Gcaud8056.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8056.t1
Unique NameGcaud8056.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length202
Homology
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BLAST of Gcaud8056.t1 vs. uniprot
Match: A0A2V3IEL3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL3_9FLOR)

HSP 1 Score: 306 bits (783), Expect = 7.220e-103
Identity = 132/201 (65.67%), Postives = 168/201 (83.58%), Query Frame = 0 
Query:    1 MLFQNLKMHGMVPVNYQLWDEPVHYDWYSREERCGPKALKTMMRINGSEVGDLGMRHRLMTSHRFAEVVYDKKLSLYQGEQHSIIGKTFVIKQGSDESSYSCATIYSSKLHSQRPGAIPCEVKQYSDCVVGATEEGECMLRSCYGYRQYWGLIDESTRMCAQIREVYPKRVEGSGNGNGVFPCIYGNHTLLRPIDSKAHLL 201
            +L +N+KM+G VP+NYQ+W+EPVHYDWY +EERC  KALKT+MR+ GS+VG+LGMRHRLMTS RFAEVVYDKKLSLY GE+H+IIGKTFV++QGS+ES Y CATIY + LHS RPGAIPCEV  YSDCV+G +    C+L+ CYGY+QYWG I+++T MC Q+ EVYPKR++ +   +G+  C +GNHTLLRP+D+KA L+
Sbjct:   59 LLLRNIKMNGHVPINYQIWEEPVHYDWYKKEERCSAKALKTVMRVGGSDVGNLGMRHRLMTSSRFAEVVYDKKLSLYDGEEHNIIGKTFVVQQGSNESDYRCATIYETTLHSLRPGAIPCEVGHYSDCVLGTSSNDTCVLKDCYGYKQYWGEINDNTVMCMQVHEVYPKRLDDAKRADGLVRCRHGNHTLLRPLDTKARLI 259
The following BLAST results are available for this feature:
BLAST of Gcaud8056.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEL3_9FLOR7.220e-10365.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyGENE3D2.60.40.200Superoxide dismutase, copper/zinc binding domaincoord: 22..114
e-value: 2.8E-9
score: 38.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1324_length_11389_cov_4.436360contigNODE_1324_length_11389_cov_4.436360:183..866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8056.t1Gcaud8056.t1Gracilaria caudata M_176_S67 malemRNANODE_1324_length_11389_cov_4.436360 183..866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8056.t1 ID=Gcaud8056.t1|Name=Gcaud8056.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=202bp
MLFQNLKMHGMVPVNYQLWDEPVHYDWYSREERCGPKALKTMMRINGSEV
GDLGMRHRLMTSHRFAEVVYDKKLSLYQGEQHSIIGKTFVIKQGSDESSY
SCATIYSSKLHSQRPGAIPCEVKQYSDCVVGATEEGECMLRSCYGYRQYW
GLIDESTRMCAQIREVYPKRVEGSGNGNGVFPCIYGNHTLLRPIDSKAHL
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036423SOD-like_Cu/Zn_dom_sf