Gcaud8061.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8061.t1
Unique NameGcaud8061.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length187
Homology
BLAST of Gcaud8061.t1 vs. uniprot
Match: A0A2V3IHG3_9FLOR (Protein kinase domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG3_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 7.570e-47
Identity = 88/179 (49.16%), Postives = 120/179 (67.04%), Query Frame = 0
Query:    3 YVVMERLGVTVNDWLAGRSQPVSSFTILRICNQVYNIIRRMHEKNVAHNDISLHNIMFERRQGDGGNLYVIDFGNAGSNFWEAARDDLAALCDIMVKMFRNSQTGLFSEEDRACLGYGDLTRDERRKIYANLHRAYRFREREGVPIPQAVRSIVRMLVDGEEFNYSELGRLFRQALCDA 181
            Y+VM+RLG +V+  L  RS+P S+++IL  CNQV+NI+RR+HE+NVAH DI+L N++F R  GD  NLYVIDFG++     +   DD+A LC  MV MFRN   GL  + +R  L Y  LT  + + I  NL RA+  R R+G PIPQ V +IVR ++ G + ++SEL RLF +AL  A
Sbjct:   96 YLVMKRLGYSVDSSLFARSRPASNYSILYTCNQVFNILRRLHERNVAHGDITLKNVVFGR-SGDRDNLYVIDFGSSRPADPDLVLDDVAELCHCMVLMFRNGVDGLVPDNEREGLLYDSLTAIQVQMIRRNLDRAFELRARQGTPIPQEVATIVRTVMSGNDIDHSELERLFLRALNGA 273          
BLAST of Gcaud8061.t1 vs. uniprot
Match: A0A2V3IIF6_9FLOR (Protein kinase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIF6_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 2.770e-16
Identity = 54/176 (30.68%), Postives = 92/176 (52.27%), Query Frame = 0
Query:    3 YVVMERLGVTVNDWLAGRSQPVSSFTILRICNQVYNIIRRMHEKNVAHNDISLHNIMFERRQGDGGNLYVIDFGNAGSNFWEAARDDLAALCDIMVKMFRNSQTGLFSEEDRACLGYGDLTRDERRKIYANLHRAYRFREREGVPIPQAVRSIVRMLVDGEEFNYSELGRLFRQAL 178
            Y+VM++LG +V+ +    +Q  S+ TIL +  QV++I+  +H K+  H DI + N++    + D G+LY+IDFG +      +       L D+ V++FR+ +  L   E  + L   +L+ ++   I  N+  AY FR R   PIP+  R +V   +     +Y  L  L + AL
Sbjct:  101 YIVMQKLGNSVDKYWVESNQHFSNTTILMLTIQVFDIVESLHRKHFYHGDIKISNVV--TGELDTGSLYLIDFGISSCVSCHSXXXXXXLL-DMAVELFRDGEGNLMPLEQISGLRLDNLSDEQEEVIRKNVDAAYNFRARAHTPIPEEFRVMVHEALIHRPLDYRRLRSLLKSAL 273          
The following BLAST results are available for this feature:
BLAST of Gcaud8061.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHG3_9FLOR7.570e-4749.16Protein kinase domain-containing protein n=2 Tax=G... [more]
A0A2V3IIF6_9FLOR2.770e-1630.68Protein kinase domain-containing protein n=1 Tax=G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06293Kdocoord: 14..91
e-value: 7.7E-8
score: 32.0
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 1..82
e-value: 3.3E-16
score: 61.2
NoneNo IPR availableCDDcd00180PKccoord: 3..78
e-value: 9.13363E-12
score: 59.2063
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1..186
score: 10.789203
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1330_length_11355_cov_4.428800contigNODE_1330_length_11355_cov_4.428800:2..562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8061.t1Gcaud8061.t1Gracilaria caudata M_176_S67 malemRNANODE_1330_length_11355_cov_4.428800 2..562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8061.t1 ID=Gcaud8061.t1|Name=Gcaud8061.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=187bp
KHYVVMERLGVTVNDWLAGRSQPVSSFTILRICNQVYNIIRRMHEKNVAH
NDISLHNIMFERRQGDGGNLYVIDFGNAGSNFWEAARDDLAALCDIMVKM
FRNSQTGLFSEEDRACLGYGDLTRDERRKIYANLHRAYRFREREGVPIPQ
AVRSIVRMLVDGEEFNYSELGRLFRQALCDARDQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf