Gcaud8031.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8031.t1
Unique NameGcaud8031.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length431
Homology
BLAST of Gcaud8031.t1 vs. uniprot
Match: A0A2V3IGH7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH7_9FLOR)

HSP 1 Score: 259 bits (661), Expect = 2.390e-77
Identity = 231/433 (53.35%), Postives = 276/433 (63.74%), Query Frame = 0
Query:    1 MSDADLEAELAARRAARARERERYAKAMRSEKLAVLESELLRLRSEISRMDRATPLGGGTPPTARWEALPNDRRSSRNARSRQGAYPSSSPLGSPPLSSAP-PPAAMPARSAPGAXXXXXXXXXXXXXXDPEKQKREKLXXXXXXXXXRKEREAAKKPVTLADIIRSAGPNPASRLKPSGSTPLPDVNEPPEDEKAAFANLKDTLKKTAP--TEQSNDQTSESDPEKKTEKAKADAPSPEDQDSKTAEDQSASPPASKEERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVHSNESATQPGGKSESXXXXXXXXXKSAQASERQDQVPASSEALPLPNGAQSHSNGPIPTDSTADQSSTKTSEDAXXXXXXXXXXXAKLPKKSSPATSSNDLKSNVSAPSSRRLSLEEKRRLRRAAKESAAAKED 430
            MSDADLEAELAARRAARARERERYAKAMR+EKLAVLE+ELLRLRSEISRMDR TPLGGGTPPTARWE+L NDRRS RN+RSR  AYP++SP GSPPL +AP              XXXXXXXXXXXXXX          XXXXXXXXX     A KKPVTLADII+SAGPNPASRLKPSGSTPLPDVNE  +DEK  FA+LKD+LKK  P  T+Q+ +   +SD +K  ++ + D P P DQ+ K  +    + P       XXXXXXXXXXXXXXXX                   D  + +S T    ++ +          ++  +E+       +   P  NG+Q H+NG   T++  + S +  S D            AKLPKK+S A    D  S  SAPS++RLSL+E+RRLRRAAKESA+ K+D
Sbjct:  111 MSDADLEAELAARRAARARERERYAKAMRTEKLAVLETELLRLRSEISRMDRGTPLGGGTPPTARWESLSNDRRSLRNSRSRTAAYPAASPTGSPPLGAAPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMKKPVTLADIIKSAGPNPASRLKPSGSTPLPDVNESEKDEKETFASLKDSLKKAEPENTQQNANDDGKSDAKKDPDEERKDNPKPADQE-KLPQPSKPNEPDKXXXXXXXXXXXXXXXXXXXXXSSQHDQKGTPEPVTPASIGDKPNTDSNTLTSTETPTPQTNGAKDSPTSTDAEKDSDTKLLNSTQP--NGSQPHANGAPSTEAQKESSESNVSTDFQNAATALSALSAKLPKKTSAAVPDTDANSADSAPSAKRLSLQERRRLRRAAKESASTKDD 540          
BLAST of Gcaud8031.t1 vs. uniprot
Match: R7Q6E6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6E6_CHOCR)

HSP 1 Score: 100 bits (248), Expect = 4.600e-19
Identity = 99/188 (52.66%), Postives = 116/188 (61.70%), Query Frame = 0
Query:    1 MSDADLEAELAARRAARARERERYAKAMRSEKLAVLESELLRLRSEISRMD-----RATPLGGGTPPTARWEALPNDRRSSRN-ARSRQG-AYPSSSPLGSPPLSSAPPPAA--MPARSAPGAXXXXXXXXXXXXXXDPEKQKREKLXXXXXXXXXRKEREAAKKPVTLADIIRSAGPNPASRLKPSG 179
            M+DA+LE          A+ERE Y++AMRS+KLA LESEL  LR EI R+D     RA     GTPP ARWEALP  RR S +   S  G AYP++  +  P   +  PP     P       XXXXXXXXXXX   DPEKQ+ EKL  XXXXXXX       KK +TLADIIR+AGP+PASRLKP+G
Sbjct:  134 MTDAELEXXXXXXXXXXAKEREAYSRAMRSDKLAALESELDSLRREIGRLDPPAPGRAPRQPAGTPPNARWEALPRSRRPSMSHGPSPPGFAYPNTPGVAGPTAGTPAPPVGGPPPXXXXXXXXXXXXXXXXXXAEVDPEKQRLEKLERXXXXXXXXXXXXXXKKKMTLADIIRAAGPDPASRLKPAG 321          
BLAST of Gcaud8031.t1 vs. uniprot
Match: A0A1X6P8E4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8E4_PORUM)

HSP 1 Score: 64.3 bits (155), Expect = 2.230e-7
Identity = 82/185 (44.32%), Postives = 94/185 (50.81%), Query Frame = 0
Query:    2 SDADLEAELAARRAARARERERYAKAMRSEKLAVLESELLRLRSEISRMD----RATPLGGGTPPTARWEALPNDRR----SSRNARSRQGAYPSSSPLGSPPLSSAPPPAAMPARSAPGAXXXXXXXXXXXXXXDPEKQKREKLXXXXXXXXXRKEREAAKKPVTLADIIRSAGPNPASRLKPS 178
            SDA+LEAELA RRAARA ERERY K + + KL+VLE EL RLR +I R+                       P+ RR    S   AR R  +                             XXXXXXXXXXXXXXD   ++REK          R E EAAKKPVTLADIIRSAGP+P   LKP+
Sbjct:  153 SDAELEAELATRRAARAAERERYGKRLDASKLSVLEGELRRLRGQIERIGGDGGXXXXXXXXXXXXXXXXXXPDGRRCRTVSLAPARGRMRSXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXDDATKEREKAERIARREAKRLEMEAAKKPVTLADIIRSAGPSPMRLLKPA 331          
BLAST of Gcaud8031.t1 vs. uniprot
Match: UPI001E1D2344 (protein enabled homolog n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2344)

HSP 1 Score: 59.7 bits (143), Expect = 4.960e-6
Identity = 81/210 (38.57%), Postives = 101/210 (48.10%), Query Frame = 0
Query:    1 MSDADLEAELAARRAARARERERYAKAMRSEKLAVLESELLRLRSEISRMDRATPLGG----------GTPPTARWEA--LPNDRRSSRNARSRQGAYPSSSPLGSPPLSSAPPPAAMPAR---SAPGAXXXXXXXXXXXXXXDPEKQKREKLXXXXXXXXXRKEREAAKKPVTLADIIRSAGPNPASRLKPSGSTPLPDVNEPPEDEKA 195
            +SD +LE  LA RR    RERERYA+A+R +KL  LE+EL  LR +I  MD A   GG          GTP    W++      +R S    SR+G   +S                       S  G               +PEK+K EK  XXXXXXXX   RE A++ +TLADIIR+AGP+P   LKP   TP P   +  E EKA
Sbjct:   15 LSDEELEKVLAERR----RERERYARALRKDKLGRLEAELANLRRDIGNMDAAA--GGPAAKLRSGARGTPARTDWDSGNPTQPKRGSLALASRRGHATASXXXXXXXXXXXXXXXXXXQSLEDSEEGEENCMEKHPVRPLVGNPEKRKMEKEEXXXXXXXXXXLREQAQEKLTLADIIRAAGPDPIKMLKPM--TPKPADLDKVEWEKA 216          
The following BLAST results are available for this feature:
BLAST of Gcaud8031.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IGH7_9FLOR2.390e-7753.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6E6_CHOCR4.600e-1952.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P8E4_PORUM2.230e-744.32Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
UPI001E1D23444.960e-638.57protein enabled homolog n=1 Tax=Mercenaria mercena... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableCOILSCoilCoilcoord: 135..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:57762..59054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8031.t1Gcaud8031.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 57762..59054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8031.t1 ID=Gcaud8031.t1|Name=Gcaud8031.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=431bp
MSDADLEAELAARRAARARERERYAKAMRSEKLAVLESELLRLRSEISRM
DRATPLGGGTPPTARWEALPNDRRSSRNARSRQGAYPSSSPLGSPPLSSA
PPPAAMPARSAPGAPPMPPPPPPELPALDPEKQKREKLERQRRREAKRKE
REAAKKPVTLADIIRSAGPNPASRLKPSGSTPLPDVNEPPEDEKAAFANL
KDTLKKTAPTEQSNDQTSESDPEKKTEKAKADAPSPEDQDSKTAEDQSAS
PPASKEERTDERKASKQDEPKEPATARKDSETTAKSDAQSLSEKDVHSNE
SATQPGGKSESHENESADEPKSAQASERQDQVPASSEALPLPNGAQSHSN
GPIPTDSTADQSSTKTSEDAKDAISALSALTAKLPKKSSPATSSNDLKSN
VSAPSSRRLSLEEKRRLRRAAKESAAAKED*
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