Gcaud8046.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8046.t1
Unique Name	Gcaud8046.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	207

Homology

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BLAST of Gcaud8046.t1 vs. uniprot
Match: A0A2V3IYM3_9FLOR (Protein LURP-one-related 15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYM3_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 7.330e-30
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0

Query:   12 PSTASRSPLEQPTEYDVDIRSLSMSGE-FTINQLPDITPVFKLKRKNMSMHNVRFLYDLNDVALYKMENVSLTDLRYRTRIVDEQSGSTVFLLRRKGHLPGRGGNTIIAWQGDSEEGEPYLRVETGLLRRHFTVKEHATDKVVADARREKIGRG--------FVLRVEAGYDAALFVFFAIAADANYQD 191
            P  A+R    Q  E+ +     S SG+ F+I +      VFK+K    S  + + LYD++   +YKM    LT LR R +I+D  +   V  LR+K  +PG G +TI AW+G+++ G PY+ V+  + R+ FT+KE AT+++VA  RR              +VLR+E G DAAL VFF IA D  Y+D
Sbjct:  106 PPAAARFVFNQRVEFKIKENVFSFSGDSFSIKRTDTGEAVFKVKGNAFSFKDSKSLYDMHGNPIYKMVESILT-LRGRMQILDAATKRPVITLRKKSFIPGFGNSTISAWRGETDSGSPYIEVKGDIFRKDFTIKELATNRIVATVRRRSFTLSNLLLEKDSYVLRIEPGIDAALIVFFVIAVDEQYRD 293

The following BLAST results are available for this feature:

BLAST of Gcaud8046.t1 vs. uniprot

BLAST of Gcaud8046.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYM3_9FLOR	7.330e-30	38.10	Protein LURP-one-related 15 n=1 Tax=Gracilariopsis...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038595	LURP-one-related superfamily	GENE3D	2.40.160.200		coord: 17..194 e-value: 1.5E-15 score: 59.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 21..187

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1800_length_8346_cov_3.892065	contig	NODE_1800_length_8346_cov_3.892065:6652..7272 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8046.t1	Gcaud8046.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1800_length_8346_cov_3.892065 6652..7272 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8046.t1 ID=Gcaud8046.t1|Name=Gcaud8046.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=207bp
MSAAPEQVSPPPSTASRSPLEQPTEYDVDIRSLSMSGEFTINQLPDITPV
FKLKRKNMSMHNVRFLYDLNDVALYKMENVSLTDLRYRTRIVDEQSGSTV
FLLRRKGHLPGRGGNTIIAWQGDSEEGEPYLRVETGLLRRHFTVKEHATD
KVVADARREKIGRGFVLRVEAGYDAALFVFFAIAADANYQDSHVASSSAA
SGSGAY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038595	LOR_sf
IPR025659	Tubby-like_C