Gcaud8023.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8023.t1
Unique NameGcaud8023.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length461
Homology
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BLAST of Gcaud8023.t1 vs. uniprot
Match: A0A2V3IR12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR12_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 5.520e-17
Identity = 74/151 (49.01%), Postives = 84/151 (55.63%), Query Frame = 0 
Query:  312 SQIVKPSSAIPINDQPRQNSPTADLRPRETTSGTRSELEAHALYRSQISSRAPAPIHTYSKRRQNVQNFALPSRKSLGVRSRTSSGESPDSXXXXXXXXXXXXXXXXXXXXXXXXXXSDRE----DPALVSFIGQQRKLWAEIDNIDLEED 458
            SQ ++P     + D P   SP ++  PR  +       E  A  R   +S  PAP+HTYSKRR  VQ+ ALPSRKSLGVRSR SSG S  S                   XXXXXX SD E    D AL SFIGQQRK+W EIDNIDLEED
Sbjct:  345 SQNIQPER---VKDGPPDPSPASE--PRRLSFSP----EMPAPPRPPTASGLPAPLHTYSKRRHAVQDLALPSRKSLGVRSRASSGGSTGSASKSERGEAPLDEAESDVEXXXXXX-SDEESGKVDSALRSFIGQQRKMWDEIDNIDLEED 485
The following BLAST results are available for this feature:
BLAST of Gcaud8023.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR12_9FLOR5.520e-1749.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:24071..25453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8023.t1Gcaud8023.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 24071..25453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8023.t1 ID=Gcaud8023.t1|Name=Gcaud8023.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=461bp
MKTSRAPFTDVSNATSVVTRAKSRVQLSAKPSPQKTYKRARSVGRPKLDT
ENRLRNEPLSQATPVPVTPHPKREYIRKSMRTRTAQKPNASRIANDKHSE
KLSTPSSEQAKIPSETISLQMQSSSDPKHPQIEPAAFSTAERKSRDRSSP
RPTRDSKHVSADELPSQPKDASRPKSSQRNLSPPPLYPEDEIQPVVLQPK
TRQGGLPKRPPRPPSPPPLYPEDEIQPLPPKVKKQPAYGIRTKPSELTGS
LTSDRKFQPPRLSSPLPLALSHQPPTPPMPSSPVEKEEKNGKPALLNELS
TAEQVKHSKPKSQIVKPSSAIPINDQPRQNSPTADLRPRETTSGTRSELE
AHALYRSQISSRAPAPIHTYSKRRQNVQNFALPSRKSLGVRSRTSSGESP
DSKSSSAYDSQNDERDDDEDSEASEFEESDREDPALVSFIGQQRKLWAEI
DNIDLEEDLM*
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