Gcaud8069.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A2V3ILG7_9FLOR (Putative ATP-dependent RNA helicase ddx52 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG7_9FLOR) HSP 1 Score: 307 bits (787), Expect = 3.790e-99 Identity = 157/211 (74.41%), Postives = 182/211 (86.26%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQVG 211
M D+KRVTVGAS YGGSFAVDEAV HI+QRFVFVGG+ EQGKVMAVRNL+R+G++ PVL+FVQ+KERAA LFREL+YDGVHVDAIH+DRT AAR +AV RFR G WVLIATDVL+RGLDFLAV+TVINYD+PSS+AAYVHRIGR G A++LFTEED KL+ VVRVARASGA +P+WL++ G RVR DEV+RLE+RPPKR VG
Sbjct: 259 MNDMKRVTVGASAYGGSFAVDEAVKHIEQRFVFVGGRAEQGKVMAVRNLLRNGVQAPVLLFVQSKERAAQLFRELLYDGVHVDAIHSDRTVAARETAVQRFREGNTWVLIATDVLSRGLDFLAVRTVINYDVPSSAAAYVHRIGRCGRNGRHGVALSLFTEEDLKLIGAVVRVARASGALVPEWLLRAGGRVRADEVRRLERRPPKRAAVG 469
BLAST of Gcaud8069.t1 vs. uniprot
Match: R7QFR3_CHOCR (DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR3_CHOCR) HSP 1 Score: 260 bits (665), Expect = 3.220e-80 Identity = 134/211 (63.51%), Postives = 176/211 (83.41%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQVG 211
+K K++ + YGGS AV + I+Q+F+FVGG+GEQGKVMAVR L+++G++ P+L+FVQTK+RAA+L+RELVYDGV V+AIHADR+ AR AV RFR G++WVLIATDVLARGLDFLAV++V+NYDMPSS++AYVHRIGRTXXXXX AVTLFTEED+ L+ V++VA+ SGA++P+W +KL VR+D V+R+EKRPP RK++G
Sbjct: 285 LKKQKKIVIDGGAYGGSAAVGGVAARIEQKFMFVGGRGEQGKVMAVRGLLKEGLRAPILLFVQTKDRAAELYRELVYDGVKVEAIHADRSQQARMRAVERFRTGEVWVLIATDVLARGLDFLAVESVVNYDMPSSASAYVHRIGRTXXXXXXXTAVTLFTEEDRVLLGPVLKVAKVSGADVPEWALKLKG-VRKDVVRRMEKRPPTRKRIG 494
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A7S3A9B4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9B4_9RHOD) HSP 1 Score: 212 bits (540), Expect = 1.020e-61 Identity = 115/213 (53.99%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWL--VKLGARVRRDEVKRLEKRPPKRKQVG 211
MK ++ VG YGG A +A S + QRF+F GQGE GKV A R L+ +G+ PP LVFVQ+++RA+ LF+ELV+DGV++DAIHA+RTAA R++AV FR+G++W+LIATD++ARG+DF + TV+NYD+P+S AYVHRIGR XXXXX A+T FTE+DK L+ +V VA ASGA +P W+ +K G RV+ EKR P+R ++G
Sbjct: 304 MKTPVKIIVGGQSYGGGTAAVDA-STVKQRFMFADGQGEAGKVAAFRRLLTEGLMPPTLVFVQSQDRASQLFKELVFDGVNIDAIHANRTAAQRSTAVENFRSGRVWILIATDLMARGIDFRTINTVVNYDLPASPIAYVHRIGRXXXXXXXXQAITFFTEDDKPLLRKIVNVAVASGAEVPKWMLDIKPGERVK---ASLQEKRQPRRDRIG 512
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A250XAM3_9CHLO (RNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAM3_9CHLO) HSP 1 Score: 194 bits (494), Expect = 3.760e-55 Identity = 101/200 (50.50%), Postives = 139/200 (69.50%), Query Frame = 0
Query: 6 RVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPP 205
RVTVG + A S ++QR +FVG E GK+MA+R LI++G+KPP LVFV +K+RA L REL+YDGVHVD+IH++++AAARA+AV FR G+ W+LIATD++ RG+DF+ V+TV+NYD P S+A Y+HRIGRT G AVT FTEED + V + R +G +PDW+V++ +RD K+ + PP
Sbjct: 327 RVTVGVR--------NSAASSVNQRLLFVGR--EAGKLMALRQLIKEGVKPPTLVFVGSKDRAKSLHRELMYDGVHVDSIHSEQSAAARAAAVDNFRLGRTWILIATDLIGRGMDFVGVKTVVNYDFPHSTADYIHRIGRTGRADQQGEAVTFFTEEDSGQLRSVANLVREAGGEVPDWMVQM----KRDRDKKRHRLPP 512
BLAST of Gcaud8069.t1 vs. uniprot
Match: A7SFZ1_NEMVE (RNA helicase (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SFZ1_NEMVE) HSP 1 Score: 191 bits (484), Expect = 2.660e-54 Identity = 104/205 (50.73%), Postives = 144/205 (70.24%), Query Frame = 0
Query: 6 RVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQV 210
RVTVG + A + +DQ +FVG E GK++AVR++++ G PPVL+FVQ+K+RA +LF EL+YDG++VD IH+DRT A R + V FR GKIWVLIAT+++ RG+DF V VINYD P+S+ AY+HRIGRTXXXXX A+T FTEED + + V ++SG ++PDW++K+ RR++ K+LEK P KR +
Sbjct: 255 RVTVGIR--------NSATATVDQELLFVGQ--ESGKLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIGRTXXXXXXXKAITFFTEEDTTSLRSIANVIKSSGCDVPDWMLKIKKASRREK-KKLEKAPVKRAAI 448
BLAST of Gcaud8069.t1 vs. uniprot
Match: UPI0013901701 (probable ATP-dependent RNA helicase DDX52 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013901701) HSP 1 Score: 191 bits (484), Expect = 2.640e-53 Identity = 104/205 (50.73%), Postives = 144/205 (70.24%), Query Frame = 0
Query: 6 RVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQV 210
RVTVG + A + +DQ +FVG E GK++AVR++++ G PPVL+FVQ+K+RA +LF EL+YDG++VD IH+DRT A R + V FR GKIWVLIAT+++ RG+DF V VINYD P+S+ AY+HRIGRTXXXXX A+T FTEED + + V ++SG ++PDW++K+ RR++ K+LEK P KR +
Sbjct: 370 RVTVGIR--------NSATATVDQELLFVGQ--ESGKLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIGRTXXXXXXXKAITFFTEEDTTSLRSIANVIKSSGCDVPDWMLKIKKASRREK-KKLEKAPVKRAAI 563
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A6S8LCF8_DUNTE (RNA helicase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A6S8LCF8_DUNTE) HSP 1 Score: 187 bits (475), Expect = 2.460e-52 Identity = 94/183 (51.37%), Postives = 131/183 (71.58%), Query Frame = 0
Query: 6 RVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKL 188
RVTVGA + AV+ +DQR +FVG E GK++A+R L+ +G+KPPVLVFV TK+RA L +EL+YDGV D++ A ++ AAR +AV FR+G+ WVL++TD++ RG+DF+ V TVINYDMP+++ Y+HRIGRT +G AVT FTEEDK ++ V + R SG N+PDW+ K+
Sbjct: 320 RVTVGAR--------NTAVNTVDQRLLFVGR--ENGKLLALRQLLTEGLKPPVLVFVATKDRARALHKELMYDGVRADSLSASQSMAARTAAVDNFRSGRTWVLVSTDLIGRGMDFIGVNTVINYDMPATTTDYIHRIGRTGRAGHTGTAVTFFTEEDKPVLRPVANLIRESGGNVPDWMTKM 492
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A507CMM3_9FUNG (RNA helicase n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CMM3_9FUNG) HSP 1 Score: 186 bits (473), Expect = 2.730e-52 Identity = 105/210 (50.00%), Postives = 146/210 (69.52%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQV 210
M D R+ +GAS + A I Q ++VG E+GK++A+R LI++GIKPPVL+FVQ+ ERA +LF ELVYDG+HVD IHADR+ + R + V FR G++WVLI T+++ARG+DF+ V VINYD P + +Y+HRIGRTXXXXX G AVT FT++D + VV V R SG +P+W+++L R + + K L+K P KRK++
Sbjct: 314 MIDPVRIVIGAS--------NAATETIKQSLLYVGS--EEGKMIAIRQLIQEGIKPPVLIFVQSIERARELFHELVYDGIHVDIIHADRSKSQRDAVVDNFRQGRVWVLITTELMARGIDFMGVNLVINYDFPQTVQSYIHRIGRTXXXXXXGEAVTYFTKDDVVYLKSVVNVMRESGCEVPEWMLQL-KRPSKAKRKHLKKFPIKRKEI 512
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A397TD01_9GLOM (RNA helicase n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TD01_9GLOM) HSP 1 Score: 184 bits (468), Expect = 3.270e-52 Identity = 103/210 (49.05%), Postives = 145/210 (69.05%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGGSFAVDEAVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQV 210
MKD RV +G + A I QR V+VG E+GK++AVR LI++G KPPVL+FVQ+ ERA +LF EL+YD ++VD IH++RT A R S + FR GKIWVLIAT+++ARG+DF V VINYD P S +Y+HRIGRTXXXXX+G+AVT +T++D + +V V + SG +PDW+++L ++ ++L K+P +RK +
Sbjct: 222 MKDPIRVVIGLK--------NAATETIKQRLVYVGQ--EEGKLIAVRQLIQEGFKPPVLIFVQSIERAKELFHELIYDSINVDVIHSERTKAQRDSIILNFRQGKIWVLIATELMARGMDFKGVNLVINYDFPQSVQSYIHRIGRTXXXXXTGDAVTYYTKDDAPYLKSIVNVMKESGCEIPDWMLQL-KNPSKESKQQLRKKPIERKTI 420
BLAST of Gcaud8069.t1 vs. uniprot
Match: A0A7S0QAU5_9EUKA (RNA helicase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QAU5_9EUKA) HSP 1 Score: 186 bits (472), Expect = 3.970e-52 Identity = 98/188 (52.13%), Postives = 135/188 (71.81%), Query Frame = 0
Query: 23 AVSHIDQRFVFVGGQGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELVYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSSAAYVHRIGRTXXXXXSGNAVTLFTEEDKKLVAGVVRVARASGANLPDWLVKLGARVRRDEVKRLEKRPPKRKQV 210
A ++Q+ VFVG E GK++A+R +I+ GI+PPVL+FVQ+KERA +LF +LVYDG+ VD IHADR+ A R V +FR GK+WVLIAT+++ARG+DF VQ V+N+D P S+ +Y+HRIG XXXXX A+T FTE D + + + V +ASG +PDW++KL A +RRDE +R P RK +
Sbjct: 320 AAETVEQKLVFVGR--EDGKMVALRQMIKQGIQPPVLIFVQSKERALELFHQLVYDGLRVDVIHADRSQAQRDEIVDQFRLGKVWVLIATELMARGMDFKGVQLVLNFDFPQSTVSYIHRIGXXXXXXXXXKAITYFTEADVEQLRSIANVLKASGCEVPDWMLKLKASLRRDEKRRRAVAPISRKSI 505 The following BLAST results are available for this feature:
BLAST of Gcaud8069.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8069.t1 ID=Gcaud8069.t1|Name=Gcaud8069.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bpback to top |