), Query Frame = 0
Query:    1 MLVATHQRIAEKVKQLHFSQQRTLNVEICHDVSLIQNHLAAANSDITGLSQYLDHVHIYTQRKASSSRSSSQRFKHITNVFSKLNLKGKALHRTTFINDVLESAQSHLDSAWSVLSDVRFHQIRHESKDET----------------------------GVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSGSGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAGQFFGE 354
            +LVA+H RI+++VK L  S Q   +  I  D+SLI  HL  A  D+T L+Q+ D V + +   +S SR   +R   +   FS L   GKALH+TT + + L+S Q+ LDS+W +LSD+   QI+++    T                            G   TCEAKLK A+L  ++      VI G IGGGG GKS AVRA+ASLSEV   FPDGIYEILLGMDA +LTL  E+ NCIE+S G+ LA QL +ETDM +V R AE WF +K ILLI+DD+WE+   + +++F+LKRLLGS GS MVFT+RSS M  F+  V+EFELR   S+TS+ +LL+N RM A D RVARN ++   LL+V  GLPAALAVAGQ  G+
Sbjct:   95 LLVASHARISDRVKLLAASPQ---DKPISGDLSLIHEHLGVAKYDLTYLTQHFDEVLVSSNSPSSPSRR--RRRDRVAMFFSDLLATGKALHKTTRLEEALDSVQTQLDSSWRLLSDISLQQIKNQVSAITRTDPDGFVPNIAVRPNPDNLVLDFGLKNGKAVTCEAKLKHAVLQRDNPLDRADVI-GVIGGGGTGKSCAVRAVASLSEVHMKFPDGIYEILLGMDAKELTLKNEISNCIERSGGKALAEQLTAETDMGKVLRNAEIWFGNKRILLIVDDVWESGSATGNVVFTLKRLLGSYGSCMVFTSRSSTMHPFARTVVEFELRKSCSSTSKAILLDNARMKAGDFRVARNTKSFELLLEVCDGLPAALAVAGQLMGK 470          
BLAST of Gcaud8076.t1 vs. uniprot
Match: A0A2V3IUE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE3_9FLOR)

HSP 1 Score: 197 bits (502), Expect = 8.500e-57
Identity = 121/271 (44.65%), Postives = 154/271 (56.83%), Query Frame = 0
Query:    1 MLVATHQRIAEKVKQLHFSQQRTLNVEICHDVSLIQNHLAAANSDITGLSQYLDHVHIYTQRKASSSRSSSQRFKHITNVFSKLNLKGKALHRTTFINDVLESAQSHLDSAWSVLSDVRFHQIRH------------------------------ESKDETGVPATCEAKLKQALL--GAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEG 239
            MLVA H RI EK++ LH S   T N E   D+ L Q H+ +A+SD++ LS+YL    I +    S S   S+R K I N FSK + K +A+ RTT   + L S Q+HL++AW VL+++R  +I                                ES DE G   TCE KLKQA++  G+        ++ G+IGGGGMGKS AVR L +L EVR  FP GIYEI LG+DA +LTL KELCNCIE S G  LA Q  SE +M EV R+AEG
Sbjct:   35 MLVAAHDRICEKLRYLHASLSETSNEETKRDMRLFQAHINSADSDLSSLSEYLS---IPSNGLDSQSSGGSRRLKRIANAFSKASAKTRAIQRTTRNEETLSSVQNHLNNAWRVLNEIRLVRIEEGIKAITLGEREEFKGRVVVQPNPENLVLDFESMDENGAAVTCEGKLKQAIMQPGSSFVSVIDGIVTGAIGGGGMGKSCAVRGLTALQEVRDMFPGGIYEISLGLDAGELTLKKELCNCIEMSGGVILAKQTMSERNMNEVIRKAEG 302          
BLAST of Gcaud8076.t1 vs. uniprot
Match: A0A2V3ITH8_9FLOR (NB-ARC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITH8_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 1.140e-28
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 0
Query:  120 FHQIRHESKDETGVPATCEAKLKQALL--------GAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWF--SSKNILLILDDMWENDKLSRDMLFSLKRLLGSSGSGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAGQ 350
            F  + ++SKD  G   T E +LK  +L        G   A      + G++GGGG+GK+ AVR LA   E+   F  GIYEI LG DA + T+   L   I+ +   T A +L   +D+     +A  WF    K  L I+DD+WEN+ +   ++  L +++ +    +VFT+R+ +    +   IEF  R   +  +R MLL   +M  +D  V +N E +RR+L + GGLPAALAVAG+
Sbjct:  185 FLALDYDSKDREGNAVTIEGELKAKILQTRTNTCVGVLDAHVTDSKVTGAVGGGGVGKTCAVRGLAKDPEILKTFTGGIYEIALGKDAHRGTITDRLRILIQLTGNRTTARELDGNSDLNTHIVKACEWFRLQEKPCLFIVDDVWENNGIDGSIIRELSKIVDACDGCIVFTSRNHSFSEVADETIEFRAR--ETKEARAMLLCKAQMNENDTLVVQNEEKIRRVLHICGGLPAALAVAGR 423          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7Q6P4_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P4_CHOCR)

HSP 1 Score: 112 bits (280), Expect = 5.000e-23
Identity = 71/233 (30.47%), Postives = 124/233 (53.22%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  +    +  V A ++G GG+GK+ A+RA+A   E++  F  G+Y + LG D +   L +ELC  +E S G   A ++  +++   V  +   WF S   L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  + FE R      +  ML+       D++  AR +E +  +L++ GGLP AL VAG
Sbjct:  169 VKLDSRGSDGLPNTCESRLKAAVLRRDR---NMQVGATAVGQGGVGKTCALRAIAHDVEIKAEFSGGVYFMSLGKDGNVGRLIEELCVIVEASGGNQTAAEMRGQSEFGRVLTKVHAWFGSHVCLFIIDDVWVVNDIDANILQKLSVLADTAGGSGERRSRLLYSTRDRELRQI-GERVAFEPRETEGKEAVDMLVHASEANRDEVDDARCKEAVGEILEMCGGLPLALNVAG 397          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7Q5I1_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5I1_CHOCR)

HSP 1 Score: 111 bits (278), Expect = 9.830e-23
Identity = 72/235 (30.64%), Postives = 128/235 (54.47%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLEN--GRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  ++   ++ V A ++G GG+GK+ A+RA+A   +++  F  G+Y + LG D +   L  ELC  +E S G   A ++  +++ + V  R   WF S   L I+DD+W  + +  ++L  L  L G++G      S ++++ R   ++   G  + FE R      +  ML+    G    +++  AR +E +  +L++ GGLP AL VAG
Sbjct:  191 VKLDSQGSDGLPNTCESRLKAAVLRRDN---NEQVGATAVGQGGVGKTCALRAIAHDDKIKAEFSGGVYFMSLGKDGNVGRLIDELCVIVETSGGIQTAAEMREQSEFERVLARVHAWFYSHVCLFIVDDVWVVNDIDANILQKLSVLTGTAGGSGERTSRLLYSTRDRELRQI-GEQVSFEPRETEGKEAVDMLVHASIGEANREEVDDARCKEAVSEILEMCGGLPLALNVAG 421          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7QEV3_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV3_CHOCR)

HSP 1 Score: 110 bits (275), Expect = 2.390e-22
Identity = 70/233 (30.04%), Postives = 126/233 (54.08%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  +    ++ V A ++G GG+GK+ A+RA+A   ++   F  G+Y + LG D +   L +ELC  +E S G+  A ++  +++   V  + + WF     L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  I FE R      +  ML+       +++  AR +E +R +L++ GGLP AL VAG
Sbjct:  218 VKLDSRGSDGLPNTCESRLKAAVLRRDR---NKQVGATAVGQGGVGKTCALRAIAHDDKIMEEFSGGVYFMSLGKDGNVGRLIEELCLIVEASGGKQTAAEMREQSEFGRVLTKVQAWFCRHVCLFIIDDVWVVNDIDSNILQKLSVLAETAGGSGGRRSRLLYSTRDRELRQL-GKRIAFEPRENVGKEAVEMLVHASEASREEVDNARCKEAVREILEMCGGLPLALNVAG 446          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7QQZ5_CHOCR (WD40-repeat containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ5_CHOCR)

HSP 1 Score: 110 bits (274), Expect = 3.260e-22
Identity = 71/233 (30.47%), Postives = 125/233 (53.65%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +SK   G P TCE+ LK A+L  +    ++ V A ++G GG+GK+ A+RA+A   E++  F  G+Y + LG D +   + +ELC  +E S G+  A ++  +++ + V  + + WF S   L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  I FE R      +  ML+        ++  AR +E +  +L++ GGLP AL VAG
Sbjct:  278 VKLDSKGNDGFPNTCESLLKAAVLRRDR---NEQVGATAVGQGGVGKTCALRAIAHDGEIKTEFSGGVYFMSLGKDGNVGRVIEELCLIVEASGGKQTAAEMREQSEFERVLVKVQAWFCSHVCLFIIDDVWVVNDIEANILQKLSVLADTAGGSGERRSKLLYSTRDRELRQL-GERIAFEPRETEGKEAVDMLVHASEANRGEVDDARCKEAVSEILEMCGGLPLALNVAG 506          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7QKY3_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKY3_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 4.160e-22
Identity = 69/233 (29.61%), Postives = 126/233 (54.08%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  +    ++ V A ++G GG+GK+ A+RA+A   ++   F  G+Y + LG D +   L +ELC  +E S G+  A ++  +++   V  + + WF     L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  + FE R      +  ML+       +++  AR +E +R +L++ GGLP AL VAG
Sbjct:  181 VKLDSRGSDGLPNTCESRLKAAVLRRDR---NKQVGATAVGQGGVGKTCALRAIAHDDKIMEEFSGGVYFMSLGKDGNVGRLIEELCLIVEASGGKQTAAEMREQSEFGRVLTKVQAWFCRHVCLFIIDDVWVVNDIDANILQKLSVLAETAGGSRGRRSRLLYSTRDRELRQI-GERVAFEPRENVGKEAVEMLVHASEANREEVDNARCKEAVREILEMCGGLPLALNVAG 409          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7QGM0_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGM0_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 4.370e-22
Identity = 69/233 (29.61%), Postives = 126/233 (54.08%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  +    ++ V A ++G GG+GK+ A+RA+A   ++   F  G+Y + LG D +   L +ELC  +E S G+  A ++  +++   V  + + WF     L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  + FE R      +  ML+       +++  AR +E +R +L++ GGLP AL VAG
Sbjct:  225 VKLDSRGSDGLPNTCESRLKAAVLRRDR---NKQVGATAVGQGGVGKTCALRAIAHDDKIMEEFSGGVYFMSLGKDGNVGRLIEELCLIVEASGGKQTAAEMREQSEFGRVLTKVQAWFCRHVCLFIIDDVWVVNDIDANILQKLSVLAETAGGSGGRRSRLLYSTRDRELRQI-GERVAFEPRENVGKEAVEMLVHASEANREEVDNARCKEAVREILEMCGGLPLALNVAG 453          
BLAST of Gcaud8076.t1 vs. uniprot
Match: R7QKQ2_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKQ2_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 7.730e-22
Identity = 69/233 (29.61%), Postives = 126/233 (54.08%), Query Frame = 0
Query:  123 IRHESKDETGVPATCEAKLKQALLGAESARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDASKLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLILDDMWENDKLSRDMLFSLKRLLGSSG------SGMVFTARSSAMKTFSGNVIEFELRGPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAG 349
            ++ +S+   G+P TCE++LK A+L  +    ++ V A ++G GG+GK+ A+RA+A   ++   F  G+Y + LG D +   L +ELC  +E S G+  A ++  +++   V  + + WF     L I+DD+W  + +  ++L  L  L  ++G      S ++++ R   ++   G  + FE R      +  ML+       +++  AR +E +R +L++ GGLP AL VAG
Sbjct:  281 VKLDSRGSDGLPNTCESRLKAAVLRRDR---NKQVGATAVGQGGVGKTCALRAIAHDDKIMEEFSGGVYFMSLGKDGNVGRLIEELCLIVEASGGKQTATEMREQSEFGRVLTKVQAWFCRHVCLFIIDDVWVVNDIDSNILQKLSVLAETAGGSGGRRSRLLYSTRDRELRQI-GERVAFEPRENVGKEAVEMLVHASEANREEVDNARCKEAVREILEMCGGLPLALNVAG 509          
The following BLAST results are available for this feature:
BLAST of Gcaud8076.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3ICZ7_9FLOR9.140e-9048.43Apoptotic protease-activating factor 1 n=1 Tax=Gra... [more]
A0A2V3IUE3_9FLOR8.500e-5744.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITH8_9FLOR1.140e-2835.27NB-ARC domain-containing protein n=1 Tax=Gracilari... [more]
R7Q6P4_CHOCR5.000e-2330.47WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
R7Q5I1_CHOCR9.830e-2330.64WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
R7QEV3_CHOCR2.390e-2230.04WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
R7QQZ5_CHOCR3.260e-2230.47WD40-repeat containing protein n=2 Tax=Chondrus cr... [more]
R7QKY3_CHOCR4.160e-2229.61WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
R7QGM0_CHOCR4.370e-2229.61WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
R7QKQ2_CHOCR7.730e-2229.61WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00364DISEASERSISTcoord: 158..173
score: 36.88
coord: 240..254
score: 37.0
coord: 338..352
score: 39.0
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 153..354
e-value: 5.4E-9
score: 35.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 118..295
e-value: 1.3E-11
score: 46.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 140..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1675_length_9137_cov_4.183285contigNODE_1675_length_9137_cov_4.183285:1601..3015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8076.t1Gcaud8076.t1Gracilaria caudata M_176_S67 malemRNANODE_1675_length_9137_cov_4.183285 1601..3015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8076.t1 ID=Gcaud8076.t1|Name=Gcaud8076.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=410bp
MLVATHQRIAEKVKQLHFSQQRTLNVEICHDVSLIQNHLAAANSDITGLS
QYLDHVHIYTQRKASSSRSSSQRFKHITNVFSKLNLKGKALHRTTFINDV
LESAQSHLDSAWSVLSDVRFHQIRHESKDETGVPATCEAKLKQALLGAES
ARGHQVVIAGSIGGGGMGKSGAVRALASLSEVRGGFPDGIYEILLGMDAS
KLTLGKELCNCIEKSEGETLAGQLASETDMKEVFRRAEGWFSSKNILLIL
DDMWENDKLSRDMLFSLKRLLGSSGSGMVFTARSSAMKTFSGNVIEFELR
GPTSTTSRTMLLENGRMMADDIRVARNRETLRRLLDVGGGLPAALAVAGQ
FFGEETKRLLNLKFKGNRVELKKPAWKSVRLRGGKLKKVQAGEVKLKQRK
LNNGEMRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002182NB-ARC
IPR027417P-loop_NTPase